MS013082 (gene) Bitter gourd (TR) v1

Overview


Name	MS013082
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Epidermal patterning factor-like protein
Location	scaffold459: 79446 .. 79670 (-)
RNA-Seq Expression	MS013082
Synteny	MS013082

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGCGGGCGGTGGCAGCGGGAGCTTGCAGGAGAAGACGGTGCTGGGGTCGAAGCCGCCGCAATGCATCGGGAAGTGCTTGAATTGCCGGCCCTGCTCGGCGACCCTGGTGGTGCCTGAGCACCGTGAGAGGAAGGGATTCGAACCTCTGACTCGTAGAGAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGCAGATGTGGGAATAAGCTTTATCAGCCT

mRNA sequence

GCGGCGGGCGGTGGCAGCGGGAGCTTGCAGGAGAAGACGGTGCTGGGGTCGAAGCCGCCGCAATGCATCGGGAAGTGCTTGAATTGCCGGCCCTGCTCGGCGACCCTGGTGGTGCCTGAGCACCGTGAGAGGAAGGGATTCGAACCTCTGACTCGTAGAGAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGCAGATGTGGGAATAAGCTTTATCAGCCT

Coding sequence (CDS)

GCGGCGGGCGGTGGCAGCGGGAGCTTGCAGGAGAAGACGGTGCTGGGGTCGAAGCCGCCGCAATGCATCGGGAAGTGCTTGAATTGCCGGCCCTGCTCGGCGACCCTGGTGGTGCCTGAGCACCGTGAGAGGAAGGGATTCGAACCTCTGACTCGTAGAGAAGAAGATGATAGCTATTATCTTCTGCATTGGAAATGCAGATGTGGGAATAAGCTTTATCAGCCT

Protein sequence

AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP

Homology

[Close]

BLAST of MS013082 vs. NCBI nr
Match: XP_022153574.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 3.6e-37
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1   AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYY 60
           AAGGG GSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRRE+DDSYY
Sbjct: 32  AAGGGGGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREKDDSYY 91

Query: 61  LLHWKCRCGNKLYQP 76
           LLHWKCRCGNKLYQP
Sbjct: 92  LLHWKCRCGNKLYQP 106

[Close]

BLAST of MS013082 vs. NCBI nr
Match: XP_023525861.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 4.7e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYY 61
           A GG  SL +K VLGSKPP+CIGKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYY
Sbjct: 33  AAGGGESLWKKMVLGSKPPRCIGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYY 92

Query: 62  LLHWKCRCGNKLYQP 76
           LLHWKC+CGNKLYQP
Sbjct: 93  LLHWKCKCGNKLYQP 107

[Close]

BLAST of MS013082 vs. NCBI nr
Match: XP_022998271.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima])

HSP 1 Score: 137.1 bits (344), Expect = 6.2e-29
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYY 61
           A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYY
Sbjct: 33  AAGGGESLWKKMVLGSKPPRCVGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYY 92

Query: 62  LLHWKCRCGNKLYQP 76
           LLHWKC+CGNKLYQP
Sbjct: 93  LLHWKCKCGNKLYQP 107

[Close]

BLAST of MS013082 vs. NCBI nr
Match: XP_022948690.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata])

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYY 61
           A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYY
Sbjct: 33  AVGGGESLWKKMVLGSKPPRCVGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYY 92

Query: 62  LLHWKCRCGNKLYQP 76
           LLHWKC+CGNKLYQP
Sbjct: 93  LLHWKCKCGNKLYQP 107

[Close]

BLAST of MS013082 vs. NCBI nr
Match: KAG6606797.1 (EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036508.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYY 61
           A GG  SL +K VLGSKPP+C+GKCLNCRPC A+LVVPEHRERKGFE  L RREEDDSYY
Sbjct: 33  AVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYY 92

Query: 62  LLHWKCRCGNKLYQP 76
           LLHWKC+CGNKLYQP
Sbjct: 93  LLHWKCKCGNKLYQP 107

[Close]

BLAST of MS013082 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06
Identity = 26/61 (42.62%), Postives = 30/61 (49.18%), Query Frame = 0


Query: 15  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQ 74
           LGS PP+C  KC  C PC      P H       P+T       YY   W+C+CGNKLY 
Sbjct: 106 LGSSPPRCSSKCGRCTPCK-----PVHVPVPPGTPVTA-----EYYPEAWRCKCGNKLYM 156

Query: 75  P 76
           P
Sbjct: 166 P 156

[Close]

BLAST of MS013082 vs. ExPASy Swiss-Prot
Match: Q1G3V9 (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EPFL8 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.5e-06
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 5  GSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDS--YYLL 64
          G     +++V+GS+PP C  KC NC+PC     +P   + +G       ++DDS  YY +
Sbjct: 36 GHQQRMKESVMGSEPPVCATKCRNCKPC-----LPYLFDIRG----AHDDDDDSEPYYPV 95

Query: 65 HWKCRCGNKLYQP 76
           W CRC +++++P
Sbjct: 96 KWICRCRDRVFEP 99

[Close]

BLAST of MS013082 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-05
Identity = 26/90 (28.89%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIG-KCLNCRPCSATLVVPEHRERKGFEPL---------- 61
           +G     +  + ++GS+PP+C   +C +C  C A + VP + + K   PL          
Sbjct: 40  SGDQDVKMMMRGLIGSRPPRCERVRCRSCGHCEA-IQVPTNPQTKLHSPLTTSSSSSSET 99

Query: 62  -----TRREEDDSYYLLHWKCRCGNKLYQP 76
                TR ++  +Y  + WKC+CGN +Y P
Sbjct: 100 IHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of MS013082 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.9e-05
Identity = 22/64 (34.38%), Postives = 27/64 (42.19%), Query Frame = 0


Query: 12  KTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNK 71
           + +LGS+PP C  KC  C PC A LV+              R     YY   W C    K
Sbjct: 463 RILLGSRPPNCTNKCHGCSPCKAKLVI------------VHRIMPQEYYPQRWMCSRHGK 514

Query: 72  LYQP 76
           +Y P
Sbjct: 523 IYHP 514

[Close]

BLAST of MS013082 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-04
Identity = 22/60 (36.67%), Postives = 27/60 (45.00%), Query Frame = 0


Query: 16  GSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP 75
           GS PP C  KC  C+PC    V  +       E          YY   W+C+CGNKL+ P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLE----------YYPEAWRCKCGNKLFMP 109

[Close]

BLAST of MS013082 vs. ExPASy TrEMBL
Match: A0A6J1DJG7 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111021046 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.7e-37
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1   AAGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYY 60
           AAGGG GSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRRE+DDSYY
Sbjct: 32  AAGGGGGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREKDDSYY 91

Query: 61  LLHWKCRCGNKLYQP 76
           LLHWKCRCGNKLYQP
Sbjct: 92  LLHWKCRCGNKLYQP 106

[Close]

BLAST of MS013082 vs. ExPASy TrEMBL
Match: A0A6J1K9T3 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492958 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.0e-29
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYY 61
           A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYY
Sbjct: 33  AAGGGESLWKKMVLGSKPPRCVGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYY 92

Query: 62  LLHWKCRCGNKLYQP 76
           LLHWKC+CGNKLYQP
Sbjct: 93  LLHWKCKCGNKLYQP 107

[Close]

BLAST of MS013082 vs. ExPASy TrEMBL
Match: A0A6J1GAL3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452285 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.7e-29
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYY 61
           A GG  SL +K VLGSKPP+C+GKCLNCRPC+A+LVVPEHRERKGFE  L RREEDDSYY
Sbjct: 33  AVGGGESLWKKMVLGSKPPRCVGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYY 92

Query: 62  LLHWKCRCGNKLYQP 76
           LLHWKC+CGNKLYQP
Sbjct: 93  LLHWKCKCGNKLYQP 107

[Close]

BLAST of MS013082 vs. ExPASy TrEMBL
Match: A0A5D3E1Z8 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001760 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.8e-27
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 8   SLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKC 67
           SLQ++TVLGSKPP+C+GKCLNCRPC+A LVVPEH ERK FE  L RREEDDSYYLLHWKC
Sbjct: 39  SLQKRTVLGSKPPRCVGKCLNCRPCTAALVVPEHLERKRFERNLDRREEDDSYYLLHWKC 98

Query: 68  RCGNKLYQP 76
           +CGNKLYQP
Sbjct: 99  KCGNKLYQP 107

[Close]

BLAST of MS013082 vs. ExPASy TrEMBL
Match: A0A1S3BZD4 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103494701 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.8e-27
Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 8   SLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFE-PLTRREEDDSYYLLHWKC 67
           SLQ++TVLGSKPP+C+GKCLNCRPC+A LVVPEH ERK FE  L RREEDDSYYLLHWKC
Sbjct: 39  SLQKRTVLGSKPPRCVGKCLNCRPCTAALVVPEHLERKRFERNLDRREEDDSYYLLHWKC 98

Query: 68  RCGNKLYQP 76
           +CGNKLYQP
Sbjct: 99  KCGNKLYQP 107

[Close]

BLAST of MS013082 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07
Identity = 26/61 (42.62%), Postives = 30/61 (49.18%), Query Frame = 0


Query: 15  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQ 74
           LGS PP+C  KC  C PC      P H       P+T       YY   W+C+CGNKLY 
Sbjct: 180 LGSSPPRCSSKCGRCTPCK-----PVHVPVPPGTPVTA-----EYYPEAWRCKCGNKLYM 230

Query: 75  P 76
           P
Sbjct: 240 P 230

[Close]

BLAST of MS013082 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07
Identity = 26/61 (42.62%), Postives = 30/61 (49.18%), Query Frame = 0


Query: 15  LGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQ 74
           LGS PP+C  KC  C PC      P H       P+T       YY   W+C+CGNKLY 
Sbjct: 106 LGSSPPRCSSKCGRCTPCK-----PVHVPVPPGTPVTA-----EYYPEAWRCKCGNKLYM 156

Query: 75  P 76
           P
Sbjct: 166 P 156

[Close]

BLAST of MS013082 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 3.2e-07
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 5  GSGSLQEKTVLGSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDS--YYLL 64
          G     +++V+GS+PP C  KC NC+PC     +P   + +G       ++DDS  YY +
Sbjct: 36 GHQQRMKESVMGSEPPVCATKCRNCKPC-----LPYLFDIRG----AHDDDDDSEPYYPV 95

Query: 65 HWKCRCGNKLYQP 76
           W CRC +++++P
Sbjct: 96 KWICRCRDRVFEP 99

[Close]

BLAST of MS013082 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 2.7e-06
Identity = 26/90 (28.89%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 2   AGGGSGSLQEKTVLGSKPPQCIG-KCLNCRPCSATLVVPEHRERKGFEPL---------- 61
           +G     +  + ++GS+PP+C   +C +C  C A + VP + + K   PL          
Sbjct: 40  SGDQDVKMMMRGLIGSRPPRCERVRCRSCGHCEA-IQVPTNPQTKLHSPLTTSSSSSSET 99

Query: 62  -----TRREEDDSYYLLHWKCRCGNKLYQP 76
                TR ++  +Y  + WKC+CGN +Y P
Sbjct: 100 IHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of MS013082 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-05
Identity = 22/60 (36.67%), Postives = 27/60 (45.00%), Query Frame = 0


Query: 16  GSKPPQCIGKCLNCRPCSATLVVPEHRERKGFEPLTRREEDDSYYLLHWKCRCGNKLYQP 75
           GS PP C  KC  C+PC    V  +       E          YY   W+C+CGNKL+ P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLE----------YYPEAWRCKCGNKLFMP 109

The following BLAST results are available for this feature:

BLAST of MS013082 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153574.1	3.6e-37	97.33	EPIDERMAL PATTERNING FACTOR-like protein 8 [Momordica charantia]	[more]
XP_023525861.1	4.7e-29	82.67	EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo]	[more]
XP_022998271.1	6.2e-29	81.33	EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima]	[more]
XP_022948690.1	1.4e-28	81.33	EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata]	[more]
KAG6606797.1	2.3e-28	81.33	EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subs...	[more]

BLAST of MS013082 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PEY6	2.0e-06	42.62	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1G3V9	4.5e-06	34.25	EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9T068	3.8e-05	28.89	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
P43212	4.9e-05	34.38	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]
Q2V3I3	1.9e-04	36.67	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of MS013082 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJG7	1.7e-37	97.33	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1K9T3	3.0e-29	81.33	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1GAL3	6.7e-29	81.33	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3E1Z8	2.8e-27	82.61	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BZD4	2.8e-27	82.61	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103494701...	[more]

BLAST of MS013082 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30370.1	1.4e-07	42.62	allergen-related	[more]
AT2G30370.2	1.4e-07	42.62	allergen-related	[more]
AT1G80133.1	3.2e-07	34.25	unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 prot...	[more]
AT4G37810.1	2.7e-06	28.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G14723.1	1.3e-05	36.67	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 14..75 e-value: 9.0E-20 score: 70.4
None	No IPR available	PANTHER	PTHR33109:SF57	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN	coord: 8..75
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 8..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013082.1	MS013082.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development