MS012922 (gene) Bitter gourd (TR) v1

Overview


Name	MS012922
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin-responsive protein
Location	scaffold38: 471063 .. 471455 (-)
RNA-Seq Expression	MS012922
Synteny	MS012922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAGAAGCAGAGGTTTTAGCCTCAAAATCAAGCTGCTGAAGATCTTCAAATGGAGGACCAACCCCTTCTCCAACCTCCTCGCCCTGGCCCGCCGCTCCCTCAAAACCCCACCCAAAACGCTGTCGTATTCTCGCGGATCCGGGTACATCCGAATGGGCGGGGTCTGGGCAGACCCGGCGGTGGCCCCGAAGGGGTATTTGGCCGTCCACGTCGGCGGGTCGGAGCACGAAACGGAGCGGCGTCTGGTGCCGGTGCTTTACTTCAACCATCCCATGTTCGGGAAATTGTTGGACGCGGCGGAGCGGATTTACGGGTTCGATTATCCGGGTCGGATCACGATTCCGTGCCACGTGTCGGAGTTTGAGGAGGTCAACAGAAGTATAGCGGCG

mRNA sequence

ATGCGAAGAAGCAGAGGTTTTAGCCTCAAAATCAAGCTGCTGAAGATCTTCAAATGGAGGACCAACCCCTTCTCCAACCTCCTCGCCCTGGCCCGCCGCTCCCTCAAAACCCCACCCAAAACGCTGTCGTATTCTCGCGGATCCGGGTACATCCGAATGGGCGGGGTCTGGGCAGACCCGGCGGTGGCCCCGAAGGGGTATTTGGCCGTCCACGTCGGCGGGTCGGAGCACGAAACGGAGCGGCGTCTGGTGCCGGTGCTTTACTTCAACCATCCCATGTTCGGGAAATTGTTGGACGCGGCGGAGCGGATTTACGGGTTCGATTATCCGGGTCGGATCACGATTCCGTGCCACGTGTCGGAGTTTGAGGAGGTCAACAGAAGTATAGCGGCG

Coding sequence (CDS)

ATGCGAAGAAGCAGAGGTTTTAGCCTCAAAATCAAGCTGCTGAAGATCTTCAAATGGAGGACCAACCCCTTCTCCAACCTCCTCGCCCTGGCCCGCCGCTCCCTCAAAACCCCACCCAAAACGCTGTCGTATTCTCGCGGATCCGGGTACATCCGAATGGGCGGGGTCTGGGCAGACCCGGCGGTGGCCCCGAAGGGGTATTTGGCCGTCCACGTCGGCGGGTCGGAGCACGAAACGGAGCGGCGTCTGGTGCCGGTGCTTTACTTCAACCATCCCATGTTCGGGAAATTGTTGGACGCGGCGGAGCGGATTTACGGGTTCGATTATCCGGGTCGGATCACGATTCCGTGCCACGTGTCGGAGTTTGAGGAGGTCAACAGAAGTATAGCGGCG

Protein sequence

MRRSRGFSLKIKLLKIFKWRTNPFSNLLALARRSLKTPPKTLSYSRGSGYIRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPCHVSEFEEVNRSIAA

Homology

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BLAST of MS012922 vs. NCBI nr
Match: TYK19488.1 (auxin-responsive protein SAUR32 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 90/140 (64.29%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 2   RRSRGFSLKIKLLKIFKWRT---------NPFSNLLALARRSLKTPPKTLSYSRGSGYIR 61
           RR++GF LKIKLLKIFKWRT         NPFS L +LA         T  +SR  GY R
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFDLHTYSNPFSKLFSLA---------TAPFSRRVGYAR 62

Query: 62  MGGVWADPAVA-PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPG 121
           +  V + PAVA PKGYLAVHVGG E ETER LVPV+YFNHPMF KLL AAE IYGFDYPG
Sbjct: 63  LNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPG 122

Query: 122 RITIPCHVSEFEEVNRSIAA 132
           RI IP  VSEFEEV   IAA
Sbjct: 123 RIVIPVDVSEFEEVKNGIAA 133

[Close]

BLAST of MS012922 vs. NCBI nr
Match: XP_008448892.1 (PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 90/140 (64.29%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 2   RRSRGFSLKIKLLKIFKWRT---------NPFSNLLALARRSLKTPPKTLSYSRGSGYIR 61
           RR++GF LKIKLLKIFKWRT         NPFS L +LA         T  +SR  GY R
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLA---------TAPFSRRVGYAR 62

Query: 62  MGGVWADPAVA-PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPG 121
           +  V + PAVA PKGYLAVHVGG E ETER LVPV+YFNHPMF KLL AAE IYGFDYPG
Sbjct: 63  LNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPG 122

Query: 122 RITIPCHVSEFEEVNRSIAA 132
           RI IP  VSEFEEV   IAA
Sbjct: 123 RIVIPVDVSEFEEVKNGIAA 133

[Close]

BLAST of MS012922 vs. NCBI nr
Match: KAG6596841.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028368.1 Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-34
Identity = 87/141 (61.70%), Postives = 95/141 (67.38%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKW----------RTNPFSNLLALARRSLKTPPKTLSYSRGSGY 60
           MRR+RGF LKIKLLKIFK            +NPFSNL +LA         T S+SR  GY
Sbjct: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLA---------TASFSRRLGY 60

Query: 61  IRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYP 120
            R+    + P   PKGYLAVHVGG E +TE  LVPV+YFNHPMFGKLL AAERIYGFDYP
Sbjct: 61  GRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYP 120

Query: 121 GRITIPCHVSEFEEVNRSIAA 132
           GRI IP  VSEFEEV   IAA
Sbjct: 121 GRIVIPVGVSEFEEVRNCIAA 132

[Close]

BLAST of MS012922 vs. NCBI nr
Match: XP_022946182.1 (auxin-responsive protein SAUR36-like [Cucurbita moschata])

HSP 1 Score: 155.6 bits (392), Expect = 2.9e-34
Identity = 87/141 (61.70%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKW----------RTNPFSNLLALARRSLKTPPKTLSYSRGSGY 60
           MRR RGF LKIKLLKIFK            +NPFSNL +LA         T S+SR  GY
Sbjct: 1   MRRVRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLA---------TASFSRRLGY 60

Query: 61  IRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYP 120
            R+    + P   PKGYLAVHVGG E +TE  LVPV+YFNHPMFGKLL AAERIYGFDYP
Sbjct: 61  GRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYP 120

Query: 121 GRITIPCHVSEFEEVNRSIAA 132
           GRI IP  VSEFEEV   IAA
Sbjct: 121 GRIVIPVGVSEFEEVRNCIAA 132

[Close]

BLAST of MS012922 vs. NCBI nr
Match: KAG6577610.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015657.1 Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 5.0e-34
Identity = 86/133 (64.66%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKWRT--NPFSNLLALARRSLKTPPKTLSYSRGSGYIRMGGVWA 60
           MR ++GF LKIKL KIFK RT  NPFS L ALA         T S+SR   Y R+  V  
Sbjct: 1   MRTTKGFRLKIKLPKIFKRRTTSNPFSKLFALA---------TASFSRPDAYSRLNRVRN 60

Query: 61  DP-AVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPC 120
            P A APKGYLAVHVGG+E E ER LVP++YFNHPMFGKLL AAERIYGF YPGRI IP 
Sbjct: 61  GPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPV 120

Query: 121 HVSEFEEVNRSIA 131
            VSEFEEV   IA
Sbjct: 121 DVSEFEEVTNCIA 124

[Close]

BLAST of MS012922 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-17
Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 45  SRGSGYIRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERI 104
           +R S YI +    ADP   P+G+LA++VG  + +  R LVP++YFNHP+FG+LL  AE+ 
Sbjct: 63  TRRSAYIPVDHKKADP--VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKE 122

Query: 105 YGFDYPGRITIPCHVSEFEEVNRSIAA 132
           YGF + G ITIPC  S+FE V   IA+
Sbjct: 123 YGFCHEGGITIPCLYSDFERVKTRIAS 147

[Close]

BLAST of MS012922 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 64  PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPCHVSEFE 123
           PKG LA+ VG    E +R +VPVLYFNHP+F +LL  AE  YGFD  G ITIPCHV EF 
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFR 84

Query: 124 EVNRSI 130
            V   I
Sbjct: 85  YVQALI 90

[Close]

BLAST of MS012922 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.6e-11
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 64  PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYP-GRITIPCHVSEF 123
           P+G++AV+VG ++ + +R +VPV Y N P+F +LL  +E  +G+D+P G +TIPCH S F
Sbjct: 22  PRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHESLF 81

Query: 124 EEVNRSI 130
             V   I
Sbjct: 82  FTVTSQI 88

[Close]

BLAST of MS012922 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 64  PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPCHVSEFE 123
           P+G++ V+VG   HE ER +V     NHP+F  LL  + + YG++  G + IPCHV  FE
Sbjct: 39  PEGHVPVYVG---HEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFE 98

Query: 124 EVNRSI 130
            +  S+
Sbjct: 99  RILESL 101

[Close]

BLAST of MS012922 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-07
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 64  PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPCHVSEFE 123
           P+G++ V+VG    E ER +V     NHP+F  LL+ + + YG++  G + IPCHV  FE
Sbjct: 51  PEGHVPVYVG---DEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 110

Query: 124 EVNRSI 130
            +  S+
Sbjct: 111 RIMESL 113

[Close]

BLAST of MS012922 vs. ExPASy TrEMBL
Match: A0A5D3D7D7 (Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001430 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.2e-37
Identity = 90/140 (64.29%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 2   RRSRGFSLKIKLLKIFKWRT---------NPFSNLLALARRSLKTPPKTLSYSRGSGYIR 61
           RR++GF LKIKLLKIFKWRT         NPFS L +LA         T  +SR  GY R
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFDLHTYSNPFSKLFSLA---------TAPFSRRVGYAR 62

Query: 62  MGGVWADPAVA-PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPG 121
           +  V + PAVA PKGYLAVHVGG E ETER LVPV+YFNHPMF KLL AAE IYGFDYPG
Sbjct: 63  LNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPG 122

Query: 122 RITIPCHVSEFEEVNRSIAA 132
           RI IP  VSEFEEV   IAA
Sbjct: 123 RIVIPVDVSEFEEVKNGIAA 133

[Close]

BLAST of MS012922 vs. ExPASy TrEMBL
Match: A0A1S3BLN7 (auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.2e-37
Identity = 90/140 (64.29%), Postives = 97/140 (69.29%), Query Frame = 0


Query: 2   RRSRGFSLKIKLLKIFKWRT---------NPFSNLLALARRSLKTPPKTLSYSRGSGYIR 61
           RR++GF LKIKLLKIFKWRT         NPFS L +LA         T  +SR  GY R
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLA---------TAPFSRRVGYAR 62

Query: 62  MGGVWADPAVA-PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPG 121
           +  V + PAVA PKGYLAVHVGG E ETER LVPV+YFNHPMF KLL AAE IYGFDYPG
Sbjct: 63  LNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPG 122

Query: 122 RITIPCHVSEFEEVNRSIAA 132
           RI IP  VSEFEEV   IAA
Sbjct: 123 RIVIPVDVSEFEEVKNGIAA 133

[Close]

BLAST of MS012922 vs. ExPASy TrEMBL
Match: A0A6J1G318 (auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC111450339 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34
Identity = 87/141 (61.70%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKW----------RTNPFSNLLALARRSLKTPPKTLSYSRGSGY 60
           MRR RGF LKIKLLKIFK            +NPFSNL +LA         T S+SR  GY
Sbjct: 1   MRRVRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLA---------TASFSRRLGY 60

Query: 61  IRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYP 120
            R+    + P   PKGYLAVHVGG E +TE  LVPV+YFNHPMFGKLL AAERIYGFDYP
Sbjct: 61  GRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYP 120

Query: 121 GRITIPCHVSEFEEVNRSIAA 132
           GRI IP  VSEFEEV   IAA
Sbjct: 121 GRIVIPVGVSEFEEVRNCIAA 132

[Close]

BLAST of MS012922 vs. ExPASy TrEMBL
Match: A0A6J1EBA0 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111431004 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 9.2e-34
Identity = 85/133 (63.91%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKWRT--NPFSNLLALARRSLKTPPKTLSYSRGSGYIRMGGVWA 60
           MR ++GF LKIKL  IFK RT  NPFS L ALA         T S+SR   Y R+  V  
Sbjct: 1   MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALA---------TASFSRPDAYSRLNRVRN 60

Query: 61  DP-AVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPC 120
            P A APKGYLAVHVGG+E E ER LVP++YFNHPMFGKLL AAERIYGF YPGRI IP 
Sbjct: 61  GPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPV 120

Query: 121 HVSEFEEVNRSIA 131
            VSEFEEV   IA
Sbjct: 121 DVSEFEEVTNCIA 124

[Close]

BLAST of MS012922 vs. ExPASy TrEMBL
Match: A0A0A0L5M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 84/140 (60.00%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 2   RRSRGFSLKIKLLKIFKWRT---------NPFSNLLALARRSLKTPPKTLSYSRGSGYIR 61
           R ++GF LK+KLLK+FKWRT         NPFS L +LA         T  +SR   Y R
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLA---------TDPFSRPVRYAR 62

Query: 62  MGGVWADPAVA-PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPG 121
           +  V + P VA PKGYLAVHVGG E+E ER LVPV+YFNHPMF KLL AAE IYGFDYPG
Sbjct: 63  LNRVRSTPPVATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPG 122

Query: 122 RITIPCHVSEFEEVNRSIAA 132
           RI IP  VSEFEEV   IAA
Sbjct: 123 RIVIPVDVSEFEEVKNGIAA 133

[Close]

BLAST of MS012922 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 8.8e-29
Identity = 66/148 (44.59%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKW-----------------RTNPFSNLLALARRSLKTPPKTLS 60
           M+R RGF +  + +KIFKW                   NP + + +LARR L+     L 
Sbjct: 1   MKRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCLRRGANRLC 60

Query: 61  YSRGSGYIRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAER 120
                G  R+G     P V P+G+L VHVG S  +T R +VPV+YFNHP+FG+LL+ AER
Sbjct: 61  GGMKPGQTRLGNEPKTPTV-PRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAER 120

Query: 121 IYGFDYPGRITIPCHVSEFEEVNRSIAA 132
           +YGF+ PGRI IPC VS+FE+V   IAA
Sbjct: 121 VYGFEQPGRIMIPCRVSDFEKVQMRIAA 147

[Close]

BLAST of MS012922 vs. TAIR 10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 8.8e-29
Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = 0


Query: 1   MRRSRGFSLKIKLLKIFKW---------RTNPFSNLLALARRSLKTPPKTLSYSR---GS 60
           M+R RGF +  + +KIFKW          TNP + + +LAR   +   +    S+   G 
Sbjct: 1   MKRVRGFKIGHRFVKIFKWIPRNRCPTRITNPVTGIRSLARCLSRGAKRLCGGSKKNPGQ 60

Query: 61  GYIRMGGVWADP----AVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERI 120
             IR+G    DP     V P+G+L VHVG S+ +T R +VPV+YFNHP+FG+LL+ AER+
Sbjct: 61  NQIRLG---KDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERV 120

Query: 121 YGFDYPGRITIPCHVSEFEEVNRSIAA 132
           +GFD PGRITIPC VS+FE+V   IAA
Sbjct: 121 HGFDQPGRITIPCRVSDFEKVQLRIAA 144

[Close]

BLAST of MS012922 vs. TAIR 10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 89.0 bits (219), Expect = 3.1e-18
Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 45  SRGSGYIRMGGVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERI 104
           +R S YI +    ADP   P+G+LA++VG  + +  R LVP++YFNHP+FG+LL  AE+ 
Sbjct: 63  TRRSAYIPVDHKKADP--VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKE 122

Query: 105 YGFDYPGRITIPCHVSEFEEVNRSIAA 132
           YGF + G ITIPC  S+FE V   IA+
Sbjct: 123 YGFCHEGGITIPCLYSDFERVKTRIAS 147

[Close]

BLAST of MS012922 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.0 bits (206), Expect = 1.0e-16
Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 64  PKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIYGFDYPGRITIPCHVSEFE 123
           PKG LA+ VG    E +R +VPVLYFNHP+F +LL  AE  YGFD  G ITIPCHV EF 
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFR 84

Query: 124 EVNRSI 130
            V   I
Sbjct: 85  YVQALI 90

[Close]

BLAST of MS012922 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 48  SGYIRMG--GVWADPAVAPKGYLAVHVGGSEHETERRLVPVLYFNHPMFGKLLDAAERIY 107
           SGYI +G   +   P   PKG+ AV++G  + + +R LVP++YFNHP+FG+LL  AE  +
Sbjct: 71  SGYIPIGQEPIREKPDPVPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEF 130

Query: 108 GFDYPGRITIPCHVSEFEEVNRSI 130
           GF   G ITIPC  S+F+ V   I
Sbjct: 131 GFSQEGGITIPCPYSDFKRVQTRI 154

The following BLAST results are available for this feature:

BLAST of MS012922 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK19488.1	1.1e-36	64.29	auxin-responsive protein SAUR32 [Cucumis melo var. makuwa]	[more]
XP_008448892.1	1.1e-36	64.29	PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]	[more]
KAG6596841.1	1.3e-34	61.70	Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022946182.1	2.9e-34	61.70	auxin-responsive protein SAUR36-like [Cucurbita moschata]	[more]
KAG6577610.1	5.0e-34	64.66	Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia]...	[more]

BLAST of MS012922 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22150	4.4e-17	49.43	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
Q9ZUZ3	1.4e-15	59.09	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q41220	3.6e-11	44.78	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
Q9SGU2	1.1e-07	40.91	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9LTV3	7.1e-07	39.39	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]

BLAST of MS012922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D7D7	5.2e-37	64.29	Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BLN7	5.2e-37	64.29	auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=...	[more]
A0A6J1G318	1.4e-34	61.70	auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1EBA0	9.2e-34	63.91	auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]
A0A0A0L5M2	1.2e-33	60.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1	[more]

BLAST of MS012922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22620.1	8.8e-29	44.59	SAUR-like auxin-responsive protein family	[more]
AT4G12410.1	8.8e-29	46.26	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	3.1e-18	49.43	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.0e-16	59.09	SAUR-like auxin-responsive protein family	[more]
AT3G60690.1	2.9e-16	46.43	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 59..127 e-value: 6.5E-18 score: 64.7
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 28..131
None	No IPR available	PANTHER	PTHR31374:SF201	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 28..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012922.1	MS012922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin