
MS012920 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGCAGGCAGATCTCCGTCGCGAACGCCGCCGTGGTCATCATTGCGGTGGTGGTGGCCGCCGCTGGCTTGGCGGCGGCGCAGATACCGGACTGTGCTGAGAAGTTGACGGCGTGCGCGTCGTTCTTGAAGTCCGATAACCCGCCGGCGTCGTGCTGCGATCCGATCAAGGAGGCGGTGGCGACGCAGCTCCCGTGCCTCTGCAACCTCTACACCTCGCCGGATTTCTTGCCATCGCTCGGCGTTAATCTCACCGACGCCATCCATCTCAGTAAAGCCTGCGGCGTCCCCGTCGATATCAATAAGTGCAAAAGT ATGGCTCGCAGGCAGATCTCCGTCGCGAACGCCGCCGTGGTCATCATTGCGGTGGTGGTGGCCGCCGCTGGCTTGGCGGCGGCGCAGATACCGGACTGTGCTGAGAAGTTGACGGCGTGCGCGTCGTTCTTGAAGTCCGATAACCCGCCGGCGTCGTGCTGCGATCCGATCAAGGAGGCGGTGGCGACGCAGCTCCCGTGCCTCTGCAACCTCTACACCTCGCCGGATTTCTTGCCATCGCTCGGCGTTAATCTCACCGACGCCATCCATCTCAGTAAAGCCTGCGGCGTCCCCGTCGATATCAATAAGTGCAAAAGT ATGGCTCGCAGGCAGATCTCCGTCGCGAACGCCGCCGTGGTCATCATTGCGGTGGTGGTGGCCGCCGCTGGCTTGGCGGCGGCGCAGATACCGGACTGTGCTGAGAAGTTGACGGCGTGCGCGTCGTTCTTGAAGTCCGATAACCCGCCGGCGTCGTGCTGCGATCCGATCAAGGAGGCGGTGGCGACGCAGCTCCCGTGCCTCTGCAACCTCTACACCTCGCCGGATTTCTTGCCATCGCTCGGCGTTAATCTCACCGACGCCATCCATCTCAGTAAAGCCTGCGGCGTCCCCGTCGATATCAATAAGTGCAAAAGT MARRQISVANAAVVIIAVVVAAAGLAAAQIPDCAEKLTACASFLKSDNPPASCCDPIKEAVATQLPCLCNLYTSPDFLPSLGVNLTDAIHLSKACGVPVDINKCKS Homology
BLAST of MS012920 vs. NCBI nr
Match: XP_023552770.1 (non-specific lipid transfer protein-like 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.9 bits (372), Expect = 4.9e-32 Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of MS012920 vs. NCBI nr
Match: XP_038876834.1 (non-specific lipid transfer protein GPI-anchored 8 [Benincasa hispida]) HSP 1 Score: 147.5 bits (371), Expect = 6.5e-32 Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 0
BLAST of MS012920 vs. NCBI nr
Match: XP_004147939.1 (lipid transfer-like protein VAS [Cucumis sativus] >KGN55906.1 hypothetical protein Csa_011723 [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31 Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of MS012920 vs. NCBI nr
Match: XP_022923450.1 (non-specific lipid transfer protein-like 1 [Cucurbita moschata]) HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30 Identity = 67/95 (70.53%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of MS012920 vs. NCBI nr
Match: KAG6577605.1 (hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30 Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of MS012920 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of MS012920 vs. ExPASy Swiss-Prot
Match: Q9LE56 (Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=3702 GN=LTPG3 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 7.2e-10 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of MS012920 vs. ExPASy Swiss-Prot
Match: Q6NLF7 (Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=3702 GN=LTPG7 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08 Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of MS012920 vs. ExPASy Swiss-Prot
Match: Q1G2Y5 (Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3702 GN=LTPG21 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05 Identity = 27/78 (34.62%), Postives = 40/78 (51.28%), Query Frame = 0
BLAST of MS012920 vs. ExPASy Swiss-Prot
Match: B3H587 (Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=3702 GN=LTPG8 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 31/103 (30.10%), Postives = 48/103 (46.60%), Query Frame = 0
BLAST of MS012920 vs. ExPASy TrEMBL
Match: A0A0A0L702 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G035840 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 9.1e-32 Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of MS012920 vs. ExPASy TrEMBL
Match: A0A6J1EBU7 (non-specific lipid transfer protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111431142 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.9e-31 Identity = 67/95 (70.53%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of MS012920 vs. ExPASy TrEMBL
Match: A0A5D3D7F6 (Non-specific lipid-transfer protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001390 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.5e-30 Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of MS012920 vs. ExPASy TrEMBL
Match: A0A6J1HJR7 (non-specific lipid transfer protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465138 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 5.5e-29 Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of MS012920 vs. ExPASy TrEMBL
Match: A0A1S3BK67 (non-specific lipid-transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103490924 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28 Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of MS012920 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of MS012920 vs. TAIR 10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 5.1e-11 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of MS012920 vs. TAIR 10
Match: AT1G62790.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09 Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of MS012920 vs. TAIR 10
Match: AT1G62790.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09 Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of MS012920 vs. TAIR 10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 8.5e-06 Identity = 31/103 (30.10%), Postives = 48/103 (46.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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