MS012914 (gene) Bitter gourd (TR) v1

Overview


Name	MS012914
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	C2H2-type domain-containing protein
Location	scaffold38: 409370 .. 410455 (+)
RNA-Seq Expression	MS012914
Synteny	MS012914

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGTTCATTAAATTCCGGAATTTACCGTGCAAATTCTGGAGCACCGTATTCACTAGACGTTTCCAGTCCGGAAGGAAACCGGCGGCGGATTCCTCCTTCTCTAACGTTGCTGTTTTCTGGGATTTGGATAATAAACCACCGAAATCGCTACCGCCTTATGAGGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTCGGCGTCGTTCGGTACTCGGCGGCGTATGCGAACCGCCATACATTTAGTCATGTGCCACAAGTTGTTAGGGAGCATAGAAGAGAGAGGAAGATGCTGAATCAATTGGAGAGAAAGGGTGTGATTAAATCGATTGAGCCGTATCTATGTCGAGTTTGCGGGAGGAATTTTTATACAAACGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCAGAAAAAGAGGTTGAATCAGATAGAGTCTGCTAAAGGTAGTAGAAAAGTGAAGTTGCTCGCCAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGTTAGGGATGTTTTGACTCCGAAGGTAGGATATGGATTGGGGGATGAGTTGAAGAGGGCGGGGTTTTTCGTGAAGACGGTATCGGATAAGCCAGAAGCGGCCGATGTAGCGTTGAGAAACGACATGGTTGAGATGATGGATAGGAGAAGAGCAGAGTGTCTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTGTTGAAGGAGGCCAAGTTGAGATGTCTCAGGACAGTTGTGGTAGGGGATGTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTGATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATAGAGATGTTTTGAAGAGATTGGAATGGACATATGATCCTCAATTGGAGAAGAAAGTGTCTGGTTTGGATGATATAATCGAGGATGAAGATGTTGAAGGTTCTGTTAATGGGGAAAATTGTGATGATGTGCAAAATGGTGACAGTGGTGTTTGGTGGGATCTCAGCTCTGATTCTGAAACTGAAATTGTTTCTTCATGTCCATGTAAA

mRNA sequence

ATGGCTTTGTTCATTAAATTCCGGAATTTACCGTGCAAATTCTGGAGCACCGTATTCACTAGACGTTTCCAGTCCGGAAGGAAACCGGCGGCGGATTCCTCCTTCTCTAACGTTGCTGTTTTCTGGGATTTGGATAATAAACCACCGAAATCGCTACCGCCTTATGAGGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTCGGCGTCGTTCGGTACTCGGCGGCGTATGCGAACCGCCATACATTTAGTCATGTGCCACAAGTTGTTAGGGAGCATAGAAGAGAGAGGAAGATGCTGAATCAATTGGAGAGAAAGGGTGTGATTAAATCGATTGAGCCGTATCTATGTCGAGTTTGCGGGAGGAATTTTTATACAAACGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCAGAAAAAGAGGTTGAATCAGATAGAGTCTGCTAAAGGTAGTAGAAAAGTGAAGTTGCTCGCCAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGTTAGGGATGTTTTGACTCCGAAGGTAGGATATGGATTGGGGGATGAGTTGAAGAGGGCGGGGTTTTTCGTGAAGACGGTATCGGATAAGCCAGAAGCGGCCGATGTAGCGTTGAGAAACGACATGGTTGAGATGATGGATAGGAGAAGAGCAGAGTGTCTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTGTTGAAGGAGGCCAAGTTGAGATGTCTCAGGACAGTTGTGGTAGGGGATGTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTGATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATAGAGATGTTTTGAAGAGATTGGAATGGACATATGATCCTCAATTGGAGAAGAAAGTGTCTGGTTTGGATGATATAATCGAGGATGAAGATGTTGAAGGTTCTGTTAATGGGGAAAATTGTGATGATGTGCAAAATGGTGACAGTGGTGTTTGGTGGGATCTCAGCTCTGATTCTGAAACTGAAATTGTTTCTTCATGTCCATGTAAA

Coding sequence (CDS)

ATGGCTTTGTTCATTAAATTCCGGAATTTACCGTGCAAATTCTGGAGCACCGTATTCACTAGACGTTTCCAGTCCGGAAGGAAACCGGCGGCGGATTCCTCCTTCTCTAACGTTGCTGTTTTCTGGGATTTGGATAATAAACCACCGAAATCGCTACCGCCTTATGAGGCTGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTCGGCGTCGTTCGGTACTCGGCGGCGTATGCGAACCGCCATACATTTAGTCATGTGCCACAAGTTGTTAGGGAGCATAGAAGAGAGAGGAAGATGCTGAATCAATTGGAGAGAAAGGGTGTGATTAAATCGATTGAGCCGTATCTATGTCGAGTTTGCGGGAGGAATTTTTATACAAACGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCAGAAAAAGAGGTTGAATCAGATAGAGTCTGCTAAAGGTAGTAGAAAAGTGAAGTTGCTCGCCAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGTTAGGGATGTTTTGACTCCGAAGGTAGGATATGGATTGGGGGATGAGTTGAAGAGGGCGGGGTTTTTCGTGAAGACGGTATCGGATAAGCCAGAAGCGGCCGATGTAGCGTTGAGAAACGACATGGTTGAGATGATGGATAGGAGAAGAGCAGAGTGTCTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTGTTGAAGGAGGCCAAGTTGAGATGTCTCAGGACAGTTGTGGTAGGGGATGTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTGATGGGGAAGGCTAAGAAGGAGGCTGTGTCTGTTGTGGGAAAATGGAAGGATAGAGATGTTTTGAAGAGATTGGAATGGACATATGATCCTCAATTGGAGAAGAAAGTGTCTGGTTTGGATGATATAATCGAGGATGAAGATGTTGAAGGTTCTGTTAATGGGGAAAATTGTGATGATGTGCAAAATGGTGACAGTGGTGTTTGGTGGGATCTCAGCTCTGATTCTGAAACTGAAATTGTTTCTTCATGTCCATGTAAA

Protein sequence

MALFIKFRNLPCKFWSTVFTRRFQSGRKPAADSSFSNVAVFWDLDNKPPKSLPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYDPQLEKKVSGLDDIIEDEDVEGSVNGENCDDVQNGDSGVWWDLSSDSETEIVSSCPCK

Homology

[Close]

BLAST of MS012914 vs. NCBI nr
Match: XP_022152760.1 (uncharacterized protein LOC111020404, partial [Momordica charantia])

HSP 1 Score: 606.7 bits (1563), Expect = 1.3e-169
Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0


Query: 52  LPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKS 111
           LPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKS
Sbjct: 1   LPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKS 60

Query: 112 IEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKY 171
           IEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKY
Sbjct: 61  IEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKY 120

Query: 172 KNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLV 231
           KNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLV
Sbjct: 121 KNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLV 180

Query: 232 SDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKW 291
           SDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNAD+GFSWKEILMGKAKKEAVSVVGKW
Sbjct: 181 SDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADSGFSWKEILMGKAKKEAVSVVGKW 240

Query: 292 KDRDVLKRLEWTYDPQLEKKVSGLDDIIEDEDVEGSVNGENCDDVQNGDSGVWWDLSSDS 351
           KDRDVLKRLEWTYDPQLEKKVSGLDDI EDEDVEGSVNGENCDDVQNGDSGVWWDLSSDS
Sbjct: 241 KDRDVLKRLEWTYDPQLEKKVSGLDDISEDEDVEGSVNGENCDDVQNGDSGVWWDLSSDS 300

Query: 352 ETEIVSSCPCK 363
           ETEIV SCPCK
Sbjct: 301 ETEIV-SCPCK 310

[Close]

BLAST of MS012914 vs. NCBI nr
Match: XP_022965083.1 (uncharacterized protein LOC111465052 [Cucurbita maxima])

HSP 1 Score: 583.9 bits (1504), Expect = 9.2e-163
Identity = 308/368 (83.70%), Postives = 326/368 (88.59%), Query Frame = 0


Query: 1   MALFIKFRNLPCKF-WSTVFTRRFQSG---RKPAADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  FI+FRNL  +F   T   RRF SG   +  + DSS S VA+FWDLDNKPPKSLPPYE
Sbjct: 8   MIAFIRFRNLSYQFRKETELIRRFHSGTNLKSNSPDSSCSAVAIFWDLDNKPPKSLPPYE 67

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFG VRY  AYANRH FS+VPQVVRE RRERKMLNQLERKGVIKSIEPYL
Sbjct: 68  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 127

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFYTNEKLVNHFKQIHESE KKRLNQIESAKGSR+VKLLAKYSMKIQKYKNA R
Sbjct: 128 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 187

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTPK GYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 188 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 247

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 248 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 307

Query: 301 LKRLEWTYDPQLEKKVSGLDDII-EDEDVE-GSVNGENCDDVQNGDSGVWWDLSSDSETE 360
           LKRLEWTY+PQLEK+V GLDD + EDEDVE GSV+    +++ NGDSG WWDL+SD+ETE
Sbjct: 308 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLNSDAETE 367

Query: 361 IVSSCPCK 363
            VSS  CK
Sbjct: 368 AVSSRSCK 371

[Close]

BLAST of MS012914 vs. NCBI nr
Match: KAG6577601.1 (hypothetical protein SDJN03_25175, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015649.1 hypothetical protein SDJN02_23286, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 582.8 bits (1501), Expect = 2.1e-162
Identity = 308/368 (83.70%), Postives = 324/368 (88.04%), Query Frame = 0


Query: 1   MALFIKFRNLPCKF-WSTVFTRRFQSG---RKPAADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  FI+FRNL   F   T   RRF SG   +  + DSS S VA+FWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFHFRKETELIRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFG VRY  AYANRH FS+VPQVVRE RRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFYTNEKLVNHFKQIHESE KKRLNQIESAKGSR+VKLLAKYSMKIQKYKNA R
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTPK GYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYDPQLEKKVSGLDDII-EDEDVE-GSVNGENCDDVQNGDSGVWWDLSSDSETE 360
           LKRLEWTY+PQLEK+V GLDD + EDEDVE GSV+    +++ NGDSG WWDL SD+ETE
Sbjct: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLRSDAETE 360

Query: 361 IVSSCPCK 363
            VSS  CK
Sbjct: 361 AVSSRSCK 364

[Close]

BLAST of MS012914 vs. NCBI nr
Match: XP_008448905.1 (PREDICTED: uncharacterized protein LOC103490929 [Cucumis melo])

HSP 1 Score: 582.8 bits (1501), Expect = 2.1e-162
Identity = 300/364 (82.42%), Postives = 323/364 (88.74%), Query Frame = 0


Query: 1   MALFIKFRNLPCKFWS-TVFTRRFQSGRKP---AADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  F++FRNL  KF + T   RRF SG  P   + DSS+S VA+FWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFG VRY  AYANRH FS+VPQVVRE +RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFY  EKLVNHFKQIHESE KKRLNQIESA+GSR+VKL+AKYSMKIQKYKNA R
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTP+VGYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYDPQLEKKVSGLDDIIEDED--VEGSVNGENCDDVQNGDSGVWWDLSSDSETE 359
           LKRLEWTY+PQLEK+VSGLDD I +ED   EGSV+G  C+ +QN D G WWDLSSD+ET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEEDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

[Close]

BLAST of MS012914 vs. NCBI nr
Match: TYK19480.1 (Zinc finger family protein [Cucumis melo var. makuwa])

HSP 1 Score: 582.0 bits (1499), Expect = 3.5e-162
Identity = 301/364 (82.69%), Postives = 325/364 (89.29%), Query Frame = 0


Query: 1   MALFIKFRNLPCKFWS-TVFTRRFQSGRKP---AADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  F++FRNL  KF + T   RRF SG  P   + DSS+S VA+FWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFG VRY  AYANRH FS+VPQVVRE +RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFY  EKLVNHFKQIHESE KKRLNQIESA+GSR+VKL+AKYSMKIQKYKNA R
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTP+VGYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYDPQLEKKVSGLDDII-EDEDV-EGSVNGENCDDVQNGDSGVWWDLSSDSETE 359
           LKRLEWTY+PQLEK+VSGLDD I ED++V EGSV+G  C+ +QN D G WWDLSSD+ET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEDDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

[Close]

BLAST of MS012914 vs. ExPASy TrEMBL
Match: A0A6J1DEV5 (uncharacterized protein LOC111020404 OS=Momordica charantia OX=3673 GN=LOC111020404 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 6.4e-170
Identity = 308/311 (99.04%), Postives = 309/311 (99.36%), Query Frame = 0


Query: 52  LPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKS 111
           LPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKS
Sbjct: 1   LPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKS 60

Query: 112 IEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKY 171
           IEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKY
Sbjct: 61  IEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKY 120

Query: 172 KNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLV 231
           KNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLV
Sbjct: 121 KNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLV 180

Query: 232 SDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKW 291
           SDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNAD+GFSWKEILMGKAKKEAVSVVGKW
Sbjct: 181 SDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADSGFSWKEILMGKAKKEAVSVVGKW 240

Query: 292 KDRDVLKRLEWTYDPQLEKKVSGLDDIIEDEDVEGSVNGENCDDVQNGDSGVWWDLSSDS 351
           KDRDVLKRLEWTYDPQLEKKVSGLDDI EDEDVEGSVNGENCDDVQNGDSGVWWDLSSDS
Sbjct: 241 KDRDVLKRLEWTYDPQLEKKVSGLDDISEDEDVEGSVNGENCDDVQNGDSGVWWDLSSDS 300

Query: 352 ETEIVSSCPCK 363
           ETEIV SCPCK
Sbjct: 301 ETEIV-SCPCK 310

[Close]

BLAST of MS012914 vs. ExPASy TrEMBL
Match: A0A6J1HMT7 (uncharacterized protein LOC111465052 OS=Cucurbita maxima OX=3661 GN=LOC111465052 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 4.5e-163
Identity = 308/368 (83.70%), Postives = 326/368 (88.59%), Query Frame = 0


Query: 1   MALFIKFRNLPCKF-WSTVFTRRFQSG---RKPAADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  FI+FRNL  +F   T   RRF SG   +  + DSS S VA+FWDLDNKPPKSLPPYE
Sbjct: 8   MIAFIRFRNLSYQFRKETELIRRFHSGTNLKSNSPDSSCSAVAIFWDLDNKPPKSLPPYE 67

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFG VRY  AYANRH FS+VPQVVRE RRERKMLNQLERKGVIKSIEPYL
Sbjct: 68  AAVKLKAAAASFGAVRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 127

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFYTNEKLVNHFKQIHESE KKRLNQIESAKGSR+VKLLAKYSMKIQKYKNA R
Sbjct: 128 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAAR 187

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTPK GYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 188 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSD 247

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 248 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 307

Query: 301 LKRLEWTYDPQLEKKVSGLDDII-EDEDVE-GSVNGENCDDVQNGDSGVWWDLSSDSETE 360
           LKRLEWTY+PQLEK+V GLDD + EDEDVE GSV+    +++ NGDSG WWDL+SD+ETE
Sbjct: 308 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVEQGSVD----ENMTNGDSGAWWDLNSDAETE 367

Query: 361 IVSSCPCK 363
            VSS  CK
Sbjct: 368 AVSSRSCK 371

[Close]

BLAST of MS012914 vs. ExPASy TrEMBL
Match: A0A1S3BKT2 (uncharacterized protein LOC103490929 OS=Cucumis melo OX=3656 GN=LOC103490929 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 9.9e-163
Identity = 300/364 (82.42%), Postives = 323/364 (88.74%), Query Frame = 0


Query: 1   MALFIKFRNLPCKFWS-TVFTRRFQSGRKP---AADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  F++FRNL  KF + T   RRF SG  P   + DSS+S VA+FWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFG VRY  AYANRH FS+VPQVVRE +RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFY  EKLVNHFKQIHESE KKRLNQIESA+GSR+VKL+AKYSMKIQKYKNA R
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTP+VGYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYDPQLEKKVSGLDDIIEDED--VEGSVNGENCDDVQNGDSGVWWDLSSDSETE 359
           LKRLEWTY+PQLEK+VSGLDD I +ED   EGSV+G  C+ +QN D G WWDLSSD+ET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEEDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

[Close]

BLAST of MS012914 vs. ExPASy TrEMBL
Match: A0A5D3D7P9 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001350 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.7e-162
Identity = 301/364 (82.69%), Postives = 325/364 (89.29%), Query Frame = 0


Query: 1   MALFIKFRNLPCKFWS-TVFTRRFQSGRKP---AADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  F++FRNL  KF + T   RRF SG  P   + DSS+S VA+FWDLDNKPPKSLPPY+
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLK AAASFG VRY  AYANRH FS+VPQVVRE +RERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFY  EKLVNHFKQIHESE KKRLNQIESA+GSR+VKL+AKYSMKIQKYKNA R
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTP+VGYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYDPQLEKKVSGLDDII-EDEDV-EGSVNGENCDDVQNGDSGVWWDLSSDSETE 359
           LKRLEWTY+PQLEK+VSGLDD I ED++V EGSV+G  C+ +QN D G WWDLSSD+ET+
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEDDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

[Close]

BLAST of MS012914 vs. ExPASy TrEMBL
Match: A0A6J1E6T9 (uncharacterized protein LOC111431136 OS=Cucurbita moschata OX=3662 GN=LOC111431136 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.9e-161
Identity = 304/368 (82.61%), Postives = 324/368 (88.04%), Query Frame = 0


Query: 1   MALFIKFRNLPCKF-WSTVFTRRFQSG---RKPAADSSFSNVAVFWDLDNKPPKSLPPYE 60
           M  FI+FRNL  +F   T   RRF SG   +  + DSS S VA+FWDLDNKPPKSLPPYE
Sbjct: 1   MIAFIRFRNLSFQFRKETELNRRFHSGTNLKSTSPDSSCSAVAIFWDLDNKPPKSLPPYE 60

Query: 61  AAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRERKMLNQLERKGVIKSIEPYL 120
           AAVKLKAAAASFG +RY  AYANRH FS+VPQVVRE RRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKAAAASFGAIRYMVAYANRHAFSYVPQVVREKRRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRKVKLLAKYSMKIQKYKNAVR 180
           CRVCGRNFYTNEKLVNHFKQIHESE  KRLNQIESAKGSR+VKLLAKYSMKIQKYKN  R
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHTKRLNQIESAKGSRRVKLLAKYSMKIQKYKNGAR 180

Query: 181 DVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMVEMMDRRRAECLVLVSDDSD 240
           DVLTPK GYGL DELKRAGFFVKTVSDKPEAADV LRNDMVE+MDRRRAECLVLVS+DSD
Sbjct: 181 DVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSNDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGD+NDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYDPQLEKKVSGLDDII-EDEDV-EGSVNGENCDDVQNGDSGVWWDLSSDSETE 360
           LKRLEWTY+PQLEK+V GLDD + EDEDV +GSV+    +++ NGDSG WWDLSSD+ETE
Sbjct: 301 LKRLEWTYNPQLEKEVFGLDDDMGEDEDVDQGSVD----ENMTNGDSGAWWDLSSDAETE 360

Query: 361 IVSSCPCK 363
            VSS  CK
Sbjct: 361 AVSSRSCK 364

[Close]

BLAST of MS012914 vs. TAIR 10
Match: AT4G12240.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 411.8 bits (1057), Expect = 5.8e-115
Identity = 207/330 (62.73%), Postives = 254/330 (76.97%), Query Frame = 0


Query: 38  VAVFWDLDNKPPKSLPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRER 97
           V V+WDLDNKPP S PPY+AAVKL+ AA+SFG V+   AYANRH FS+VP  VRE R++R
Sbjct: 40  VGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDR 99

Query: 98  KMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRK 157
           K+LN+LE KG++K  EPY C VC R FYTNEKL+NHFKQIHE+E +KR+ QIES+KG R+
Sbjct: 100 KLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRR 159

Query: 158 VKLLAKYSMKIQKYKNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMV 217
           V+L+AKYSMKI+KYK A R+VLTPK GYGL DELKRAGF+VK VSDKP+AAD AL+  +V
Sbjct: 160 VRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWVKMVSDKPDAADKALKEHLV 219

Query: 218 EMMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSWKEILM 277
           E+MD+R  EC+VLVSDDSDF  +L EAK RCLRTVV+GD N+G LKR AD  +SWKE+ M
Sbjct: 220 EVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTM 279

Query: 278 GKAKKEAVSVVGKWKDRDVLKRLEWTYDPQLEKKVSGLDDIIE-----DEDVEGSVNGEN 337
           GKAKKE   VVGKWKDRDVLK+LEWTYDP LEK+  G   + +     D+++E   NG  
Sbjct: 280 GKAKKEVEKVVGKWKDRDVLKKLEWTYDPALEKERGGSCGVWDYEFDYDDEIE---NGTE 339

Query: 338 CDDVQNGDSGVWWDLSSDSETEIVSSCPCK 363
            + V+ GD   WW +  D+E  + SS  C+
Sbjct: 340 VEPVEIGDGVDWWKI--DTEDGVGSSRTCR 364

[Close]

BLAST of MS012914 vs. TAIR 10
Match: AT5G52010.1 (C2H2-like zinc finger protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-56
Identity = 129/285 (45.26%), Postives = 173/285 (60.70%), Query Frame = 0


Query: 38  VAVFWDLDNKPPKSLPPYEAAVKLKAAAASFGVVRYSAAYANRHTFSHVPQVVREHRRER 97
           V V WDLDNKPP+  PPYEAA  L+  A   G V   +AYANRH F H+P  V E RRER
Sbjct: 76  VVVLWDLDNKPPRG-PPYEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVEERRER 135

Query: 98  KMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEQKKRLNQIESAKGSRK 157
           + L+ +ERKG +  I+PY+C VCGR   TN  L  HFKQ+HE E++K++N++ S KG ++
Sbjct: 136 RNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKR 195

Query: 158 VKLLAKYSMKIQKYKNAVRDVLTPKVGYGLGDELKRAGFFVKTVSDKPEAADVALRNDMV 217
            K   +Y    +KY  A R +LTPKVGYGL  EL+RAG +VKTV DKP+AAD A++  + 
Sbjct: 196 QKFKERYVSGNEKYNEAARSLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQ 255

Query: 218 EMMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDVNDGPLKRNADTGFSW----- 277
             M  R  + LVLVSDD DF ++L++A+   L T+VV D+ D  L R+AD    W     
Sbjct: 256 HSM-TRGIDWLVLVSDDKDFSDMLRKAREADLGTLVVSDM-DRALGRHADLWVPWSGVEK 315

Query: 278 -----KEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYDPQLEKKV 313
                K+++ GK  +     VG +   D L  L +  D + E  V
Sbjct: 316 GEIGEKDLIPGKRPRFEEDEVG-FGGNDELFSLSYDEDEKAEMTV 356

The following BLAST results are available for this feature:

BLAST of MS012914 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152760.1	1.3e-169	99.04	uncharacterized protein LOC111020404, partial [Momordica charantia]	[more]
XP_022965083.1	9.2e-163	83.70	uncharacterized protein LOC111465052 [Cucurbita maxima]	[more]
KAG6577601.1	2.1e-162	83.70	hypothetical protein SDJN03_25175, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008448905.1	2.1e-162	82.42	PREDICTED: uncharacterized protein LOC103490929 [Cucumis melo]	[more]
TYK19480.1	3.5e-162	82.69	Zinc finger family protein [Cucumis melo var. makuwa]	[more]

BLAST of MS012914 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS012914 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DEV5	6.4e-170	99.04	uncharacterized protein LOC111020404 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1HMT7	4.5e-163	83.70	uncharacterized protein LOC111465052 OS=Cucurbita maxima OX=3661 GN=LOC111465052...	[more]
A0A1S3BKT2	9.9e-163	82.42	uncharacterized protein LOC103490929 OS=Cucumis melo OX=3656 GN=LOC103490929 PE=...	[more]
A0A5D3D7P9	1.7e-162	82.69	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1E6T9	1.9e-161	82.61	uncharacterized protein LOC111431136 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]

BLAST of MS012914 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12240.1	5.8e-115	62.73	zinc finger (C2H2 type) family protein	[more]
AT5G52010.1	1.2e-56	45.26	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1010		coord: 32..275 e-value: 5.9E-8 score: 35.0
None	No IPR available	PANTHER	PTHR35744:SF4	ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN	coord: 18..354
None	No IPR available	PANTHER	PTHR35744	FAMILY NOT NAMED	coord: 18..354
None	No IPR available	CDD	cd18725	PIN_LabA-like	coord: 125..256 e-value: 1.00325E-58 score: 184.457
IPR021139	NYN domain, limkain-b1-type	PFAM	PF01936	NYN	coord: 189..267 e-value: 3.6E-9 score: 37.2
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 117..138
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 115..143 score: 12.362104
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 114..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012914.1	MS012914.1	mRNA