MS012909 (gene) Bitter gourd (TR) v1

Overview


Name	MS012909
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	peptidyl-tRNA hydrolase ICT1, mitochondrial
Location	scaffold38: 357046 .. 365209 (+)
RNA-Seq Expression	MS012909
Synteny	MS012909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTCATTAGAACCACCACAAACATCATCCTCCGAGAAATCCTTCACTCCCATCCCTGGTTTCCTCCGTCACCATCCCCTATCTTCCCTTCAACATTGCACAATCCCAACAATGGCGCTTTGCGATTCCGGCTTCGTGAAATCAGTTTCGGCCGCGTCCTATGCGCCTCTTCGGACTCAGGAGCCGGCAAGGTGTCTGCCCGGCTCTCGCAGGTTCAGCAGCTCCTGCAAGAAGCGGAGGAGCGAGCTCTTTCGGCTGACCGCGAACCCGCCCCTAAAATCACTCTCGGTACCTTCTAACCATTAACAGTTATGGCTTTTTGAGTTGCGTGATTGTAGAATTGAAATTCTAGTGGACTGGCTTCGTTTTAGTTCTAGTTCTGCTTTTGTAATATGGAAGTATATAGAAGAGAGAGCTTGATGGTTTACTGTCTTTGTGTTGATGAAGTCATTATTTCTTTACGTGGTAGCATAATTCGAATTCCCTGGGCCAATTAAGATTAGAGATGAACTACTGTGATCTGATTTTAACTGAAGTTGAAATCAGAGATTCAGAAATGAAGAGGGTCCTCCTGTCTATGTCCAAATAGTCTATTTCTCTAACCCCAAAGTTATGTGGTTTATTTGTCATGAGAGGGTTCGTAGGAGATCTTTGAAGAAATGGCCACCTCTCCCAAGACACGTTGGTAAGCCTTTGTTTCTATTTCTAGATGGTGAACTCATTCTAGGAGCTTTTGTAATCTCACCTCTTTTGACATTCAAGCCAATCTAATAGGTTTAGGCTAGCTAGGTAGATTGACTCTTCCTCCCCATTTTTGTAATCCTTCTTTCTCATTAACATATCATTTACTTCTTAAGAATAGTGTGGTATTAGAGCAAAGTCTTACAACATGCCAAAAGGAAAGGGAGGATGGAGGATGGAGAGTATGATGAAAGACATGGATTCTTGATTGGAAGAAATAGAACACGAGTTTGAAGCAGTGGGGAGGATATAAAAAAAGCTTTCAATGTTTTTTTTTTGTGAAAGAAACAATTTCATTGATGTATGAAATTACAAAAGCCTCATACTGAGGGATTACATGAAGCACTTCCAATTTGCTAAGAGGGAAGTGTAGCTATAGTAGTGAAACATAGGGGAGGATTTACACCAAGTTATGACTGTAAACACTATAGCTTCAAAAAAAGTATCAAAGGGGAGAGTTTTATCAGTAAAGATACGTTGGTTTCGTTCTCTCCAAAGGTTCCGAAAGAAAGCTCGCATGAAGTTTTGCCAAAGAATTGCCTTTTCCTTTTTGAAGGGGTGGCCTGTAAGAGTAACTTTGAGAAGGAGGGGGGATCGGTCGGTAGTGCAGTGGTCCACCCAAAAGTGCTAAGGATGCAGTTCCAAAAATTTGTTGCAAGTGACAATTGGTAAAGAGGTGTTGTTAGGTCTCATGGTTTGAATGACACATCACACACCACTGGGGAGAGAGAGCCATGTAGGGCATTCTCCTTTGAAGCTTATCACCGGCGTTGATTGCACGATGGCTAAGCTCCCAAAGGAAAATTTTCACTTTTTTTGGGTATGAGTCTCTCCAAATGCCCTCGTACAATTGCTGTGGGGTATTCGTGCAAGGCTGTGAGAGATCTTTAATAAGAGAGTAGGTAGAGTATATGCCATTTGTTTCTAATTTCCATGTTAGAGAATCTGCCTCTGTAGAAAAGCTAACAGTGGAGAGCTTGTGTGAGAGGGCTGCCTATTCTATAATTTCAGCATCCTTTAAATTCCTCCTCATCCGTAAATTCCAGCTATTGTTTTCTGTAGACCAGAGTTCACGAACATCAGCCTCTTTTTTCAAAGATAAGGCAAAAAGAAGAGGATAGTGATGTTCCAGCGGTTCATTGATCAACCATGAGACAGTCCAGAAGGTGTAGCGTTCCCGTCACCAATTTTGTAGATCAGTCTATCCAAAACCAGCTTCTGTGTTTTGAGGATCCCTTTCCAAAGCCCTTTTCCAGCGGGGAGTGATGTTGTGTTAGGCTTATGGGACCAGGATGAGCAACCATACTTAGAATCAATCACTGTATGCCACAAAGCCTTCTTTTCTTTAATATATCTCCAGATCATTTAGCAAGAAGGGCTTTGTTTTTCTGTTTCATGTTGGGCAAACCCAGTCCTCCCTCTAATAGCGGTTGTTGTGCAATGTCCCATCTGATCAAGTTCATCCTAGATGAATCCTTTGTGCCCTTCCAAAGAAAGTTTCTAAATAGGCTGTTTAAGGTGTTGGCTACTTTAGATGGTAGCGGAAACAGTGAAAGATAATAAGTAGGGAGGTTTGTAAGAGTAGCCTAGATGAGCGTGTGTCTACCTCCTTTGGAGATGAAGGAGTTTTTCCAAGAATGCAGTCTTTTCTTTACTTTCTCTATCATAGGGTCCCAAAAAGGAAGGGTTTTGGGCTTTCCATGAAGGGGAAGACCGAGGTAGAGAGTAGGCCAAACTCCAATTTTGCAGTTGAACTTAGTTGCAAGGGTGGAGAGCTCACTGTCATCAAGATTAATTCCCAAAATCTCAGATTTTTGGTGGCTGATTTTGAGCTCGGATGCCTCTTCAAATAATCGGCTGATGTTGAACATGTTGGTGAGGGAGGAGTCCTCAAAAGTGGAGAAGAGGATGGTGTCGCCTGCAAATTGGAGATGATGAATGTTCAGAGAATTTCCTCCAAGGTCAAATCCCTTAATGAGGTTGCTGCTAGCTGTCTGTGACATAAGGCGACTAATACCATCAGCAATCAAAATGAAGAGAAGGGGAGATAAAGGGTCACCTTGCCGAAGGCCTCTTGTTGCAATGATTTTCCCTCTCGGGCGGCCGTTTATAATTATAGAGAAGTTTGCAGAGGAAATACAGCCGTGGATCCACTTCCTCCAAGTGTGTCCGAACCCTTTAGCCTCTAAAACAACATCAAGGAATTCCCAATCAACACTATCAAAAGCTTTTTCAATATCCAATTTGATGACAACTCCCTTTTTTTGTCGCCTTTCACATTCCTCAATAAGCTCATTGGCAATCAGCGATGCATCAAGGATTTGTCTCCCAGCCACGAAGGCTGTTTGGGCGTCAGTGATAGTGTATGGCAGCACTCGCTTGAGTCTCTCGGAAAGAACCCTTGCTATAATCTTGTATAAACATGAGATGAGGCTTATAGGGCGAAAGTCCCCTACTTGCCTAGTGTCAATCTTCTTGGGAATGAGGCATACATACGTTTCGTTTAGGCTGGCGTTGATAATCCCATTCTTAAAAAAATCTTGGAATACACTCTCAAAATGTCGTCTTTGAGGATGTTCCAAAACTTTTTGTAGAATTCTGCAGTGAAGCCGTCTGGTCCAGGGGATCTATTAGTTCCTAATTCTTTGATAGCGATCCAAATCTCTTCTTCACTGAAGGGGGTCTCCAGGCCAGTGCTTTGTTGTTGGTTGATGGGACTCCAATTCAAGGGTTGTGGGAGGACTCTTTGTCCCTCTCTCTTGGAGTATAACCTATCAAAAAAAGAGAGAAATTCTTTTTCGATGTCATTTTCTTCAAAAAGGCTCGTACCATTCATGGAAAGAATTTCAGTGATGGTGTTCTTCCGTCTCTTCGATGCTACAATACGGTGGAAGAATGATGTGGTGTTGTCCCCCTCATGAAGCCACTTAGTTTTGCACCGTTGACGTCAGAGAATCTCTTCTTTAGCTACCACCTCAAGGAGATGTGTTTTAATGGATTTCCGCTGGATGCTTTGTACTGTGTTCAGGAGCCTTTCCTCTTCTAAGTCATCCAAAATAGCTAGCTCTGAAGTGAGATGGTGCTTTTGTTGTGCTATGTTACCAAAGGTTGTTTTGCTCCAAATTTTGATCACGGCCTTTAACCCTTTAAGCTTCATAGTGAAACCATGACCTGGCCAGCCTCTAAGGGTAGTGTTCTTCCACCAATATTCAATCAATGGAGGGAAAGAGTGGTGTTGCAGCCAAGCATTTTCGAATCTGAAGGGTGTGGGACCCCATTTTATCATGCCGAAAGACAAATGTAGAGGAAAGTGGTCGGATGTGGGGTGGCTCAGCCTTTTGACAGTCGCGTTCTGAAATTTCGACATAAAATCATTAGTAACCAAAAACCAGTCAATCAGAGTGAGGGTAGGAGGGTCCCTGTAGTCTGACCACGTGTAAAAGCCATTAGAAAGGGAGAGGTTTTGCAGACCAGCTGAATCGATAAAAGTGTTGAAGTGATGCATATTTCTGGTTGGCTTGCAATAAGATGATTTCTCGTGTGACCACCTGATCGAATTAAAATCACCTCCCAATAGCGAGGAGTCGGAGCAAAGGAAGGAGAGATCGGACAGCTCTCTCCAGTAAGCTGGCTTTTCCTTTGTTTTCGTAGGGCCATATACTCCTGTCAACCAGAACTTAGAATCGTCAAACAAAGTGAGAAGGATAGTAAGAGTGTAGAGCCCTACTGTGACATCAGAAACATGAAAGGAAGGGTCGTTCCACATGATCAGGATACCCCCTGATGTGGCCGAGGCATCGAGGGAAGTCCATCCAATGTCGCGGGAGCTCCACAACGACTTGATGGTGAGACGATCAACCACGTTCAGCTTTGTTTCCTGTAAGATGACAATGGTGGGGTTGTGTTTGTTGATGAGGGACTTAAAAAACCTTTCAATGTTAGAAAAGAATGTTATGTTGATGTCTGAATTGTTGCAAAATAGCAAAGATACAAAAAGACAGATGCTGATTCACAAGAAAGAGGAGCTATTGGTGGCAGGGAAATTTCAGCCAGTCAGGTTTTGATTGGAGAAAATGGTAACTCAAATGATATTTAGAGACAGAAAGTGCAATTACTTGAGAATGTGGGATTAAAATTAGAGTTACTAGCATTTGTGAGTGAACATTCCAAATGGTTGGTTTTTCATAGCAAGAAGATATTTTTGGCAATCTCGTAGTGAAAAAGAGAAATCAGAGGCTAAGGTTAGAAATGGTTAAATTTTCAGGTTTGTGTCTAATAGGTCTTTTAATTTGAACTTTGTGTCTAATTGTGTCTAATAGATCCCTGAACTTTCAATTTTGTGTGTAATAGGTATCTGAGCTTTAAAAGTGTTTAATAAGCTTTCAATTTTATGTCTAATAGGTCCTTGACATATTCTACATTTTTAAAATAAATGGATCGATTAAAAATTTATTGTCTAATAGGACCTTAAACTTTCAATTTTTTGACGGATAAGTTTGTGAGTTTTTTTGTTATTTTGTAACAAGAAACATCAAACTATTTCATTGATGTTTTGAAATACAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAACCTATGCCAAGGGAAACTAGAAAAAGAACCTCCAATTAACCAAAAATGTAGAAAACCTATTACTATGAAAGTATGATGAATTTTTACGGCAAGAAATAGCCAAAAAAAATTACACCATCCGTGAAGCTCTCATATGACTTCCAAATGTCTTTGAAGATACAGTTGTTTATTTCCATCCAAATAGATCAAAGAAAAGCTCTAATTAAATTGAGCCAAAGTTGCTTTTTCGAAGGAATTCGAAGAGAGATCTGAAGGAGTGCCTTAGCCTCGTCAAGTTCAAAGCTCTAATGAAATTGAGCCGAAGTGTCTCATTGACCTATTAAACAAAAACATAACATGTAATTTAACCCTCAGAAATTTAGATGGAGAACCCTGGTATGATATCAATGGGCCAATGGTTGAAGACCAGTGTGGAGTTTGCTGAGCTCAATACTCTTTTGCTGTTCTGTGGAGGTAAAATGTGTGAAAGGTCTCTTGAATCCAGATAGGAGAGGGGAGTGTGCACGAGTATAGGGAGGCAATTTGATTTCCTTGTGCCCCCGCTATCAGAGATATTGGGAGGAGGTTTTAGAAGGGAACTTGGTAAATGGGCTGGAACTTGAAATATGAGTTGAAATATGAATTGAAGTACAATGAAATATTTGTTTCATATCAAAAAAAAAAAAAAAAAAAAAAAAAANAAGAGTTGAAGTAAGGATGTTGAAGCCAATTGAACATGTAAAGATTATGTATTTAGCTGATAGAGTAAGGATCTTAAGGAATTGCACAGATGAGGAAACTTTAGCATCGATTTAGGGAAACACACAGAAATACATTATTGGTCCCACCATCTCATTGAGTTCAGCAACTTATTCCACAAGATTGTTGTCTTCAAAAAAGTTCAACCTCTTATTCCTGTTCTTTGTCCTGAATTACCAATAATGGCAAAAAAATATTCTTTTAATGTCCCACTAAAAACTTCTCTCTCCACTTAGAACATAAGCAGTTTTCCTTCCGTTGCAGCAGAATGTCAGTTGAGTGTTCAAGTCTTTCTTAATTCTTTATACGATTTAATTTCTCTATTAATTCTTGTTGACAAAGTTAGCTGCTAGGAGGATTTTGGTTCACAAACACCAAAATTCTTTGGTTAATATATCCTGAAAAGGAAAAAGTTATTTAAATTTCTTGTAGCTTCCTACCCTAAAAAGGGAATAATTTCAGCATTTTTCTAAGATGGTGTATGTGCTACGATTCCTGTCAGTCATTATCTTCATTACTTGTGTAATTTTTCTTTTCCTGTGTCTCCACCACAGACCATGTCACTGTGAATTTTGCGAGAAGTGGTGGCCCTGGAGGTCAGAATGTCAACAAAGGTCAGTTGATTTTCTTGGCTGCTGATTGGTTTTATTTCCACTTTAGAGTTGCTGTTTTCTTTATAAGTTATTATTTCCCTAAATGATAGTGCAGTGAACACAAAGGTTGACATGCGCTTTAATGTTAAAGATGCATATTGGCTGAGCGACAGAATCAGGGAAAGGATTATGCAAATGGTTTGTTACTCCAAAGTTCTATTGCATAATGGGGAAGTTTTACAAATATTTCTTTTCAGTCTCTAAGTTTCAAAATCTTACCATTTAAACTCTAATTTCTTTCAAATGGTTTGAATCGGTTTCTGTCAGTATATTAATGGGAAGCTGACTTGACAATCTATTAATTTTATGCTATGTGGCAATAATTAATTAAGTTTATAATATTTTTGAGTTTGATGTGGAAAAATATTAGAACCAGATCGTTTATTTCTTCTCTTTCTGCCGTCTCCCCCCCTCCCCTCCTCTCTCCTCTTCCCTCTTTTACTCCATCTCTCCCTCTCCTCTCGTTTATTCGAGTCAGCTTTTTTGTTACAGTAGCTTTCTGAAAAACTGGACAGGGCTATTTTTGAACTATTCGGAAATCGTAGGATTATTGTTAGTTTTTTAGATTTAGGGACCAAAGGCAAGTATTTGTGAAACCTACTTAAAGCTGTAAAAGCTAATATAGTTTCAGACTGAAAAATCGTTGAATCAATAGGTACGACTATGGAACAAAGGTGAAGGTTGATTGCATGTTTTTTTATGTACAAGTATTCATAATGTGTTCCCCTGTATGCTGCTAGCTAGAGCAGAAATAAAACTGGAGGTGGCTCGAGTGTTCATAAATCTGTCATCATGATATTGCTTCCTGTCTCTGTCTCTCCCTTGACATGAATATTTCTTCCTGCTTCTGAACAGGAGAAAAATAGGATCAACAAGGATGGGGAGCTTGTAATTTCATCCACTAAAACTAGAACACAGAAGTTAACTTCAGTCCTCTTTATTTTTCTTATTTTCCCCCATGTTCTACCAAAAAATTTTGTTTTGATTTTTCTTATTTTCCTCAGGGGCAACATTGAAGATGCCTTAGAGAAACTTCAGGTGCTTCGCCTTCCTATAAAATGCCTCTCCTTGTCCATCTAATAGAGAATATACGGAACATTCGTTTTCAATCAAAGAATTTGTTTGTATGAAACAGGCAATAATCGATGCTGCTTCTTATGTCCCACCACCTCCCTCTGAAGAGCAAAAGAAGAAAATTGCTAAGATGTGAGATCTTTCAACTTCCTTGGTTACTTAGTTTCAAAAAGTTTATGCACTTAATTAATACTCATATAATCTTTTGGTGTGGGGAGCTCCTGTGACTTATGAACTGTGGGGTAACATTTTTTGTATTTGTAAAGGGCTGCTATTGGGGAGCAGAAACGCCTTAAAAGCAAGAAGGTCCTCTCAGATAAGAAAGCCTTCCGAAGGAGTCGAGACAGTTGGGAT

mRNA sequence

ATGGCGGTCATTAGAACCACCACAAACATCATCCTCCGAGAAATCCTTCACTCCCATCCCTGGTTTCCTCCGTCACCATCCCCTATCTTCCCTTCAACATTGCACAATCCCAACAATGGCGCTTTGCGATTCCGGCTTCGTGAAATCAGTTTCGGCCGCGTCCTATGCGCCTCTTCGGACTCAGGAGCCGGCAAGGTGTCTGCCCGGCTCTCGCAGGTTCAGCAGCTCCTGCAAGAAGCGGAGGAGCGAGCTCTTTCGGCTGACCGCGAACCCGCCCCTAAAATCACTCTCGACCATGTCACTGTGAATTTTGCGAGAAGTGGTGGCCCTGGAGGTCAGAATGTCAACAAAGTGAACACAAAGGTTGACATGCGCTTTAATGTTAAAGATGCATATTGGCTGAGCGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATAGGATCAACAAGGATGGGGAGCTTGTAATTTCATCCACTAAAACTAGAACACAGAAGTTAACTTCAGTCCTCTTTATTTTTCTTATTTTCCCCCATGTTCTACCAAAAAATTTTGTTTTGATTTTTCTTATTTTCCTCAGGGGCAACATTGAAGATGCCTTAGAGAAACTTCAGGCAATAATCGATGCTGCTTCTTATGTCCCACCACCTCCCTCTGAAGAGCAAAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAGCAGAAACGCCTTAAAAGCAAGAAGGTCCTCTCAGATAAGAAAGCCTTCCGAAGGAGTCGAGACAGTTGGGAT

Coding sequence (CDS)

ATGGCGGTCATTAGAACCACCACAAACATCATCCTCCGAGAAATCCTTCACTCCCATCCCTGGTTTCCTCCGTCACCATCCCCTATCTTCCCTTCAACATTGCACAATCCCAACAATGGCGCTTTGCGATTCCGGCTTCGTGAAATCAGTTTCGGCCGCGTCCTATGCGCCTCTTCGGACTCAGGAGCCGGCAAGGTGTCTGCCCGGCTCTCGCAGGTTCAGCAGCTCCTGCAAGAAGCGGAGGAGCGAGCTCTTTCGGCTGACCGCGAACCCGCCCCTAAAATCACTCTCGACCATGTCACTGTGAATTTTGCGAGAAGTGGTGGCCCTGGAGGTCAGAATGTCAACAAAGTGAACACAAAGGTTGACATGCGCTTTAATGTTAAAGATGCATATTGGCTGAGCGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATAGGATCAACAAGGATGGGGAGCTTGTAATTTCATCCACTAAAACTAGAACACAGAAGTTAACTTCAGTCCTCTTTATTTTTCTTATTTTCCCCCATGTTCTACCAAAAAATTTTGTTTTGATTTTTCTTATTTTCCTCAGGGGCAACATTGAAGATGCCTTAGAGAAACTTCAGGCAATAATCGATGCTGCTTCTTATGTCCCACCACCTCCCTCTGAAGAGCAAAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAGCAGAAACGCCTTAAAAGCAAGAAGGTCCTCTCAGATAAGAAAGCCTTCCGAAGGAGTCGAGACAGTTGGGAT

Protein sequence

MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSDSGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRRSRDSWD

Homology

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BLAST of MS012909 vs. NCBI nr
Match: XP_022152820.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Momordica charantia])

HSP 1 Score: 434.5 bits (1116), Expect = 6.5e-118
Identity = 230/259 (88.80%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD
Sbjct: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60

Query: 61  SGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNT 120
           SGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNT
Sbjct: 61  SGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNT 120

Query: 121 KVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIFPH 180
           KVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQK             
Sbjct: 121 KVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQK------------- 180

Query: 181 VLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLK 240
                          GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLK
Sbjct: 181 ---------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLK 231

Query: 241 SKKVLSDKKAFRRSRDSWD 260
           SKK+LSDKKAFRRSRDSWD
Sbjct: 241 SKKILSDKKAFRRSRDSWD 231

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BLAST of MS012909 vs. NCBI nr
Match: XP_023551980.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023551981.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.3 bits (970), Expect = 5.5e-101
Identity = 208/261 (79.69%), Postives = 220/261 (84.29%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTN+ILREILHS P+FP S  P+FP+TL+N +N ALRFRLREISFGRV+CA+S+
Sbjct: 1   MAVIRTTTNMILREILHSQPYFPLSVPPVFPATLNN-SNAALRFRLREISFGRVICAASE 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQVQQLLQEAEERALSAD EPAPKITLDHVTVNFARSGGPGGQNVNKV
Sbjct: 61  SSGAGGKVSSRLSQVQQLLQEAEERALSADVEPAPKITLDHVTVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKVLSDKKAFRRSR SWD
Sbjct: 241 LKSKKVLSDKKAFRRSRGSWD 232

[Close]

BLAST of MS012909 vs. NCBI nr
Match: XP_038876872.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida] >XP_038876873.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida])

HSP 1 Score: 377.5 bits (968), Expect = 9.4e-101
Identity = 209/261 (80.08%), Postives = 217/261 (83.14%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           M VIRT TN+ILREILHS P+F  S  PIFP TLHNP N ALRFRLREISFGRVLCA+SD
Sbjct: 18  MTVIRTITNMILREILHSQPYFTLSSPPIFPITLHNP-NAALRFRLREISFGRVLCAASD 77

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQVQQLLQEAEERAL AD EPAPKITLDHVTVNFARSGGPGGQNVNKV
Sbjct: 78  SAGAGGKVSSRLSQVQQLLQEAEERALLADSEPAPKITLDHVTVNFARSGGPGGQNVNKV 137

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVKDAYWLS+RIRERI+QMEKNRINKDGELVISSTKTRTQK           
Sbjct: 138 NTKVDMRFNVKDAYWLSERIRERIIQMEKNRINKDGELVISSTKTRTQK----------- 197

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEE+KKKIAKMAAIGEQKR
Sbjct: 198 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEKKKKIAKMAAIGEQKR 249

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKVLSDKKAFRRSR+SWD
Sbjct: 258 LKSKKVLSDKKAFRRSRNSWD 249

[Close]

BLAST of MS012909 vs. NCBI nr
Match: XP_022965162.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita maxima] >XP_022965163.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-100
Identity = 208/261 (79.69%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTN+ILREILHS P+F  S  P+FP+TL+NP N ALRFRLREISFGRV+CA+S+
Sbjct: 1   MAVIRTTTNMILREILHSQPYFTLSVPPLFPATLNNP-NAALRFRLREISFGRVICAASE 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQVQQLLQEAEERALSAD EPAPKITLDHVTVNFARSGGPGGQNVNKV
Sbjct: 61  SSGAGGKVSSRLSQVQQLLQEAEERALSADDEPAPKITLDHVTVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKVLSDKKAFRRSR SWD
Sbjct: 241 LKSKKVLSDKKAFRRSRGSWD 232

[Close]

BLAST of MS012909 vs. NCBI nr
Match: XP_022923175.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita moschata] >XP_022923177.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita moschata] >KAG7015643.1 Peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-100
Identity = 208/261 (79.69%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTN+ILREILHS P+F  S  P+FP+TL+NP N ALRFRLREISFGRV+CA+S+
Sbjct: 1   MAVIRTTTNMILREILHSQPYFTLSVPPLFPATLNNP-NAALRFRLREISFGRVICAASE 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQVQQLLQEAEERALSAD EPAPKITLDHVTVNFARSGGPGGQNVNKV
Sbjct: 61  SSGAGGKVSSRLSQVQQLLQEAEERALSADVEPAPKITLDHVTVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKVLSDKKAFRRSR SWD
Sbjct: 241 LKSKKVLSDKKAFRRSRGSWD 232

[Close]

BLAST of MS012909 vs. ExPASy Swiss-Prot
Match: Q8R035 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl58 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16
Identity = 57/169 (33.73%), Postives = 93/169 (55.03%), Query Frame = 0


Query: 89  REPAPKITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKN 148
           ++ +  I LD +++++ RS GPGGQNVNKVN+K ++RF++  A W+ + +R++I    KN
Sbjct: 66  KQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKN 125

Query: 149 RINKDGELVISSTKTRTQKLTSVLFIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAI 208
           +INK GELV++S  +R Q                              N+ + L+K++ +
Sbjct: 126 KINKAGELVLTSESSRYQ----------------------------FRNLAECLQKIRDM 185

Query: 209 IDAASYVPPPPSEE----QKKKIAKMAAIGEQKRLKSKKVLSDKKAFRR 254
           I  AS VP  PS+E    Q+ +I KM     ++RL+ K++ S  K  RR
Sbjct: 186 IAEASQVPKEPSKEDARLQRLRIEKM----NRERLRQKRLNSALKTSRR 202

[Close]

BLAST of MS012909 vs. ExPASy Swiss-Prot
Match: B5XAM2 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar OX=8030 GN=mrpl58 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 83  RALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERI 142
           RA    ++    I +D +TV+++RS GPGGQ+VNKV+TK ++RF+V  A W+ + +R++I
Sbjct: 45  RASDNPQDGHVNIPVDRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVYTADWIPEDVRQKI 104

Query: 143 MQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIFPHVLPKNFVLIFLIFLRGNIEDAL 202
           +   KNRINK GEL+++S ++R+Q                            + N+ D +
Sbjct: 105 ILNNKNRINKAGELLVTSEQSRSQ----------------------------QRNMGDCI 164

Query: 203 EKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRR 254
           +K+  II  A+  P  PS E     A       ++RLK KK+ S  K  RR
Sbjct: 165 QKISDIIAKATEKPHEPSAEDIALRASRLEKRNKERLKQKKLHSAVKQTRR 187

[Close]

BLAST of MS012909 vs. ExPASy Swiss-Prot
Match: Q14197 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL58 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-16
Identity = 52/159 (32.70%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 95  ITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDG 154
           I LD +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R++I    KN+IN+ G
Sbjct: 72  IPLDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLG 131

Query: 155 ELVISSTKTRTQKLTSVLFIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASY 214
           EL+++S  +R Q                              N+ D L+K++ +I  AS 
Sbjct: 132 ELILTSESSRYQ----------------------------FRNLADCLQKIRDMITEASQ 191

Query: 215 VPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRR 254
            P  P++E  K          ++RL+ K++ S  K  RR
Sbjct: 192 TPKEPTKEDVKLHRIRIENMNRERLRQKRIHSAVKTSRR 202

[Close]

BLAST of MS012909 vs. ExPASy Swiss-Prot
Match: D2HD32 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca OX=9646 GN=MRPL58 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.6e-16
Identity = 52/159 (32.70%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 95  ITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDG 154
           I LD +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R+++  M KN+IN+ G
Sbjct: 72  IPLDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKMAIMHKNKINRSG 131

Query: 155 ELVISSTKTRTQKLTSVLFIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASY 214
           EL+++S  +R Q                              N+ D L+K++ +I  AS 
Sbjct: 132 ELILTSECSRYQ----------------------------FRNLADCLQKIRDMIAEASQ 191

Query: 215 VPPPPSEEQKKKIAKMAAIGEQKRLKSKKVLSDKKAFRR 254
            P  PS+E             ++RL+ K++ S  K  RR
Sbjct: 192 TPKEPSKEDAALHRIRIENMNRERLRKKRIHSAIKTGRR 202

[Close]

BLAST of MS012909 vs. ExPASy Swiss-Prot
Match: Q3T116 (Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus OX=9913 GN=MRPL58 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14
Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 0


Query: 95  ITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDG 154
           I +D +T+++ RS GPGGQNVNKVN+K ++RF++  A W+++ +R+++    KN+IN+ G
Sbjct: 72  IPVDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTHKNKINRAG 131

Query: 155 ELVISSTKTRTQKLTSVLFIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASY 214
           EL+++S  +R Q                              N+ D L+K++ +I  AS 
Sbjct: 132 ELILTSEYSRYQ----------------------------FRNLADCLQKIRDMIAEASQ 191

Query: 215 VPPPPSEE----QKKKIAKMAAIGEQKRLKSKKVLSDKKAFRR 254
               PS+E    QK +I  M     ++RL+ K++ S  K  RR
Sbjct: 192 PATEPSKEDAALQKLRIENM----NRERLRKKRINSAIKTSRR 202

[Close]

BLAST of MS012909 vs. ExPASy TrEMBL
Match: A0A6J1DF18 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020443 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.1e-118
Identity = 230/259 (88.80%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD
Sbjct: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60

Query: 61  SGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNT 120
           SGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNT
Sbjct: 61  SGAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKVNT 120

Query: 121 KVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIFPH 180
           KVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQK             
Sbjct: 121 KVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQK------------- 180

Query: 181 VLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLK 240
                          GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLK
Sbjct: 181 ---------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKRLK 231

Query: 241 SKKVLSDKKAFRRSRDSWD 260
           SKK+LSDKKAFRRSRDSWD
Sbjct: 241 SKKILSDKKAFRRSRDSWD 231

[Close]

BLAST of MS012909 vs. ExPASy TrEMBL
Match: A0A6J1HN26 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465103 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.9e-101
Identity = 208/261 (79.69%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTN+ILREILHS P+F  S  P+FP+TL+NP N ALRFRLREISFGRV+CA+S+
Sbjct: 1   MAVIRTTTNMILREILHSQPYFTLSVPPLFPATLNNP-NAALRFRLREISFGRVICAASE 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQVQQLLQEAEERALSAD EPAPKITLDHVTVNFARSGGPGGQNVNKV
Sbjct: 61  SSGAGGKVSSRLSQVQQLLQEAEERALSADDEPAPKITLDHVTVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKVLSDKKAFRRSR SWD
Sbjct: 241 LKSKKVLSDKKAFRRSRGSWD 232

[Close]

BLAST of MS012909 vs. ExPASy TrEMBL
Match: A0A6J1E5G6 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430949 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.7e-101
Identity = 208/261 (79.69%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTTTN+ILREILHS P+F  S  P+FP+TL+NP N ALRFRLREISFGRV+CA+S+
Sbjct: 1   MAVIRTTTNMILREILHSQPYFTLSVPPLFPATLNNP-NAALRFRLREISFGRVICAASE 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQVQQLLQEAEERALSAD EPAPKITLDHVTVNFARSGGPGGQNVNKV
Sbjct: 61  SSGAGGKVSSRLSQVQQLLQEAEERALSADVEPAPKITLDHVTVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVKDAYWLS+RIRE+IMQ EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKDAYWLSERIREKIMQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKVLSDKKAFRRSR SWD
Sbjct: 241 LKSKKVLSDKKAFRRSRGSWD 232

[Close]

BLAST of MS012909 vs. ExPASy TrEMBL
Match: A0A1S4DXZ3 (peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490933 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.2e-97
Identity = 202/261 (77.39%), Postives = 213/261 (81.61%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTT+NIILREILHS P+F  SP  IFP  LHNP N  L FRLR+ISFGRVLCA+SD
Sbjct: 1   MAVIRTTSNIILREILHSQPYFSLSPPSIFPKPLHNP-NATLPFRLRDISFGRVLCAASD 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQ+QQLL EAEERALSAD EPAPKITLDHV VNFARSGGPGGQNVNKV
Sbjct: 61  SPGTGGKVSSRLSQMQQLLLEAEERALSADSEPAPKITLDHVIVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVK+AYWLSDRIRE+I+Q EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKEAYWLSDRIREKILQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAK+AAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKV SDKKAFRRSR+SWD
Sbjct: 241 LKSKKVHSDKKAFRRSRNSWD 232

[Close]

BLAST of MS012909 vs. ExPASy TrEMBL
Match: A0A5D3D7B4 (Peptidyl-tRNA hydrolase ICT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001310 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.2e-97
Identity = 202/261 (77.39%), Postives = 213/261 (81.61%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPSPIFPSTLHNPNNGALRFRLREISFGRVLCASSD 60
           MAVIRTT+NIILREILHS P+F  SP  IFP  LHNP N  L FRLR+ISFGRVLCA+SD
Sbjct: 1   MAVIRTTSNIILREILHSQPYFSLSPPSIFPKPLHNP-NATLPFRLRDISFGRVLCAASD 60

Query: 61  S--GAGKVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGGQNVNKV 120
           S    GKVS+RLSQ+QQLL EAEERALSAD EPAPKITLDHV VNFARSGGPGGQNVNKV
Sbjct: 61  SPGTGGKVSSRLSQMQQLLLEAEERALSADSEPAPKITLDHVIVNFARSGGPGGQNVNKV 120

Query: 121 NTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVLFIFLIF 180
           NTKVDMRFNVK+AYWLSDRIRE+I+Q EKNRINKDGELVISSTKTRTQK           
Sbjct: 121 NTKVDMRFNVKEAYWLSDRIREKILQTEKNRINKDGELVISSTKTRTQK----------- 180

Query: 181 PHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAAIGEQKR 240
                            GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAK+AAIGEQKR
Sbjct: 181 -----------------GNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKR 232

Query: 241 LKSKKVLSDKKAFRRSRDSWD 260
           LKSKKV SDKKAFRRSR+SWD
Sbjct: 241 LKSKKVHSDKKAFRRSRNSWD 232

[Close]

BLAST of MS012909 vs. TAIR 10
Match: AT1G62850.2 (Class I peptide chain release factor )

HSP 1 Score: 275.8 bits (704), Expect = 3.6e-74
Identity = 166/267 (62.17%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPS----PIFPSTLHNPNNGALRFRLREISFGRVLC 60
           MA IRT TN+ILRE +H HP    S S     + P     P    +    R +S   V C
Sbjct: 1   MAAIRTMTNMILREFIH-HPLLLHSSSKSCQSLLPCLRLTPLISPIHSNSRLVS---VRC 60

Query: 61  ASSDSGAG----KVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGG 120
           A+S SG      KVS+RLSQVQQ+L EAEERA SA  EP P+ITLD+VT+NFARSGGPGG
Sbjct: 61  AASTSGGSGGDRKVSSRLSQVQQMLHEAEERASSAGNEPTPQITLDNVTLNFARSGGPGG 120

Query: 121 QNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVL 180
           QNVNK+NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELVISSTKTRTQK     
Sbjct: 121 QNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELVISSTKTRTQK----- 180

Query: 181 FIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAA 240
                                  GNI+DALEKLQAIIDAASYVPPPPSEEQKKKI K+AA
Sbjct: 181 -----------------------GNIDDALEKLQAIIDAASYVPPPPSEEQKKKIVKLAA 235

Query: 241 IGEQKRLKSKKVLSDKKAFRRSRDSWD 260
             + KRLKSKKVLSDKK+ RRSR S+D
Sbjct: 241 KADNKRLKSKKVLSDKKSARRSRGSYD 235

[Close]

BLAST of MS012909 vs. TAIR 10
Match: AT1G62850.3 (Class I peptide chain release factor )

HSP 1 Score: 275.8 bits (704), Expect = 3.6e-74
Identity = 166/267 (62.17%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MAVIRTTTNIILREILHSHPWFPPSPS----PIFPSTLHNPNNGALRFRLREISFGRVLC 60
           MA IRT TN+ILRE +H HP    S S     + P     P    +    R +S   V C
Sbjct: 1   MAAIRTMTNMILREFIH-HPLLLHSSSKSCQSLLPCLRLTPLISPIHSNSRLVS---VRC 60

Query: 61  ASSDSGAG----KVSARLSQVQQLLQEAEERALSADREPAPKITLDHVTVNFARSGGPGG 120
           A+S SG      KVS+RLSQVQQ+L EAEERA SA  EP P+ITLD+VT+NFARSGGPGG
Sbjct: 61  AASTSGGSGGDRKVSSRLSQVQQMLHEAEERASSAGNEPTPQITLDNVTLNFARSGGPGG 120

Query: 121 QNVNKVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKLTSVL 180
           QNVNK+NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELVISSTKTRTQK     
Sbjct: 121 QNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELVISSTKTRTQK----- 180

Query: 181 FIFLIFPHVLPKNFVLIFLIFLRGNIEDALEKLQAIIDAASYVPPPPSEEQKKKIAKMAA 240
                                  GNI+DALEKLQAIIDAASYVPPPPSEEQKKKI K+AA
Sbjct: 181 -----------------------GNIDDALEKLQAIIDAASYVPPPPSEEQKKKIVKLAA 235

Query: 241 IGEQKRLKSKKVLSDKKAFRRSRDSWD 260
             + KRLKSKKVLSDKK+ RRSR S+D
Sbjct: 241 KADNKRLKSKKVLSDKKSARRSRGSYD 235

The following BLAST results are available for this feature:

BLAST of MS012909 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152820.1	6.5e-118	88.80	peptidyl-tRNA hydrolase ICT1, mitochondrial [Momordica charantia]	[more]
XP_023551980.1	5.5e-101	79.69	peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_038876872.1	9.4e-101	80.08	peptidyl-tRNA hydrolase ICT1, mitochondrial [Benincasa hispida] >XP_038876873.1 ...	[more]
XP_022965162.1	1.2e-100	79.69	peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita maxima] >XP_022965163.1 p...	[more]
XP_022923175.1	1.6e-100	79.69	peptidyl-tRNA hydrolase ICT1, mitochondrial [Cucurbita moschata] >XP_022923177.1...	[more]

BLAST of MS012909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8R035	1.5e-16	33.73	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl58 P...	[more]
B5XAM2	2.5e-16	33.92	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Salmo salar OX=8030 GN=mrpl58 PE=...	[more]
Q14197	7.4e-16	32.70	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL58 PE...	[more]
D2HD32	9.6e-16	32.70	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Ailuropoda melanoleuca OX=9646 GN...	[more]
Q3T116	1.4e-14	32.52	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Bos taurus OX=9913 GN=MRPL58 PE=2...	[more]

BLAST of MS012909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DF18	3.1e-118	88.80	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1HN26	5.9e-101	79.69	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1E5G6	7.7e-101	79.69	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S4DXZ3	5.2e-97	77.39	peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490...	[more]
A0A5D3D7B4	5.2e-97	77.39	Peptidyl-tRNA hydrolase ICT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of MS012909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62850.2	3.6e-74	62.17	Class I peptide chain release factor	[more]
AT1G62850.3	3.6e-74	62.17	Class I peptide chain release factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..90
None	No IPR available	GENE3D	3.30.160.20		coord: 89..170 e-value: 5.2E-28 score: 99.5 coord: 194..257 e-value: 1.8E-7 score: 33.0
None	No IPR available	PANTHER	PTHR47352:SF1	CLASS I PEPTIDE CHAIN RELEASE FACTOR	coord: 195..259 coord: 1..167
None	No IPR available	PANTHER	PTHR47352	CLASS I PEPTIDE CHAIN RELEASE FACTOR	coord: 195..259 coord: 1..167
None	No IPR available	SUPERFAMILY	110916	Peptidyl-tRNA hydrolase domain-like	coord: 92..166
IPR000352	Peptide chain release factor class I	PFAM	PF00472	RF-1	coord: 94..167 e-value: 2.8E-10 score: 40.2
IPR000352	Peptide chain release factor class I	PROSITE	PS00745	RF_PROK_I	coord: 106..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012909.1	MS012909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006415	translational termination
molecular_function	GO:0003747	translation release factor activity