MS012884 (gene) Bitter gourd (TR) v1

Overview


Name	MS012884
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Copper chaperone for superoxide dismutase
Location	scaffold38: 89268 .. 94463 (+)
RNA-Seq Expression	MS012884
Synteny	MS012884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAGCTAGAAATTCCTTCGGATTTATCACAACCTTTGCCCATTCACCTTCTGCTGTTCCCATGGCGGCACCCACTTCGGAACCAACCTCTTTCTCTCAGGTTCCCTTTCATTTCTTAAACCCATCTCCAATTTCTGTTATCAATCATGTCTCATTTCTAATGCCCCTCAATTGGTTGTTGATTGATGCAGAACAACGTTGGATTGCCTGAACTTCTGGTGAGTCTAGTTCTTCAAATTTCTCCTGATTCTTTAACAATTTTTCTCTGTGTTGTCTCCACAGTTTATGTTTTTTTTATATCCCTTTTGTGGGTGTATGTTTTATCTTGTATCTTTCATTTTCTGAAAAGGAACTCTACTGGTTAAAATGCTTAAGGGGTGTTTTAGATATTATTTTAATATGAGAATCTGGGTCCACGTTGGGAATTTACTAAAGTAAGCTGCTTAGTTTGTCGTTTAGAACAATAAACTTTAACCATCTGGTTTTGTTGGGGTGACAGACAGAGTATATGGTGGATATGAAATGTGAGGGCTGCGTTAATGCTGTCAAGGACAAGTTACAGGGTGTTGATGGTAAGTGTCTCAGAGGAAGATTTTGTTATTTAATTTAATGTTCAAGTTTCCGTTGTTAGTCGTTCCAACTTTTGGTTGGTTTCTTACTTCTTATTAAGCTTTTGACAAGGTTGAAGAACTTTTGTTATGGCCAAAAGCACTTTTCATTCAAAATTTTTATATTTTTAAGTAATCAGAAGTGTTTTGGACTACTAAAGCACATTTGTTATGCCCAAAAGCACTTTCCATTCAAAATTTTTTTGTTTGGAAGAAATAAGAAGTGTTTTGGACTACTAATGCACTTGTACAGTGCTTTTGATCCGAGTAGTTGAATTAGAAGCAGTTGATAAACACTTCGTAGAACTGAGTCTCAAAATGATTTCTCATCAAACACTTTTTAATAATTTTGGAGTAATTTTATTTTTGTACTAAAAAAAAAACTTTTGGAGCACTTCTACACATTAGGTGCTTTTATGTTGTTTCAGGTGTAAAGAATGTTGATGTGGACTTGAGCAATCAAGTGGTTAGGATACTGGGCACAACACCTGTGAAGACAATGACCGAAGCTTTGGAGCAGACAGGTCGAAAAGCCCGGTTAATTGGGCAAGGGGTCCCTGAGGGTACGTCTAACTAAGCTTACGCTTACCCCCTCCTCTCAATGTGATAGTTAGATGTTTTTTGATGATAAAAGCTTCTTGAATTTTTTGGATTCCTGAATATTTTCACAAGTGTATGTTGCTTCCGGGAATCATTGGAATTGATTGGTAGATATTCCCTCCTTTTATTTAATTGATCTTTATTACAAATATGTTCAAAAAATGGCTTCAGCTTCTTATTCTAAGCACTGATGTGGATGGGTGAAATGTTTCACTGTGTACGTATGCTGTGAGGTACTAATTGCTTTCTTGTGTGAATGGTCCTAGTACACTTTTTGATTGATAAACCCTTTCTTTAATGAGAATTGATCAATTTTTTCTTAATAGAAATCCTACTTTCATTAGATGAAATAAAAGCACAAAACAGGGGCTGTACCACACACAAGCTGAAGACGAAGGAGCCATCAAAAAATAAGATGAAAATTACACACTGACTCTTGTTATGATTCAATAATAAGGAAAAATCAAAATATAACTCAGTCGAAATGGTTGAAAGAGATGTTTTAAGAGTGAGCCAGACCCCAAATCTCTTCCTGTGATCCCTTATCACATAAAAGTCTTCTTGTTCCTTTCTAGCCATAATAAAAATGATAACAAAAAGGACCCATTTACCAAAAGAGCGTCCTTATTTTTATTTCTTTTTAATATCCGTGAGCGTCCTTCTGTTTTGAAAAGGAGGGTTCAGTAGAACTTCCGCTGTCATATTATGTAATCTCGAGCTGGGACTAGATGCACAGAAAAAATCTATGCAAACTTTCACCAAACCTTCTAAGCGAAGGACAACTCCAAACTCCAAAGGTAGGGATTTCTTATTATACATACCATCGTGGACCAAGAACTACTAAGGAGGACATGTGAGAATATTCAATGTTGTTAATCCTGCCATGTGTAATCAACCCAGAGAAAAATCTTATCTTACTTTTCCAGATTTTAACCTTCCATAGTATATGCGATTATATGTATTTTTAAAATCAATTCTGAAGATGATGCCCTCCAATTTCCTAGCCCTATAATCCTCTATGCTCTCATTTGAAATCAAGATTTCATCGATGTTTTGTCTACCCAATAGAAAAGCACCTCGACTCTCTGATATAGTACCCAAAAATGTTCCTTAACCTATCCACTATGACTTTAGCTGTTGTCTTATAAAGGCTAGGGATAAGACTCATAGTTGAAATTCCTTTATACTCCTAGTATAGGACTTCTTGCGATAAGGAAGATATAGGTCTTGTTCATGGAAGACCCAATAATACCCCTCTCATGGAACTCATTAAACACCTGGGGATTGGGATTCACCTTTCATCATGTCTCAACTATTCTAGAAAAGAAGCCAACCTAAATGTAGCTCAATTAGTTAAGACATGTTCTCGACCTTTTGGTCGGAGATTCAAATCTCTACGCCCTCATGTTGTCAAACTCAAAAAAAAAAAAAAAAAAAAAAAATCTAGTAAAGAAGTTTTAGTCAACGTTGTTGAAGGCCTTTTCAAAATTGATGTAGAAAATGACATCTTCTCATTTACTGGCCCTGTAATGCTCTATAGCTTCATTGGGAATAATAACCTCATCAATATTCTAGCTCTTAGCCACGAAAAAGAGTCAGGGTTATTGAAAATTGTATAGGTCAACACCTTTTCAATCTATCTGTTAGGACCTTGCTATAATTTAGTTTTGTGCACGCTGGTGGCTGAATTAATAAATCTGAAACCTTCGACTCCATAGGCATTTTTATTCTTCGGAGACATATAAAAGTTCCATTTCTTATCCATATTCATAAGCCTGTTGGGCCTTGCTAGGAGAACTAAAAAGGCTTCTAGGAGTTTCCTTTGGCAAGGCATTATTACTGACCAAGATAATCATATGATGAAATGGAAGTTATTTGTTAGAAGAAACCTTTAGGTCTTGGTTTGGGTAATGTGAGAATATGACCAAATTGGTAGAACCTGAACACTAACAATATATTGAAATATAAAAGATAGAATAACTACAATATCACCCAAGTAATTTGAGGTACTTGGACTCTCTTGAGGATTCTTACTCCAGCCAAACCATACTACTAATTGCCTACCTCCAAACTTACCCACTTATTGTATTTATAACCAACCTCCACCCCAATTACTAATATACCTTGATACCCTAATAATATCCCTAATCTATCCCAATAGCAATCCTATGGATAGCACAATCCTATAAAAAATGTAACTGTTTAATTGCAAACAGTTGCACAATGTAACAGTTTGGCAATTGTCACATGGGATGCTAAATCCTTTTTTCAACCATTCTCCTTCCTGACTCCTATCGGCTCTTCAACGATTTGGTAACAATAGTTAATGCGAACAAAATATGTATGTTTTGGGGAAACTGGTGCGGTTTGGATGGGACATAGCTCTTTAGCACTTTAATTGGAAACAGGTCTTTAATTATCCTGTCCTTTTGCTAATGACTAGCTGAAAGCGTTTTTAAGTCATCCCTTGATTGAATTTGGATCCCAAATCTCCCCTTCCTCTTTGTAGTGTCTTGATGTAACATAACAGTGTAAGGAACAAATCTTATAGAGATGGGGTGGGGCCTATAGTTTAGGAACTAAAGTGTGAGGGGTTCAAATCCCTTCTCGCAATTTCGAGATAAGATTAAGTTTTTAGATTATATGATGTACTTGACGTTTGTAAATAAGGTGTTTTACCAGGGGGATTCAGTTCTTACATGTAAAGTCTCAATACCAATGCATAAAAAGTTGTTACATCTATAAACTATGTGCCAGTCTAACTTTCTTTGATTGACCTGTTGGAAGGAAAGGCGTTAGAAAGTTAATTCATCTGATAAATCTCTCCCCTATGTTTTCAGACTTCTTAGTTTCAGCTGCTGTTGCTGAATTTAAAGGTCCAGATATATTTGGCGTGGTTCGATTGGCTCAGGTAAACATGGAACTGGCTAGGGTTGAAGCCAACTTTAGTGGACTCTCACCTGGAAAACATGGTTGGTCAATCAATGAATTTGGTGATCTGACAAGAGGTGCTGCTAGCACAGGGAAAGTGTTTGATTCTGCAGATTCTGGCTCTAGTAATGAGGTTACCTTTCAACTTATGATTTTAATGACATTCCTTTTATTATTCTTCCATAAATTTCATTATGCTCTTTCTTGAGACCATGCTTCTGCTTTAGTTTTATGGTTAGTGTTTGGATGATTCATTGCAATGGTGATATGTCTGTTCATAAGTATTTTATGATTTAGGTTAAATTATCAATCTGGTTCCATGGGTTGGGTTTAGTTTCGATCTCTGTCAAAAGTTTCAATTTCGTCCTATAGTTTGTTGGACCTCACAAATTGTCCTTAAACCATTTTTACCCATTTACAGATCTACCGTTTTACCCTCCTATTTTTAATCTAACCCTAAATTGTAATGGAGTCAGCTAAGTAAAAAGATGTAGAGCTAAATGAATAGACAATGTGTTGCATATTTAGTTTGATTATGGCTTGTATCAAGGAGCAGAGCCATACATTTTCTTAGGGAGGACAAAATTTTACCTTTGAAATTTGGACCATTTAGGGGAGGCAGATTAGAAAGAAAATTACGGAAACATGTAGACCAAATTGGAACTTTTAGGAAGTAAAAGGATCAAAGTGAAACTAAGCCTAACCTATAGGACTAAATTGCTAATTTAACCTCTGTTTTTTTTTTTTAATGTATTTTATGTAATCTAGAATGATATTATGTGATGACGTATTTACAGCCATTGGGTGACCTGGGAACATTAGATGCCGATGAAAATGGCGAATCCCTTTTCTCTGGGGTCAAACAGAAGCTGCGAGTTTCTGATCTTATCGGGCGATCGATAGCCGTGTATGAGACTGAAGACAAGTCGGTTCCAGGCATTGCAGCAGCAGTAGTAGCTCGAAGTGCGGGTGTCGGTGAGAACTACAAGAAGTTATGCACCTGTGATGGGACGACCATTTGGGAATCAAGTAACAGAGATTTTGTCACCAGCAAAGTC

mRNA sequence

CCAGCTAGAAATTCCTTCGGATTTATCACAACCTTTGCCCATTCACCTTCTGCTGTTCCCATGGCGGCACCCACTTCGGAACCAACCTCTTTCTCTCAGGTTCCCTTTCATTTCTTAAACCCATCTCCAATTTCTACAGAGTATATGGTGGATATGAAATGTGAGGGCTGCGTTAATGCTGTCAAGGACAAGTTACAGGGTGTTGATGGTGTAAAGAATGTTGATGTGGACTTGAGCAATCAAGTGGTTAGGATACTGGGCACAACACCTGTGAAGACAATGACCGAAGCTTTGGAGCAGACAGGTCGAAAAGCCCGGTTAATTGGGCAAGGGGTCCCTGAGGACTTCTTAGTTTCAGCTGCTGTTGCTGAATTTAAAGGTCCAGATATATTTGGCGTGGTTCGATTGGCTCAGGTAAACATGGAACTGGCTAGGGTTGAAGCCAACTTTAGTGGACTCTCACCTGGAAAACATGGTTGGTCAATCAATGAATTTGGTGATCTGACAAGAGGTGCTGCTAGCACAGGGAAAGTGTTTGATTCTGCAGATTCTGGCTCTAGTAATGAGCCATTGGGTGACCTGGGAACATTAGATGCCGATGAAAATGGCGAATCCCTTTTCTCTGGGGTCAAACAGAAGCTGCGAGTTTCTGATCTTATCGGGCGATCGATAGCCGTGTATGAGACTGAAGACAAGTCGGTTCCAGGCATTGCAGCAGCAGTAGTAGCTCGAAGTGCGGGTGTCGGTGAGAACTACAAGAAGTTATGCACCTGTGATGGGACGACCATTTGGGAATCAAGTAACAGAGATTTTGTCACCAGCAAAGTC

Coding sequence (CDS)

CCAGCTAGAAATTCCTTCGGATTTATCACAACCTTTGCCCATTCACCTTCTGCTGTTCCCATGGCGGCACCCACTTCGGAACCAACCTCTTTCTCTCAGGTTCCCTTTCATTTCTTAAACCCATCTCCAATTTCTACAGAGTATATGGTGGATATGAAATGTGAGGGCTGCGTTAATGCTGTCAAGGACAAGTTACAGGGTGTTGATGGTGTAAAGAATGTTGATGTGGACTTGAGCAATCAAGTGGTTAGGATACTGGGCACAACACCTGTGAAGACAATGACCGAAGCTTTGGAGCAGACAGGTCGAAAAGCCCGGTTAATTGGGCAAGGGGTCCCTGAGGACTTCTTAGTTTCAGCTGCTGTTGCTGAATTTAAAGGTCCAGATATATTTGGCGTGGTTCGATTGGCTCAGGTAAACATGGAACTGGCTAGGGTTGAAGCCAACTTTAGTGGACTCTCACCTGGAAAACATGGTTGGTCAATCAATGAATTTGGTGATCTGACAAGAGGTGCTGCTAGCACAGGGAAAGTGTTTGATTCTGCAGATTCTGGCTCTAGTAATGAGCCATTGGGTGACCTGGGAACATTAGATGCCGATGAAAATGGCGAATCCCTTTTCTCTGGGGTCAAACAGAAGCTGCGAGTTTCTGATCTTATCGGGCGATCGATAGCCGTGTATGAGACTGAAGACAAGTCGGTTCCAGGCATTGCAGCAGCAGTAGTAGCTCGAAGTGCGGGTGTCGGTGAGAACTACAAGAAGTTATGCACCTGTGATGGGACGACCATTTGGGAATCAAGTAACAGAGATTTTGTCACCAGCAAAGTC

Protein sequence

PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAVKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAAVAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV

Homology

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BLAST of MS012884 vs. NCBI nr
Match: XP_022152804.1 (copper chaperone for superoxide dismutase, chloroplastic [Momordica charantia])

HSP 1 Score: 504.2 bits (1297), Expect = 7.1e-139
Identity = 261/276 (94.57%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNA 60
           PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQ   + +    + TEYMVDMKCEGCVNA
Sbjct: 50  PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQ---NNVGLPELLTEYMVDMKCEGCVNA 109

Query: 61  VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSA 120
           VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVP DFLVSA
Sbjct: 110 VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPGDFLVSA 169

Query: 121 AVAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD 180
           AVAEFKGP+IFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD
Sbjct: 170 AVAEFKGPEIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD 229

Query: 181 SADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA 240
           SADSGSSNEPLGDLGTLDADENGE+LFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA
Sbjct: 230 SADSGSSNEPLGDLGTLDADENGEALFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA 289

Query: 241 VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV
Sbjct: 290 VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 322

[Close]

BLAST of MS012884 vs. NCBI nr
Match: XP_023005469.1 (copper chaperone for superoxide dismutase, chloroplastic/cytosolic [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124
Identity = 237/275 (86.18%), Postives = 252/275 (91.64%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPSAVPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 54  SRNSSGFSRISAYSPSAVPMEKPTSEPISSYQ---STVDLPELLTEFMVDMKCEGCVNAV 113

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 114 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 173

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 174 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 233

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGTL+ADENGE+ FSGVKQKLRV DLIGRSIAVYETEDKSVPG+AAAV
Sbjct: 234 ADSGPSNEPLGDLGTLEADENGEAFFSGVKQKLRVCDLIGRSIAVYETEDKSVPGMAAAV 293

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+RDFVTSKV
Sbjct: 294 VARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 325

[Close]

BLAST of MS012884 vs. NCBI nr
Match: XP_022949309.1 (copper chaperone for superoxide dismutase, chloroplastic/cytosolic [Cucurbita moschata])

HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-123
Identity = 236/275 (85.82%), Postives = 250/275 (90.91%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPS VPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 53  SRNSSGFSRISAYSPSTVPMEKPTSEPISSYQ---STVDLPELLTEFMVDMKCEGCVNAV 112

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 113 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 172

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 173 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 232

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGTL+ADENGE+ FSGVKQ LRV DLIGRSIAVYETEDKSVPGIAAAV
Sbjct: 233 ADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAV 292

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+RDFVTSKV
Sbjct: 293 VARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 324

[Close]

BLAST of MS012884 vs. NCBI nr
Match: KAG6596818.1 (Copper chaperone for superoxide dismutase, chloroplastic/cytosolic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 236/275 (85.82%), Postives = 250/275 (90.91%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPSAVPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 52  SRNSSGFSRISAYSPSAVPMEKPTSEPISSHQ---STVDLPELLTEFMVDMKCEGCVNAV 111

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 112 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 171

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 172 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 231

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGTL+ADENGE+ FSGVKQ LRV DLIGRSIAVYETEDKSVPGIAAAV
Sbjct: 232 ADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAV 291

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+ DFVTSKV
Sbjct: 292 VARSAGVGENYKKLCTCDGTTIWESSDSDFVTSKV 323

[Close]

BLAST of MS012884 vs. NCBI nr
Match: AWW05329.1 (superoxide dismutase [Cu-Zn] 3 [Cucurbita pepo])

HSP 1 Score: 451.1 bits (1159), Expect = 7.1e-123
Identity = 234/275 (85.09%), Postives = 250/275 (90.91%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPSAVPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 52  SRNSSGFSRISAYSPSAVPMEKPTSEPISSYQ---STVDLPELLTEFMVDMKCEGCVNAV 111

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 112 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 171

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 172 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 231

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGT++A+ENGE+ FSGVKQ LRV DLIGRSIAVYETEDKSVPGIA AV
Sbjct: 232 ADSGPSNEPLGDLGTIEANENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAVAV 291

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+RDFVTSKV
Sbjct: 292 VARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 323

[Close]

BLAST of MS012884 vs. ExPASy Swiss-Prot
Match: Q9LD47 (Copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Arabidopsis thaliana OX=3702 GN=CCS PE=1 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.0e-95
Identity = 176/271 (64.94%), Postives = 218/271 (80.44%), Query Frame = 0


Query: 7   GFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAVKDKLQ 66
           G   +F  SP A  + +  +       +P        + TE+MVDM CEGCVNAVK+KL+
Sbjct: 57  GLSRSFVSSPMATALTSDRNLHQEDRAMP-------QLLTEFMVDMTCEGCVNAVKNKLE 116

Query: 67  GVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAAVAEFK 126
            ++G++ V+VDLSNQVVRILG++PVK MT+ALEQTGRKARLIGQGVP+DFLVSAAVAEFK
Sbjct: 117 TIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKARLIGQGVPQDFLVSAAVAEFK 176

Query: 127 GPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGS 186
           GPDIFGVVR AQV+MELAR+EANF+GLSPG H W INE+GDLT GAASTG +++     +
Sbjct: 177 GPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDLTNGAASTGSLYNPFQDQT 236

Query: 187 SNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETED-KSVPGIAAAVVARS 246
             EPLGDLGTL+AD+NGE+ +SG K+KL+V+DLIGR++ VY+T+D KS PG+ AAV+ARS
Sbjct: 237 GTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRAVVVYKTDDNKSGPGLTAAVIARS 296

Query: 247 AGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           AGVGENYKKLC+CDGT IWE++N DFV SKV
Sbjct: 297 AGVGENYKKLCSCDGTVIWEATNSDFVASKV 320

[Close]

BLAST of MS012884 vs. ExPASy Swiss-Prot
Match: Q7XTY9 (Copper chaperone for superoxide dismutase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CCS PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.7e-93
Identity = 178/255 (69.80%), Postives = 204/255 (80.00%), Query Frame = 0


Query: 13  AHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAVKDKLQGVDGVK 72
           A  P+AVP  A  +     S           + TE+MVDMKC+GCV AVK+K Q ++G+K
Sbjct: 59  ARKPNAVPPMAAAAATADLSAAADKGAALPELMTEFMVDMKCDGCVTAVKNKFQTLEGIK 118

Query: 73  NVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAAVAEFKGPDIFG 132
           N++VDL+NQVVR+LG+ PV TM + L QTGR ARLIGQG P DFLVSAAVAEFKGP IFG
Sbjct: 119 NIEVDLNNQVVRVLGSLPVNTMLDTLHQTGRDARLIGQGNPNDFLVSAAVAEFKGPVIFG 178

Query: 133 VVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGSSNEPLG 192
           VVRLAQVNMELA VEA FSGLSPGKHGWSINEFGDLTRGA STGKV++ +D   SN+PLG
Sbjct: 179 VVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKVYNPSDY-RSNKPLG 238

Query: 193 DLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENY 252
           DLGTL+A E GE+ FS  K+KL+V DLIGRSIA+Y TED+S PGIAAAV+ARSAGVGENY
Sbjct: 239 DLGTLEAGEKGEAQFSASKEKLKVVDLIGRSIALYATEDRSDPGIAAAVIARSAGVGENY 298

Query: 253 KKLCTCDGTTIWESS 268
           KKLCTCDG TIWESS
Sbjct: 299 KKLCTCDGVTIWESS 312

[Close]

BLAST of MS012884 vs. ExPASy Swiss-Prot
Match: Q9WU84 (Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.6e-38
Identity = 98/243 (40.33%), Postives = 137/243 (56.38%), Query Frame = 0


Query: 47  EYMVDMKCEGCVNAVKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKAR 106
           E+ V M C+ CV+AV   L+GV GV+NVDV L NQ+V +  T P + +   LE TGR+A 
Sbjct: 15  EFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAV 74

Query: 107 LIGQGVPEDFLVSAAVAEFKG-PDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEF 166
           L G G  +   + AAVA  +G   I GVVR  Q++ EL  +E    GL PG HG  ++++
Sbjct: 75  LKGMGSSQLQNLGAAVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQY 134

Query: 167 GDLTRGAASTGKVF--DSADSG---SSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLI 226
           GDLTR   S G  F  D A  G    ++   GDLG + A+  G + F    ++L+V D+I
Sbjct: 135 GDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKVWDVI 194

Query: 227 GRSIAVYETED--------------KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWES 270
           GRS+ + E ED               S   +A  ++ARSAG+ +N K++C+CDG TIWE 
Sbjct: 195 GRSLVIDEGEDDLGRGGHPLSKITGNSGKRLACGIIARSAGLFQNPKQICSCDGLTIWEE 254

[Close]

BLAST of MS012884 vs. ExPASy Swiss-Prot
Match: Q9JK72 (Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.8e-37
Identity = 95/243 (39.09%), Postives = 138/243 (56.79%), Query Frame = 0


Query: 47  EYMVDMKCEGCVNAVKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKAR 106
           E+ V M C+ CV+AV   L+G  GV+NV+V L NQ+V +  T P + +   LE TGR+A 
Sbjct: 15  EFTVQMSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQAV 74

Query: 107 LIGQGVPEDFLVSAAVAEFKGP-DIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEF 166
           L G G  +   + AAVA  +G   + GVVR  Q++ EL  +E    GL PG HG  ++++
Sbjct: 75  LKGMGSSQLKNLGAAVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQY 134

Query: 167 GDLTRGAASTGKVF--DSADSG---SSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLI 226
           GDLT+  +S G  F  D A  G    ++   GDLG + A+ +G + F    ++L+V D+I
Sbjct: 135 GDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKVWDVI 194

Query: 227 GRSIAVYETED--------------KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWES 270
           GRS+ V E ED               S   +A  ++ARSAG+ +N K++C+CDG TIWE 
Sbjct: 195 GRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLACGIIARSAGLFQNPKQICSCDGLTIWEE 254

[Close]

BLAST of MS012884 vs. ExPASy Swiss-Prot
Match: O14618 (Copper chaperone for superoxide dismutase OS=Homo sapiens OX=9606 GN=CCS PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-37
Identity = 96/243 (39.51%), Postives = 137/243 (56.38%), Query Frame = 0


Query: 47  EYMVDMKCEGCVNAVKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKAR 106
           E+ V M C+ CV+AV+  LQGV GV++V+V L +Q+V +  T P + +   LE TGR+A 
Sbjct: 15  EFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAV 74

Query: 107 LIGQGVPEDFLVSAAVAEFKGP-DIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEF 166
           L G G  +   + AAVA   GP  + GVVR  Q+  E   +E    GL PG HG  ++++
Sbjct: 75  LKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQY 134

Query: 167 GDLTRGAASTGKVF--DSADSG---SSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLI 226
           GDLT    S G  F  D A  G    S+   GDLG + AD +G ++F    ++L+V D+I
Sbjct: 135 GDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVI 194

Query: 227 GRSIAVYETED--------------KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWES 270
           GRS+ + E ED               S   +A  ++ARSAG+ +N K++C+CDG TIWE 
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEE 254

[Close]

BLAST of MS012884 vs. ExPASy TrEMBL
Match: A0A6J1DH32 (copper chaperone for superoxide dismutase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020432 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.4e-139
Identity = 261/276 (94.57%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 1   PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNA 60
           PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQ   + +    + TEYMVDMKCEGCVNA
Sbjct: 50  PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQ---NNVGLPELLTEYMVDMKCEGCVNA 109

Query: 61  VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSA 120
           VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVP DFLVSA
Sbjct: 110 VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPGDFLVSA 169

Query: 121 AVAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD 180
           AVAEFKGP+IFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD
Sbjct: 170 AVAEFKGPEIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD 229

Query: 181 SADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA 240
           SADSGSSNEPLGDLGTLDADENGE+LFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA
Sbjct: 230 SADSGSSNEPLGDLGTLDADENGEALFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA 289

Query: 241 VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV
Sbjct: 290 VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 322

[Close]

BLAST of MS012884 vs. ExPASy TrEMBL
Match: A0A6J1KZ99 (copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita maxima OX=3661 GN=LOC111498447 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.1e-124
Identity = 237/275 (86.18%), Postives = 252/275 (91.64%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPSAVPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 54  SRNSSGFSRISAYSPSAVPMEKPTSEPISSYQ---STVDLPELLTEFMVDMKCEGCVNAV 113

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 114 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 173

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 174 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 233

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGTL+ADENGE+ FSGVKQKLRV DLIGRSIAVYETEDKSVPG+AAAV
Sbjct: 234 ADSGPSNEPLGDLGTLEADENGEAFFSGVKQKLRVCDLIGRSIAVYETEDKSVPGMAAAV 293

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+RDFVTSKV
Sbjct: 294 VARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 325

[Close]

BLAST of MS012884 vs. ExPASy TrEMBL
Match: A0A6J1GCG2 (copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita moschata OX=3662 GN=LOC111452696 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.3e-124
Identity = 236/275 (85.82%), Postives = 250/275 (90.91%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPS VPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 53  SRNSSGFSRISAYSPSTVPMEKPTSEPISSYQ---STVDLPELLTEFMVDMKCEGCVNAV 112

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 113 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 172

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 173 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 232

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGTL+ADENGE+ FSGVKQ LRV DLIGRSIAVYETEDKSVPGIAAAV
Sbjct: 233 ADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAV 292

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+RDFVTSKV
Sbjct: 293 VARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 324

[Close]

BLAST of MS012884 vs. ExPASy TrEMBL
Match: A0A2Z4GTA1 (Superoxide dismutase [Cu-Zn] 3 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.4e-123
Identity = 234/275 (85.09%), Postives = 250/275 (90.91%), Query Frame = 0


Query: 2   ARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAV 61
           +RNS GF    A+SPSAVPM  PTSEP S  Q     ++   + TE+MVDMKCEGCVNAV
Sbjct: 52  SRNSSGFSRISAYSPSAVPMEKPTSEPISSYQ---STVDLPELLTEFMVDMKCEGCVNAV 111

Query: 62  KDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAA 121
           K+KLQGVDGVK+VDVDLSNQVVRILGTTPVKTMTEALEQTGRK RLIGQGVPEDFLVSAA
Sbjct: 112 KNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAA 171

Query: 122 VAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 181
           V+EFKGP+IFGVVRLAQV+MELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS
Sbjct: 172 VSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDS 231

Query: 182 ADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAAV 241
           ADSG SNEPLGDLGT++A+ENGE+ FSGVKQ LRV DLIGRSIAVYETEDKSVPGIA AV
Sbjct: 232 ADSGPSNEPLGDLGTIEANENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAVAV 291

Query: 242 VARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VARSAGVGENYKKLCTCDGTTIWESS+RDFVTSKV
Sbjct: 292 VARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 323

[Close]

BLAST of MS012884 vs. ExPASy TrEMBL
Match: A0A0S2LKY4 (Superoxide dismutase 1 OS=Cucumis melo OX=3656 GN=LOC103490957 PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.8e-122
Identity = 231/276 (83.70%), Postives = 248/276 (89.86%), Query Frame = 0


Query: 1   PARNSFGFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNA 60
           P  NSFGF+  FA  PSAV M  PTSE  S SQ   + ++   + TEYMVDMKCEGCVNA
Sbjct: 56  PTSNSFGFVRNFAPPPSAVRMETPTSESISSSQ---NNVDLPELLTEYMVDMKCEGCVNA 115

Query: 61  VKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSA 120
           VK+KLQGVDGVK+VDVDLSNQVVRILG TPVK MTEALEQTGRKARLIGQGVPEDFL+SA
Sbjct: 116 VKNKLQGVDGVKSVDVDLSNQVVRILGATPVKIMTEALEQTGRKARLIGQGVPEDFLISA 175

Query: 121 AVAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFD 180
           AVAEFKGP+IFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLT+GAASTGK+F 
Sbjct: 176 AVAEFKGPNIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTKGAASTGKIFG 235

Query: 181 SADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETEDKSVPGIAAA 240
           SADS  SNEPLGDLGTLD +E GE+ FSG+KQKLRVSDLIGRSIAVYETEDKSVPGIAAA
Sbjct: 236 SADSDPSNEPLGDLGTLDVNEKGEAFFSGIKQKLRVSDLIGRSIAVYETEDKSVPGIAAA 295

Query: 241 VVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           VVARSAGVGENYK+LCTCDGTTIWE+S+RDFVTSKV
Sbjct: 296 VVARSAGVGENYKQLCTCDGTTIWEASDRDFVTSKV 328

[Close]

BLAST of MS012884 vs. TAIR 10
Match: AT1G12520.1 (copper chaperone for SOD1 )

HSP 1 Score: 351.3 bits (900), Expect = 7.1e-97
Identity = 176/271 (64.94%), Postives = 218/271 (80.44%), Query Frame = 0


Query: 7   GFITTFAHSPSAVPMAAPTSEPTSFSQVPFHFLNPSPISTEYMVDMKCEGCVNAVKDKLQ 66
           G   +F  SP A  + +  +       +P        + TE+MVDM CEGCVNAVK+KL+
Sbjct: 57  GLSRSFVSSPMATALTSDRNLHQEDRAMP-------QLLTEFMVDMTCEGCVNAVKNKLE 116

Query: 67  GVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLIGQGVPEDFLVSAAVAEFK 126
            ++G++ V+VDLSNQVVRILG++PVK MT+ALEQTGRKARLIGQGVP+DFLVSAAVAEFK
Sbjct: 117 TIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKARLIGQGVPQDFLVSAAVAEFK 176

Query: 127 GPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGS 186
           GPDIFGVVR AQV+MELAR+EANF+GLSPG H W INE+GDLT GAASTG +++     +
Sbjct: 177 GPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDLTNGAASTGSLYNPFQDQT 236

Query: 187 SNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYETED-KSVPGIAAAVVARS 246
             EPLGDLGTL+AD+NGE+ +SG K+KL+V+DLIGR++ VY+T+D KS PG+ AAV+ARS
Sbjct: 237 GTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRAVVVYKTDDNKSGPGLTAAVIARS 296

Query: 247 AGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           AGVGENYKKLC+CDGT IWE++N DFV SKV
Sbjct: 297 AGVGENYKKLCSCDGTVIWEATNSDFVASKV 320

[Close]

BLAST of MS012884 vs. TAIR 10
Match: AT1G12520.2 (copper chaperone for SOD1 )

HSP 1 Score: 348.2 bits (892), Expect = 6.0e-96
Identity = 168/229 (73.36%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 49  MVDMKCEGCVNAVKDKLQGVDGVKNVDVDLSNQVVRILGTTPVKTMTEALEQTGRKARLI 108
           MVDM CEGCVNAVK+KL+ ++G++ V+VDLSNQVVRILG++PVK MT+ALEQTGRKARLI
Sbjct: 1   MVDMTCEGCVNAVKNKLETIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKARLI 60

Query: 109 GQGVPEDFLVSAAVAEFKGPDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDL 168
           GQGVP+DFLVSAAVAEFKGPDIFGVVR AQV+MELAR+EANF+GLSPG H W INE+GDL
Sbjct: 61  GQGVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDL 120

Query: 169 TRGAASTGKVFDSADSGSSNEPLGDLGTLDADENGESLFSGVKQKLRVSDLIGRSIAVYE 228
           T GAASTG +++     +  EPLGDLGTL+AD+NGE+ +SG K+KL+V+DLIGR++ VY+
Sbjct: 121 TNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRAVVVYK 180

Query: 229 TED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSNRDFVTSKV 277
           T+D KS PG+ AAV+ARSAGVGENYKKLC+CDGT IWE++N DFV SKV
Sbjct: 181 TDDNKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWEATNSDFVASKV 229

[Close]

BLAST of MS012884 vs. TAIR 10
Match: AT1G12520.3 (copper chaperone for SOD1 )

HSP 1 Score: 281.6 bits (719), Expect = 6.9e-76
Identity = 136/184 (73.91%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 94  MTEALEQTGRKARLIGQGVPEDFLVSAAVAEFKGPDIFGVVRLAQVNMELARVEANFSGL 153
           MT+ALEQTGRKARLIGQGVP+DFLVSAAVAEFKGPDIFGVVR AQV+MELAR+EANF+GL
Sbjct: 1   MTQALEQTGRKARLIGQGVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGL 60

Query: 154 SPGKHGWSINEFGDLTRGAASTGKVFDSADSGSSNEPLGDLGTLDADENGESLFSGVKQK 213
           SPG H W INE+GDLT GAASTG +++     +  EPLGDLGTL+AD+NGE+ +SG K+K
Sbjct: 61  SPGTHSWCINEYGDLTNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEK 120

Query: 214 LRVSDLIGRSIAVYETED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSNRDFV 273
           L+V+DLIGR++ VY+T+D KS PG+ AAV+ARSAGVGENYKKLC+CDGT IWE++N DFV
Sbjct: 121 LKVADLIGRAVVVYKTDDNKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWEATNSDFV 180

Query: 274 TSKV 277
            SKV
Sbjct: 181 ASKV 184

[Close]

BLAST of MS012884 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 121 AVAEFKG-PDIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVF 180
           AVA  KG  D+ GVV L Q +     V    +GL+PG HG+ ++EFGD T G  STG  F
Sbjct: 67  AVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHF 126

Query: 181 --DSADSGSSNEP---LGDLGTLDADENGESLFSGVKQKLRV---SDLIGRSIAVYETED 232
             ++   G+  +     GDLG ++A+ +G +  + V  ++ +   + ++GR+  V+E +D
Sbjct: 127 NPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKD 186

[Close]

BLAST of MS012884 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-06
Identity = 40/120 (33.33%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 121 AVAEFKGP-DIFGVVRLAQVNMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVF 180
           AVA   G  ++ G ++  Q       V    SGLSPG HG+ I+ FGD T G  STG  F
Sbjct: 10  AVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPHF 69

Query: 181 DSAD--SGSSNEP---LGDLGTLDADENGESLFSGVKQKLRVS---DLIGRSIAVYETED 232
           +  +   G  NE     GDLG + A  NG +      + + +S    ++GR++ V+   D
Sbjct: 70  NPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADPD 129

The following BLAST results are available for this feature:

BLAST of MS012884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152804.1	7.1e-139	94.57	copper chaperone for superoxide dismutase, chloroplastic [Momordica charantia]	[more]
XP_023005469.1	2.2e-124	86.18	copper chaperone for superoxide dismutase, chloroplastic/cytosolic [Cucurbita ma...	[more]
XP_022949309.1	1.1e-123	85.82	copper chaperone for superoxide dismutase, chloroplastic/cytosolic [Cucurbita mo...	[more]
KAG6596818.1	1.4e-123	85.82	Copper chaperone for superoxide dismutase, chloroplastic/cytosolic, partial [Cuc...	[more]
AWW05329.1	7.1e-123	85.09	superoxide dismutase [Cu-Zn] 3 [Cucurbita pepo]	[more]

BLAST of MS012884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD47	1.0e-95	64.94	Copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Arabidopsi...	[more]
Q7XTY9	2.7e-93	69.80	Copper chaperone for superoxide dismutase, chloroplastic OS=Oryza sativa subsp. ...	[more]
Q9WU84	5.6e-38	40.33	Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 S...	[more]
Q9JK72	2.8e-37	39.09	Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs P...	[more]
O14618	3.6e-37	39.51	Copper chaperone for superoxide dismutase OS=Homo sapiens OX=9606 GN=CCS PE=1 SV...	[more]

BLAST of MS012884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH32	3.4e-139	94.57	copper chaperone for superoxide dismutase, chloroplastic OS=Momordica charantia ...	[more]
A0A6J1KZ99	1.1e-124	86.18	copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita ...	[more]
A0A6J1GCG2	5.3e-124	85.82	copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita ...	[more]
A0A2Z4GTA1	3.4e-123	85.09	Superoxide dismutase [Cu-Zn] 3 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A0S2LKY4	3.8e-122	83.70	Superoxide dismutase 1 OS=Cucumis melo OX=3656 GN=LOC103490957 PE=2 SV=1	[more]

BLAST of MS012884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12520.1	7.1e-97	64.94	copper chaperone for SOD1	[more]
AT1G12520.2	6.0e-96	73.36	copper chaperone for SOD1	[more]
AT1G12520.3	6.9e-76	73.91	copper chaperone for SOD1	[more]
AT2G28190.1	2.5e-09	34.17	copper/zinc superoxide dismutase 2	[more]
AT5G18100.1	3.4e-06	33.33	copper/zinc superoxide dismutase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 48..104 e-value: 1.4E-11 score: 44.6
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 52..107 score: 13.102555
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 47..106 e-value: 1.35203E-14 score: 64.9345
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	2.60.40.200	Superoxide dismutase, copper/zinc binding domain	coord: 114..244 e-value: 2.7E-26 score: 94.0
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 109..268
None	No IPR available	GENE3D	3.30.70.100		coord: 40..113 e-value: 2.2E-16 score: 61.8
None	No IPR available	PANTHER	PTHR10003:SF86	COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC	coord: 40..276
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 128..232 e-value: 2.9E-17 score: 63.1
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 40..276
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 46..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012884.1	MS012884.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006801	superoxide metabolic process
molecular_function	GO:0046872	metal ion binding