MS012548 (gene) Bitter gourd (TR) v1

Overview


Name	MS012548
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ras-related protein Rab-1A
Location	scaffold63: 1478547 .. 1481286 (-)
RNA-Seq Expression	MS012548
Synteny	MS012548

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCCTTCTGCAGTGATTATTTGTTCAAGCTTTTGTTAATCGGCGACTCGTCGGTGGGAAAATCGTGTCTGCTTCTCAGATTTGCAGTGAGTTGATTGTTGGCCTTTTGATATCTGACGTTTCTTCTTTAATTTCATCTGTTTATGTGTCAGACTGTGGAAATGAGTGACGATTTAGGGCTTTATGTCGTGTTTTTTTTCCTCTTCTGTCTTTATGAGTACGGCAAAAGGTTAATTGCTTTGTTTTTGTTTTCCCTGATTTTTCAGGATGATTCTTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTCGTAAGTCTTGAAACCGTTTCCGTTTAATTGATTATATATGGAGCTTTTATGAGCCATTGCTTGTGAATTTTGCTTCTTTACGACTAATCTTCTGTAATTTTCAGAAAATCAGAACTGTGGAACTGGATGGAAAGACCATTAAGCTCCAGATTGTGAGTAGGCTTGAATAGTTTCTTATTTGATAATTTTCCTTTCTTATTCGTAGATTGTGTTTTTCTTTGCTGTGTAATTAAACATGCAGCGATAGCTTCGTTAGAGGAAGCTGCTTTCTGTCCTGGTTTCAGATACTTTCTAAAATATTGCTTTGCATCTATTCAGTTCAGTTGTATGTTCCATATTTCTTTAGGAAAAAAGAGCATACAGAAAACTTCTCAGTTGCATGTTTAATGTGATCCGATTGCTATTACTTTATTGTGCTCGGACTAAAATTAAGGCCATATTGGATTAGAAAAGCTATCGAATGGTATTGATATCCCTTGAATTTTCTTTTTCAATTTCTCTAGGTTTTAATATGATAATATGAAATTCAAATTTCAAAGTAGCATATTTAAGTTTCAGACACCATCAATCGTGTAGGTACGTAGGCTGTTAAATCACATGCTTTGACTGAAATAGGTTGTGATGTTGCTACTTTATTAGTTTCTATCTTAATTCATACATTTGTGCCAGATTCCGTCTTCTATGCAAGTCTACCTGACACAAAAGTGGTGTAATTATTAACAGATGAACAGGAAACAGTGGATAATGTTGCGATGCAAATTGTTAGAGACATGATAGTGAACATGCACTTTCACTTACCATTATTGTTGACTGGCCAATCCACTTTTTTCTGCCTTACTTTTTTTACAAAAGCTGAATTCTTAATCATTTCAAGGACTGAACGAAAGCCAATTGGATATACAGAAGACTTGACTGGTTCTATTGTTTTATTCATTTAGTGGGATACTGCTGGTCAGGAAAGATTCAGGACTATAACAAGCAGCTATTACAGAGGTGCACATGGAATAATTGTAAGAATCTTGCCTACTGAATTCAGGGACCAAAAGATTTGTATGGAATTTTTACAAGATCTCTCTCTCACTTGTTCTCAGTCTGTAATTTTCTAATTTTTGATTGGAAGATTCTGTTCAAAATTTCAAATGTCATGTTGTCATTAGCCTTATTAGCCCTTAAGCCAATATCTAAGAAAAGTTGGGAGGATGCGTTCTGATCTCTTCTTAATGTAGCTTGCCTAGAAAGCAAACTCGCGATTGTATTGTTTGTTTTTGTCAGGTTTATTATTTGAAATTTTTATTAAAGAAATGTCTCATCATTACAATTTTTTTTTTAATTGCGACAGATTGTTTATGATGTCACTGAGATGGAGAGCTTTAACAATGTCAAGCAATGGCTGAACGAGATTGATAGATATGCTAATGACAGCGTATGCAAGCTTTTAGTAGGGAATAAGTGTGATTTAGTTGAGAACAAGGTTGTTGACACACAGACAGCAAAGGTATGGTTTTTATTTTAGCTGTGTTGTAGTTTTTAATCTTTAACTCTTTTTCTTTCTTTTTTCCTTTGAGATTTCAACTGAGAGTTGCTTCCACTTTTTGGTTATCAGTACGAGCAGTCTGACAATATGTCTGTGTTTTCGTACCACAATTGATTTTTCCCTGTATTACAACTCACAAGTGATACATATCATCCATATGATTAGTCATGGACATGAATTTAAAAGGACTTCAAAATTCAGTTAAGTCTTTTCAGCCATATTTGATTGCATGATCCCTTTGATTATGATGATTTTTAAAATGAATGTATTATGTGACTACTCCGTCTAGTATCATTAGTTTTAGGTCCTTGCCACTATCTCTCTCATGCATTTGCAGAAACATAAGCATGATATGCAATCCCCCCCTTCTCCACCTCCTTGCTTCTCCTTGGCCTTCCCCTAATAATATAAAGAAGATAAGCCAACATAATACTTGATAAAATTTGTCGTAATTTCCTCTTGTGGATGGACTTTTAGGCACTTGCAGATGAGCTTGGAATCCCTTTTCTAGAGACCAGTGCGAAAGACTCGATCAATGTGGAGCAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAGTAAAGACCATTCTACCTGTTACTTCTCGTATTATAATATTGTGGCATGGTGTATTCTGCTCGGGTATCTGGCTTTAGCTCCTTCGACATCATTGAAAAATTCAATATGATAGTTGATTCAAATTCAAAGTGCTGTCTGGATTAAAGTGGACTTTTTCATTAGCATAATGTTGAATTTCTCTCTTCTTATGTTTAATTTCTGACGTTTCAAAATCTATATAGAATGGGGAGCCAGCCAAGTTCCACCAAGTCGTCAGGGACCGTGCAAATGAAGGGGCAGCCAATTGAGCAAAAGAGCAGCTGTTGCAGT

mRNA sequence

TTCTCCTTCTGCAGTGATTATTTGTTCAAGCTTTTGTTAATCGGCGACTCGTCGGTGGGAAAATCGTGTCTGCTTCTCAGATTTGCAGATGATTCTTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTCAAAATCAGAACTGTGGAACTGGATGGAAAGACCATTAAGCTCCAGATTTGGGATACTGCTGGTCAGGAAAGATTCAGGACTATAACAAGCAGCTATTACAGAGGTGCACATGGAATAATTATTGTTTATGATGTCACTGAGATGGAGAGCTTTAACAATGTCAAGCAATGGCTGAACGAGATTGATAGATATGCTAATGACAGCGTATGCAAGCTTTTAGTAGGGAATAAGTGTGATTTAGTTGAGAACAAGGTTGTTGACACACAGACAGCAAAGGCACTTGCAGATGAGCTTGGAATCCCTTTTCTAGAGACCAGTGCGAAAGACTCGATCAATGTGGAGCAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAAATGGGGAGCCAGCCAAGTTCCACCAAGTCGTCAGGGACCGTGCAAATGAAGGGGCAGCCAATTGAGCAAAAGAGCAGCTGTTGCAGT

Coding sequence (CDS)

TTCTCCTTCTGCAGTGATTATTTGTTCAAGCTTTTGTTAATCGGCGACTCGTCGGTGGGAAAATCGTGTCTGCTTCTCAGATTTGCAGATGATTCTTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTCAAAATCAGAACTGTGGAACTGGATGGAAAGACCATTAAGCTCCAGATTTGGGATACTGCTGGTCAGGAAAGATTCAGGACTATAACAAGCAGCTATTACAGAGGTGCACATGGAATAATTATTGTTTATGATGTCACTGAGATGGAGAGCTTTAACAATGTCAAGCAATGGCTGAACGAGATTGATAGATATGCTAATGACAGCGTATGCAAGCTTTTAGTAGGGAATAAGTGTGATTTAGTTGAGAACAAGGTTGTTGACACACAGACAGCAAAGGCACTTGCAGATGAGCTTGGAATCCCTTTTCTAGAGACCAGTGCGAAAGACTCGATCAATGTGGAGCAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAAATGGGGAGCCAGCCAAGTTCCACCAAGTCGTCAGGGACCGTGCAAATGAAGGGGCAGCCAATTGAGCAAAAGAGCAGCTGTTGCAGT

Protein sequence

FSFCSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGTVQMKGQPIEQKSSCCS

Homology

[Close]

BLAST of MS012548 vs. NCBI nr
Match: XP_022136911.1 (ras-related protein RABD1 [Momordica charantia])

HSP 1 Score: 385.6 bits (989), Expect = 2.7e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT
Sbjct: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPIEQKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of MS012548 vs. NCBI nr
Match: XP_022929522.1 (ras-related protein RABD1-like [Cucurbita moschata] >XP_022985018.1 ras-related protein RABD1-like [Cucurbita maxima] >XP_023551876.1 ras-related protein RABD1-like [Cucurbita pepo subsp. pepo] >KAG6577361.1 Ras-related protein RABD1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015448.1 Ras-related protein RABD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDT+TAKA ADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSS+ SSG 
Sbjct: 126 VENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSSMSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPIEQKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of MS012548 vs. NCBI nr
Match: XP_008452238.1 (PREDICTED: ras-related protein RABD1 isoform X1 [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 189/196 (96.43%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKA A+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+S+KSSG 
Sbjct: 126 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of MS012548 vs. NCBI nr
Match: XP_004133726.1 (ras-related protein RABD1 [Cucumis sativus] >KGN56267.1 hypothetical protein Csa_009820 [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKA ADELGIPFLETSAKDS NVEQAFLTMAAEIKKKMGSQP+S+KSSG 
Sbjct: 126 VENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of MS012548 vs. NCBI nr
Match: XP_022762717.1 (ras-related protein RABD1 [Durio zibethinus])

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99
Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKA ADELGIPFLETSAKDSINVEQAFLTMA EIKKKMG+QP++ KSSGT
Sbjct: 126 VENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAANKSSGT 185

Query: 186 VQMKGQPIEQKSSCC 201
           VQMKGQPIEQK++CC
Sbjct: 186 VQMKGQPIEQKNNCC 200

[Close]

BLAST of MS012548 vs. ExPASy Swiss-Prot
Match: Q9ZRE2 (Ras-related protein RABD1 OS=Arabidopsis thaliana OX=3702 GN=RABD1 PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-90
Identity = 168/197 (85.28%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYD TEMESFNNVKQWL+EIDRYAN+SVCKLL+GNK D+
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSS-- 185
           VE+KVV T+T +ALADELGIPFLETSAKDSINVEQAFLT+A EIKKKMGSQ ++ K+S  
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185

Query: 186 GTVQMKGQPIEQKSSCC 201
           GTVQMKGQPI+Q +  C
Sbjct: 186 GTVQMKGQPIQQNNGGC 202

[Close]

BLAST of MS012548 vs. ExPASy Swiss-Prot
Match: P40392 (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-86
Identity = 159/197 (80.71%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDS VGKSCLLLRFADDSY++SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWLNEIDRYA+++V KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSS-G 185
            EN+VV  +  KALADE+GIPFLETSAKD+ NVE+AF+TMA EIK +M SQP++  S   
Sbjct: 126 AENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPA 185

Query: 186 TVQMKGQPIEQKSSCCS 202
           TVQM+GQP+ Q+SSCCS
Sbjct: 186 TVQMRGQPVAQQSSCCS 202

[Close]

BLAST of MS012548 vs. ExPASy Swiss-Prot
Match: Q9SEH3 (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.4e-85
Identity = 155/196 (79.08%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGII+ YDVT++ESFNNVKQWLNEIDRYA+++V KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
              KVV T+TAKA ADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP+      T
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQ++GQP+ Q+S CCS
Sbjct: 186 VQIRGQPVNQQSGCCS 201

[Close]

BLAST of MS012548 vs. ExPASy Swiss-Prot
Match: Q05737 (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.4e-85
Identity = 158/197 (80.20%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVT+ ESFNNVKQWLNEIDRYA+D+V KLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKS-SG 185
             NKVV T+TAKA ADE+GIPF+ETSAK++ NV+QAF+ MAA IK +M SQP++  +   
Sbjct: 126 TANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPA 185

Query: 186 TVQMKGQPIEQKSSCCS 202
           TVQ++GQP+ QK+SCCS
Sbjct: 186 TVQIRGQPVNQKTSCCS 202

[Close]

BLAST of MS012548 vs. ExPASy Swiss-Prot
Match: P16976 (GTP-binding protein YPTM1 OS=Zea mays OX=4577 GN=YPTM1 PE=2 SV=2)

HSP 1 Score: 312.0 bits (798), Expect = 4.9e-84
Identity = 162/202 (80.20%), Postives = 178/202 (88.12%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSC LLRFADDSYVDSYISTIGVDFKIRTVE++GKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYD+T+MESFNNVKQWL+EIDRYANDSV KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKK-KMGSQPS-STKSS 185
            EN+ VDT  A+A A E+GIPFLETSAK+SINVE+AFL M+A IKK K GSQ +   K S
Sbjct: 126 AENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPS 185

Query: 186 GTVQMKGQPIEQK----SSCCS 202
             VQMKG+PI+Q+    S CCS
Sbjct: 186 NVVQMKGRPIQQEQQKSSRCCS 207

[Close]

BLAST of MS012548 vs. ExPASy TrEMBL
Match: A0A6J1C4U5 (ras-related protein RABD1 OS=Momordica charantia OX=3673 GN=LOC111008488 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT
Sbjct: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPIEQKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of MS012548 vs. ExPASy TrEMBL
Match: A0A6J1JCC5 (ras-related protein RABD1-like OS=Cucurbita maxima OX=3661 GN=LOC111483110 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.0e-101
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDT+TAKA ADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSS+ SSG 
Sbjct: 126 VENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSSMSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPIEQKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of MS012548 vs. ExPASy TrEMBL
Match: A0A6J1EMZ9 (ras-related protein RABD1-like OS=Cucurbita moschata OX=3662 GN=LOC111436063 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.0e-101
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDT+TAKA ADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSS+ SSG 
Sbjct: 126 VENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSSMSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPIEQKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of MS012548 vs. ExPASy TrEMBL
Match: A0A0A0L6Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110640 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.8e-101
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKA ADELGIPFLETSAKDS NVEQAFLTMAAEIKKKMGSQP+S+KSSG 
Sbjct: 126 VENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of MS012548 vs. ExPASy TrEMBL
Match: A0A1S3BTF1 (ras-related protein RABD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493312 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.8e-101
Identity = 189/196 (96.43%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
           VENKVVDTQTAKA A+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+S+KSSG 
Sbjct: 126 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of MS012548 vs. TAIR 10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 334.0 bits (855), Expect = 8.6e-92
Identity = 168/197 (85.28%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYD TEMESFNNVKQWL+EIDRYAN+SVCKLL+GNK D+
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSS-- 185
           VE+KVV T+T +ALADELGIPFLETSAKDSINVEQAFLT+A EIKKKMGSQ ++ K+S  
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185

Query: 186 GTVQMKGQPIEQKSSCC 201
           GTVQMKGQPI+Q +  C
Sbjct: 186 GTVQMKGQPIQQNNGGC 202

[Close]

BLAST of MS012548 vs. TAIR 10
Match: AT4G17530.1 (RAB GTPase homolog 1C )

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-86
Identity = 155/196 (79.08%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGII+ YDVT++ESFNNVKQWLNEIDRYA+++V KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
              KVV T+TAKA ADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP+      T
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQ++GQP+ Q+S CCS
Sbjct: 186 VQIRGQPVNQQSGCCS 201

[Close]

BLAST of MS012548 vs. TAIR 10
Match: AT5G47200.1 (RAB GTPase homolog 1A )

HSP 1 Score: 310.8 bits (795), Expect = 7.8e-85
Identity = 154/196 (78.57%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGII+ YDVT++ESFNNVKQWLNEIDRYA+++V KLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185
              KVV T+TAKA ADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP+      T
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT 185

Query: 186 VQMKGQPIEQKSSCCS 202
           VQ++GQP+ Q+S CCS
Sbjct: 186 VQIRGQPVNQQSGCCS 201

[Close]

BLAST of MS012548 vs. TAIR 10
Match: AT1G02130.1 (RAS 5 )

HSP 1 Score: 308.1 bits (788), Expect = 5.0e-84
Identity = 153/197 (77.66%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYLFKLLLIGDS VGKSCLLLRF+DDSYV+SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTITSSYYRGAHGIIIVYDVT+ ESFNNVKQWL+EIDRYA+D+V KLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125

Query: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKS-SG 185
            EN+ +  +TAKA ADE+GIPF+ETSAKD+ NVEQAF+ M+A IK++M SQP+   +   
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185

Query: 186 TVQMKGQPIEQKSSCCS 202
           TVQ++GQP+ QK+ CCS
Sbjct: 186 TVQIRGQPVAQKNGCCS 202

[Close]

BLAST of MS012548 vs. TAIR 10
Match: AT3G09900.1 (RAB GTPase homolog E1E )

HSP 1 Score: 234.6 bits (597), Expect = 7.1e-62
Identity = 120/204 (58.82%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
           DYL KLLLIGDS VGKSCLLLRF+DD++  S+I+TIG+DFKIRTVELDGK IKLQIWDTA
Sbjct: 13  DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTA 72

Query: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125
           GQERFRTIT++YYRGA GI++VYDVT+  SFNN++ W+  I+++A+DSV K+LVGNK D+
Sbjct: 73  GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADM 132

Query: 126 VENK-VVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSG 185
            E+K  V T   +ALADE GI F ETSAK + NVEQ FL++A +IK+++    +  +  G
Sbjct: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQG 192

Query: 186 TVQMK-------GQPIEQKSSCCS 202
               K            +KS+CCS
Sbjct: 193 IKITKQDANKASSSSTNEKSACCS 216

The following BLAST results are available for this feature:

BLAST of MS012548 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136911.1	2.7e-103	100.00	ras-related protein RABD1 [Momordica charantia]	[more]
XP_022929522.1	1.2e-100	96.94	ras-related protein RABD1-like [Cucurbita moschata] >XP_022985018.1 ras-related ...	[more]
XP_008452238.1	1.6e-100	96.43	PREDICTED: ras-related protein RABD1 isoform X1 [Cucumis melo]	[more]
XP_004133726.1	1.6e-100	96.94	ras-related protein RABD1 [Cucumis sativus] >KGN56267.1 hypothetical protein Csa...	[more]
XP_022762717.1	1.0e-99	95.90	ras-related protein RABD1 [Durio zibethinus]	[more]

BLAST of MS012548 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRE2	1.2e-90	85.28	Ras-related protein RABD1 OS=Arabidopsis thaliana OX=3702 GN=RABD1 PE=1 SV=1	[more]
P40392	1.4e-86	80.71	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]
Q9SEH3	3.4e-85	79.08	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
Q05737	3.4e-85	80.20	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
P16976	4.9e-84	80.20	GTP-binding protein YPTM1 OS=Zea mays OX=4577 GN=YPTM1 PE=2 SV=2	[more]

BLAST of MS012548 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4U5	1.3e-103	100.00	ras-related protein RABD1 OS=Momordica charantia OX=3673 GN=LOC111008488 PE=4 SV...	[more]
A0A6J1JCC5	6.0e-101	96.94	ras-related protein RABD1-like OS=Cucurbita maxima OX=3661 GN=LOC111483110 PE=4 ...	[more]
A0A6J1EMZ9	6.0e-101	96.94	ras-related protein RABD1-like OS=Cucurbita moschata OX=3662 GN=LOC111436063 PE=...	[more]
A0A0A0L6Q4	7.8e-101	96.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110640 PE=4 SV=1	[more]
A0A1S3BTF1	7.8e-101	96.43	ras-related protein RABD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493312 PE=...	[more]

BLAST of MS012548 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11730.1	8.6e-92	85.28	Ras-related small GTP-binding family protein	[more]
AT4G17530.1	2.4e-86	79.08	RAB GTPase homolog 1C	[more]
AT5G47200.1	7.8e-85	78.57	RAB GTPase homolog 1A	[more]
AT1G02130.1	5.0e-84	77.66	RAS 5	[more]
AT3G09900.1	7.1e-62	58.82	RAB GTPase homolog E1E	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 9..30 score: 54.21 coord: 112..125 score: 53.03 coord: 147..169 score: 46.53 coord: 32..48 score: 35.74 coord: 50..72 score: 59.25
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..184 e-value: 0.01 score: -4.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..172 e-value: 2.8E-39 score: 146.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..172 e-value: 7.7E-110 score: 380.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..199 e-value: 5.0E-5 score: 22.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..201
None	No IPR available	PANTHER	PTHR47977:SF6	RAS-RELATED PROTEIN RABD2A-LIKE	coord: 5..201
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 5..201
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..170 score: 10.114626
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..201 score: 38.30658
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 7..172 e-value: 1.24468E-124 score: 347.009
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..170 e-value: 3.3E-17 score: 73.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..170 e-value: 2.0E-65 score: 219.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..201 score: 22.082409
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..164 e-value: 9.6E-35 score: 117.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..200 e-value: 8.2E-77 score: 259.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012548.1	MS012548.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding