MS012109 (gene) Bitter gourd (TR) v1

Overview


Name	MS012109
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CP12 domain-containing protein
Location	scaffold708: 364986 .. 365532 (+)
RNA-Seq Expression	MS012109
Synteny	MS012109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTCATTGGCCCTCATCCGATAAGAAATATGTGTTCCCCAAACGCATTGCGTGATCCAATTTCCCCAATTATATATCTCGAGAGGAAAAAAGAAAAAGAAAAAGAAAAAATCTCACTTATCAGTTATCCAATCCCACCGCTCCAGTTTCAGATTTTCCCACCGGAAAACTTCAAAATGGCAGCCATCTCCGGCGCGACCACGGCGGCCGCAAAAGCTCTGGCCAAACTCACCGACTCGCCGAAGTTAGAACCGTCGGTCCGGCTGAGCTACCCGTGGAGGAGCTGGACCGCCGGTCGACTTAGCGTCGGACCGGTGCGCGCCGCCCCGGACCGGATATCGGAGAAGGTGGCGGAGAGCATAAAGAACGCGGAGGAGACTTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTGAGCGCCGCCGCTAGCCACGCACGTGACCGGCAGAAGGAGTGGGACCCGCTGGAGAGTTTCTGTAAGGACAACCCGGAGACGGAAGAGTGTCGCACGTACGAGGAC

mRNA sequence

CTTTTTCATTGGCCCTCATCCGATAAGAAATATGTGTTCAACGCATTGCGTGATCCAATTTCCCCAATTATATATCTCGAGAGGAAAAAAGAAAAAGAAAAAGAAAAAATCTCACTTATCAGTTATCCAATCCCACCGCTCCAGTTTCAGATTTTCCCACCGGAAAACTTCAAAATGGCAGCCATCTCCGGCGCGACCACGGCGGCCGCAAAAGCTCTGGCCAAACTCACCGACTCGCCGAAGTTAGAACCGTCGGTCCGGCTGAGCTACCCGTGGAGGAGCTGGACCGCCGGTCGACTTAGCGTCGGACCGGTGCGCGCCGCCCCGGACCGGATATCGGAGAAGGTGGCGGAGAGCATAAAGAACGCGGAGGAGACTTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTGAGCGCCGCCGCTAGCCACGCACGTGACCGGCAGAAGGAGTGGGACCCGCTGGAGAGTTTCTGTAAGGACAACCCGGAGACGGAAGAGTGTCGCACGTACGAGGAC

Coding sequence (CDS)

CTTTTTCATTGGCCCTCATCCGATAAGAAATATGTGTTCAACGCATTGCGTGATCCAATTTCCCCAATTATATATCTCGAGAGGAAAAAAGAAAAAGAAAAAGAAAAAATCTCACTTATCAGTTATCCAATCCCACCGCTCCAGTTTCAGATTTTCCCACCGGAAAACTTCAAAATGGCAGCCATCTCCGGCGCGACCACGGCGGCCGCAAAAGCTCTGGCCAAACTCACCGACTCGCCGAAGTTAGAACCGTCGGTCCGGCTGAGCTACCCGTGGAGGAGCTGGACCGCCGGTCGACTTAGCGTCGGACCGGTGCGCGCCGCCCCGGACCGGATATCGGAGAAGGTGGCGGAGAGCATAAAGAACGCGGAGGAGACTTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTGAGCGCCGCCGCTAGCCACGCACGTGACCGGCAGAAGGAGTGGGACCCGCTGGAGAGTTTCTGTAAGGACAACCCGGAGACGGAAGAGTGTCGCACGTACGAGGAC

Protein sequence

LFHWPSSDKKYVFNALRDPISPIIYLERKKEKEKEKISLISYPIPPLQFQIFPPENFKMAAISGATTAAAKALAKLTDSPKLEPSVRLSYPWRSWTAGRLSVGPVRAAPDRISEKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPETEECRTYED

Homology

[Close]

BLAST of MS012109 vs. NCBI nr
Match: KGN45566.2 (hypothetical protein Csa_016698 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-45
Identity = 119/185 (64.32%), Postives = 134/185 (72.43%), Query Frame = 0


Query: 3   HWPSSDKKYVFNALRDPISPIIYLERKKEKEKEKISLIS--YPIPPLQFQIFPP--ENFK 62
           HWPSSDKK V   L+      +Y E   E+E++KISL S     PPL   I     +  K
Sbjct: 3   HWPSSDKKSV---LQSAWRIQLYTE---EEEEKKISLNSDLLSSPPLHSPIKKQKRKEKK 62

Query: 63  MAAISGATTAAAKALAKLTDSPKLE----PSVRLSYPWRSWTAGRLS-VGPVRAAPDRIS 122
           MAAI+G++ AA+KA   +TDSPK+E     S RLSYPW+ WT+GR+S VG V AAPDRIS
Sbjct: 63  MAAITGSSMAASKA---VTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRIS 122

Query: 123 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 179
           EKV ESIKNAE TCSEDPASGECAAAWDEVEELSAAASHARDR    DPLE FCKDNPET
Sbjct: 123 EKVVESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPET 178

[Close]

BLAST of MS012109 vs. NCBI nr
Match: XP_022991513.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 185.7 bits (470), Expect = 3.7e-43
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 59  MAAISGATTAAAKALAKLTDSPKLEP----SVRLSYPWRSWTAGRL-SVGPVRAAPDRIS 118
           MAAISGAT A +KA+A   DSPKLE     S RL+YPW+ W+A RL +VGPV AAPDRIS
Sbjct: 1   MAAISGATMAVSKAVA---DSPKLESPVLRSARLNYPWKRWSAVRLCAVGPVSAAPDRIS 60

Query: 119 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 178
           EKV ESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPET
Sbjct: 61  EKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPET 120

Query: 179 EECRTYED 182
           EECRTYED
Sbjct: 121 EECRTYED 125

[Close]

BLAST of MS012109 vs. NCBI nr
Match: XP_022953775.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-43
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 59  MAAISGATTAAAKALAKLTDSPKLEPSV----RLSYPWRSWTAGRL-SVGPVRAAPDRIS 118
           MAAISGAT A +KA+A   DSPKLE +V    RL YPW+ W+A RL +VGPV AAPDRIS
Sbjct: 1   MAAISGATMAVSKAVA---DSPKLESTVLRSARLYYPWKRWSAVRLRAVGPVSAAPDRIS 60

Query: 119 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 178
           EKV ESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPET
Sbjct: 61  EKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPET 120

Query: 179 EECRTYED 182
           EECRTYED
Sbjct: 121 EECRTYED 125

[Close]

BLAST of MS012109 vs. NCBI nr
Match: KAG6575763.1 (Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.5 bits (467), Expect = 8.1e-43
Identity = 102/128 (79.69%), Postives = 108/128 (84.38%), Query Frame = 0


Query: 59  MAAISGATTAAAKALAKLTDSPKLEP----SVRLSYPWRSWTAGRL-SVGPVRAAPDRIS 118
           MAAISGAT A +KA+A   DSPKLE     S RL YPW+ W+A RL +VGPV AAPDRIS
Sbjct: 1   MAAISGATMAVSKAVA---DSPKLESPVLRSARLYYPWKRWSAVRLRAVGPVSAAPDRIS 60

Query: 119 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 178
           EKV ESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPET
Sbjct: 61  EKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPET 120

Query: 179 EECRTYED 182
           EECRTYED
Sbjct: 121 EECRTYED 125

[Close]

BLAST of MS012109 vs. NCBI nr
Match: XP_023548709.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 4.0e-42
Identity = 100/128 (78.12%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 59  MAAISGATTAAAKALAKLTDSPKLEP----SVRLSYPWRSWTAGRL-SVGPVRAAPDRIS 118
           MAAISGAT   +KA+A   DSP LE     S RL+YPW+ W+A RL +VGPV AAPDRIS
Sbjct: 1   MAAISGATMGVSKAVA---DSPNLESPVLRSARLNYPWKRWSAVRLRAVGPVSAAPDRIS 60

Query: 119 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 178
           EKV ESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPET
Sbjct: 61  EKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPET 120

Query: 179 EECRTYED 182
           EECRTYED
Sbjct: 121 EECRTYED 125

[Close]

BLAST of MS012109 vs. ExPASy Swiss-Prot
Match: O22914 (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 68/125 (54.40%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 66  TTAAAKALAKLTDSPKLEP------SVRLSYPWRSWTAGRLSVGPVRAAPD-RISEKVAE 125
           TT AA  L   T    + P       VRL+YPW+  +  R+ V  V+A  +  ISEKV +
Sbjct: 2   TTIAAAGLNVATPRVVVRPVARVLGPVRLNYPWKFGSMKRMVV--VKATSEGEISEKVEK 61

Query: 126 SIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEW--DPLESFCKDNPETEEC 182
           SI+ A+ETC++DP SGEC AAWDEVEELSAAASHARD++K    DPLE +C DNPET+EC
Sbjct: 62  SIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDEC 121

[Close]

BLAST of MS012109 vs. ExPASy Swiss-Prot
Match: Q9LZP9 (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22
Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 86  VRLSYPWR--SWTAGR-LSVGPVRAAPD-RISEKVAESIKNAEETCSEDPASGECAAAWD 145
           V L+  W   S T  R + + P++AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWD
Sbjct: 30  VHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWD 89

Query: 146 EVEELSAAASHARDRQKE--WDPLESFCKDNPETEECRTYED 182
           EVEELSAAASHARD++K    DPLE +CKDNPET ECRTY++
Sbjct: 90  EVEELSAAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of MS012109 vs. ExPASy Swiss-Prot
Match: Q9C9K2 (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-12
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 110 DRISEKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQK--EWDPLESFC 169
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R + K    DPLESFC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 170 KDNPETEECRTYED 182
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]

BLAST of MS012109 vs. ExPASy Swiss-Prot
Match: A6Q0K5 (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-12
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 112 ISEKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKE----WDPLESFC 171
           +++KV +++K AE+ C++   S +CA AWD VEELSAA SH +D  K      DPLE+FC
Sbjct: 35  LNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFC 94

Query: 172 KDNPETEECRTYED 182
           KD P+ +ECR YED
Sbjct: 95  KDAPDADECRVYED 107

[Close]

BLAST of MS012109 vs. ExPASy TrEMBL
Match: A0A0A0K832 (CP12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407670 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 122/188 (64.89%), Postives = 137/188 (72.87%), Query Frame = 0


Query: 3   HWPSSDKKYVFNALRDPISPIIYLERKKEKEKEKISLIS--YPIPPLQFQIFPP--ENFK 62
           HWPSSDKK V   L+      +Y E   E+E++KISL S     PPL   I     +  K
Sbjct: 3   HWPSSDKKSV---LQSAWRIQLYTE---EEEEKKISLNSDLLSSPPLHSPIKKQKRKEKK 62

Query: 63  MAAISGATTAAAKALAKLTDSPKLE----PSVRLSYPWRSWTAGRLS-VGPVRAAPDRIS 122
           MAAI+G++ AA+KA   +TDSPK+E     S RLSYPW+ WT+GR+S VG V AAPDRIS
Sbjct: 63  MAAITGSSMAASKA---VTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRIS 122

Query: 123 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 182
           EKV ESIKNAE TCSEDPASGECAAAWDEVEELSAAASHARDR    DPLE FCKDNPET
Sbjct: 123 EKVVESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPET 181

[Close]

BLAST of MS012109 vs. ExPASy TrEMBL
Match: A0A6J1JWF5 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488107 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 59  MAAISGATTAAAKALAKLTDSPKLEP----SVRLSYPWRSWTAGRL-SVGPVRAAPDRIS 118
           MAAISGAT A +KA+A   DSPKLE     S RL+YPW+ W+A RL +VGPV AAPDRIS
Sbjct: 1   MAAISGATMAVSKAVA---DSPKLESPVLRSARLNYPWKRWSAVRLCAVGPVSAAPDRIS 60

Query: 119 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 178
           EKV ESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPET
Sbjct: 61  EKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPET 120

Query: 179 EECRTYED 182
           EECRTYED
Sbjct: 121 EECRTYED 125

[Close]

BLAST of MS012109 vs. ExPASy TrEMBL
Match: A0A6J1GQL5 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456202 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 3.0e-43
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 59  MAAISGATTAAAKALAKLTDSPKLEPSV----RLSYPWRSWTAGRL-SVGPVRAAPDRIS 118
           MAAISGAT A +KA+A   DSPKLE +V    RL YPW+ W+A RL +VGPV AAPDRIS
Sbjct: 1   MAAISGATMAVSKAVA---DSPKLESTVLRSARLYYPWKRWSAVRLRAVGPVSAAPDRIS 60

Query: 119 EKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPET 178
           EKV ESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPET
Sbjct: 61  EKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPET 120

Query: 179 EECRTYED 182
           EECRTYED
Sbjct: 121 EECRTYED 125

[Close]

BLAST of MS012109 vs. ExPASy TrEMBL
Match: A0A6J1KVB2 (calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111497914 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.8e-41
Identity = 98/126 (77.78%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 59  MAAISGATTAAAKALA--KLTDSPKLEPSVRLSYPWRSWTAGRLSV-GPVRAAPDRISEK 118
           MAAISG T AA KA+A  +  +SP L  S RLSY W+ WTAGR+SV GP  AAPDRISEK
Sbjct: 1   MAAISGTTMAALKAVADSQKPESPVLR-STRLSYQWKRWTAGRVSVAGPAAAAPDRISEK 60

Query: 119 VAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPETEE 178
           V ESIKNAEETCS+DP SGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPETEE
Sbjct: 61  VVESIKNAEETCSDDPESGECAAAWDEVEELSAAASHARDRLKDADPLEEFCKDNPETEE 120

Query: 179 CRTYED 182
           CRTYED
Sbjct: 121 CRTYED 125

[Close]

BLAST of MS012109 vs. ExPASy TrEMBL
Match: A0A5A7TUE8 (Calvin cycle protein CP12-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001700 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40
Identity = 95/119 (79.83%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 68  AAAKALAKLTDSPKLEPSV----RLSYPWRSWTAGRLS-VGPVRAAPDRISEKVAESIKN 127
           AA KA   +TDSPK+E  V    RLSYPW+ WT+GR+S VGPV AAPDRISEKV ESIKN
Sbjct: 2   AATKA---VTDSPKIESPVHRSSRLSYPWKRWTSGRMSAVGPVAAAPDRISEKVVESIKN 61

Query: 128 AEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEWDPLESFCKDNPETEECRTYED 182
           AE TCSEDPASGECAAAWDEVEELSAAASHARDR K+ DPLE FCKDNPETEECRTYED
Sbjct: 62  AEVTCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEECRTYED 117

[Close]

BLAST of MS012109 vs. TAIR 10
Match: AT2G47400.1 (CP12 domain-containing protein 1 )

HSP 1 Score: 114.8 bits (286), Expect = 7.4e-26
Identity = 68/125 (54.40%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 66  TTAAAKALAKLTDSPKLEP------SVRLSYPWRSWTAGRLSVGPVRAAPD-RISEKVAE 125
           TT AA  L   T    + P       VRL+YPW+  +  R+ V  V+A  +  ISEKV +
Sbjct: 2   TTIAAAGLNVATPRVVVRPVARVLGPVRLNYPWKFGSMKRMVV--VKATSEGEISEKVEK 61

Query: 126 SIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQKEW--DPLESFCKDNPETEEC 182
           SI+ A+ETC++DP SGEC AAWDEVEELSAAASHARD++K    DPLE +C DNPET+EC
Sbjct: 62  SIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDEC 121

[Close]

BLAST of MS012109 vs. TAIR 10
Match: AT3G62410.1 (CP12 domain-containing protein 2 )

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 86  VRLSYPWR--SWTAGR-LSVGPVRAAPD-RISEKVAESIKNAEETCSEDPASGECAAAWD 145
           V L+  W   S T  R + + P++AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWD
Sbjct: 30  VHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWD 89

Query: 146 EVEELSAAASHARDRQKE--WDPLESFCKDNPETEECRTYED 182
           EVEELSAAASHARD++K    DPLE +CKDNPET ECRTY++
Sbjct: 90  EVEELSAAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of MS012109 vs. TAIR 10
Match: AT1G76560.1 (CP12 domain-containing protein 3 )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 110 DRISEKVAESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRQK--EWDPLESFC 169
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R + K    DPLESFC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 170 KDNPETEECRTYED 182
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

The following BLAST results are available for this feature:

BLAST of MS012109 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45566.2	3.9e-45	64.32	hypothetical protein Csa_016698 [Cucumis sativus]	[more]
XP_022991513.1	3.7e-43	79.69	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022953775.1	6.2e-43	79.69	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6575763.1	8.1e-43	79.69	Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
XP_023548709.1	4.0e-42	78.13	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS012109 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22914	1.0e-24	54.40	Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
Q9LZP9	1.7e-22	59.80	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
Q9C9K2	1.6e-12	51.35	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
A6Q0K5	4.5e-12	51.35	Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN...	[more]

BLAST of MS012109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K832	2.0e-47	64.89	CP12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407670 PE=4 S...	[more]
A0A6J1JWF5	1.8e-43	79.69	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GQL5	3.0e-43	79.69	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KVB2	2.8e-41	77.78	calvin cycle protein CP12-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TUE8	1.8e-40	79.83	Calvin cycle protein CP12-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of MS012109 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47400.1	7.4e-26	54.40	CP12 domain-containing protein 1	[more]
AT3G62410.1	1.2e-23	59.80	CP12 domain-containing protein 2	[more]
AT1G76560.1	1.1e-13	51.35	CP12 domain-containing protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003823	Domain of unknown function CP12	SMART	SM01093	CP12_2	coord: 112..181 e-value: 6.5E-28 score: 108.7
IPR003823	Domain of unknown function CP12	PFAM	PF02672	CP12	coord: 112..180 e-value: 6.6E-26 score: 90.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..181
None	No IPR available	PANTHER	PTHR33921:SF15	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 59..181
IPR039314	Calvin cycle protein CP12-like	PANTHER	PTHR33921	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 59..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012109.1	MS012109.1	mRNA