MS011789 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTCTCCGCCCTAATGCCCGCCGCTCACTCTTCTCAGTCAGCGCAACTCCGCCTCAGAACTCGCCGGAAAATCAGTTTTCGGAAGCGGTGCTTGCGGATGATCAAGCAGCAGAAAACCAGATTCTACATCCTCGGACGTTGCATCTCCATGCTCCTCTGCTGGCACGACCACGATATCACCGAT GTCTCCGCCCTAATGCCCGCCGCTCACTCTTCTCAGTCAGCGCAACTCCGCCTCAGAACTCGCCGGAAAATCAGTTTTCGGAAGCGGTGCTTGCGGATGATCAAGCAGCAGAAAACCAGATTCTACATCCTCGGACGTTGCATCTCCATGCTCCTCTGCTGGCACGACCACGATATCACCGAT GTCTCCGCCCTAATGCCCGCCGCTCACTCTTCTCAGTCAGCGCAACTCCGCCTCAGAACTCGCCGGAAAATCAGTTTTCGGAAGCGGTGCTTGCGGATGATCAAGCAGCAGAAAACCAGATTCTACATCCTCGGACGTTGCATCTCCATGCTCCTCTGCTGGCACGACCACGATATCACCGAT VSALMPAAHSSQSAQLRLRTRRKISFRKRCLRMIKQQKTRFYILGRCISMLLCWHDHDITD Homology
BLAST of MS011789 vs. NCBI nr
Match: KGN60637.1 (hypothetical protein Csa_019376 [Cucumis sativus]) HSP 1 Score: 103.2 bits (256), Expect = 8.0e-19 Identity = 50/61 (81.97%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of MS011789 vs. NCBI nr
Match: KAG6586417.1 (hypothetical protein SDJN03_19150, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17 Identity = 52/61 (85.25%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of MS011789 vs. NCBI nr
Match: KAG7030417.1 (hypothetical protein SDJN02_08764, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 89.7 bits (221), Expect = 9.2e-15 Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of MS011789 vs. NCBI nr
Match: XP_042976770.1 (small polypeptide DEVIL 10 [Carya illinoinensis] >KAG2713199.1 hypothetical protein I3760_04G165100 [Carya illinoinensis] >KAG6658515.1 hypothetical protein CIPAW_04G167100 [Carya illinoinensis] >KAG6718716.1 hypothetical protein I3842_04G166200 [Carya illinoinensis] >KAG7984358.1 hypothetical protein I3843_04G156200 [Carya illinoinensis]) HSP 1 Score: 80.5 bits (197), Expect = 5.6e-12 Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of MS011789 vs. NCBI nr
Match: RXI05912.1 (hypothetical protein DVH24_017954 [Malus domestica]) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MS011789 vs. ExPASy Swiss-Prot
Match: Q6IM91 (Small polypeptide DEVIL 10 OS=Arabidopsis thaliana OX=3702 GN=DVL10 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.2e-09 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MS011789 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05 Identity = 18/36 (50.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of MS011789 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-05 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of MS011789 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 5.3e-05 Identity = 18/48 (37.50%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MS011789 vs. ExPASy Swiss-Prot
Match: Q6IM86 (Small polypeptide DEVIL 15 OS=Arabidopsis thaliana OX=3702 GN=DVL15 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.2e-04 Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MS011789 vs. ExPASy TrEMBL
Match: A0A0A0LIV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005340 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.9e-19 Identity = 50/61 (81.97%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of MS011789 vs. ExPASy TrEMBL
Match: A0A498KJW8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017954 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.9e-12 Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MS011789 vs. ExPASy TrEMBL
Match: A0A7J6F8M0 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006385 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of MS011789 vs. ExPASy TrEMBL
Match: A0A2P6RJL2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0091061 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-11 Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of MS011789 vs. ExPASy TrEMBL
Match: A0A6P5S1D1 (uncharacterized protein LOC110751101 OS=Prunus avium OX=42229 GN=LOC110751101 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.1e-11 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0
BLAST of MS011789 vs. TAIR 10
Match: AT4G13395.1 (ROTUNDIFOLIA like 12 ) HSP 1 Score: 63.2 bits (152), Expect = 8.6e-11 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MS011789 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 ) HSP 1 Score: 50.1 bits (118), Expect = 7.5e-07 Identity = 18/36 (50.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of MS011789 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein ) HSP 1 Score: 48.9 bits (115), Expect = 1.7e-06 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of MS011789 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 ) HSP 1 Score: 47.8 bits (112), Expect = 3.7e-06 Identity = 18/48 (37.50%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of MS011789 vs. TAIR 10
Match: AT3G46613.1 (ROTUNDIFOLIA like 4 ) HSP 1 Score: 46.6 bits (109), Expect = 8.3e-06 Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|