MS011750 (gene) Bitter gourd (TR) v1

Overview


Name	MS011750
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold11: 406335 .. 407402 (-)
RNA-Seq Expression	MS011750
Synteny	MS011750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTGTAAGACACAATTTTTTACATGTTTTTTTACAGAGGAAGTGTTTGTTTTTTGGTAGGGGCACTAAGCCTGCACCAGCCATCTCTGGGAATAATCAGAATGCAAAGATGCCTAGCATGTCAGATGACTTTTGGAGTACAAGCACATGTGATCTTGATGAGATGTATACGGCTCAGTCTCAACAAATCTCATCTATCAGCTCAACGAACCACAACCCTGATCATGGAGGTGGCACTGGCCATTTGAGCAATCATTCTGACTTTGTAAATCATGGTACAAACTCAGATCTTATGTTGTTCACTGTTTGTTGCAAAGAAAAATAGATGTTTTTTTTCTGGATGCTTGCTTGTGTATTCTTCATATAGTTTTAGCACCAGCACTTCTGTCGCTGTTTTAGTCTGGTTTTACGCAAGTCTATTTGTATCAATGAAAAATTAAACTTGGTTACGCAATTCTATTCTGGATTGCAGGTTTTGTCCTTTGGACTCAGACCAGGCTTGGATGGCTCGGAAATTGTGAGTCTGCTAAGAAAACTAAAAAGAACCATCTTCCAGGATTAAGGTGAGTTACTGTTTGTATCTACTTTTGACAAATTTACATACACATTCTATGTCATTAACCTTGCTGTTATATAAGATATATTGCTACATGGTTATAATGCGAATGAAATTCTTTTCTTGTCGATCTTTCTTGCAATTAATTGAATATTTTCTTCTATCATTCTTTAGTTGGAAATTTTGTGTCATTAAAATCAGGTGGAGGTCAAATTTCCTGTGGATTTAATTGTTTCCGAACTTTGACTCATATCAAATTTTTGTTCCTACTATAATTGCTTCGTTTCTGTTTGCAGTTGGTATATGACTAAAGAACTCTTGCTGGAAAGCAAAAAACCTTTCCATCGGCGCATACCGTTATCTGTAAGTATGCCCTTTGTCTGTAATCTGATGTTTTCTTTAGTTGACTACTCATTCAAATCCTCTGCTCTGAATATCTTATCATGATATAATTGACAGGACATGGTAGATTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTAT

mRNA sequence

GTTTGTGTAAGACACAATTTTTTACATGTTTTTTTACAGAGGAAGTGTTTGTTTTTTGGTAGGGGCACTAAGCCTGCACCAGCCATCTCTGGGAATAATCAGAATGCAAAGATGCCTAGCATGTCAGATGACTTTTGGAGTACAAGCACATGTGATCTTGATGAGATGTATACGGCTCAGTCTCAACAAATCTCATCTATCAGCTCAACGAACCACAACCCTGATCATGGAGGTGGCACTGGCCATTTGAGCAATCATTCTGACTTTGTAAATCATGGTTTTGTCCTTTGGACTCAGACCAGGCTTGGATGGCTCGGAAATTGTGAGTCTGCTAAGAAAACTAAAAAGAACCATCTTCCAGGATTAAGTTGGTATATGACTAAAGAACTCTTGCTGGAAAGCAAAAAACCTTTCCATCGGCGCATACCGTTATCTGACATGGTAGATTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTAT

Coding sequence (CDS)

GTTTGTGTAAGACACAATTTTTTACATGTTTTTTTACAGAGGAAGTGTTTGTTTTTTGGTAGGGGCACTAAGCCTGCACCAGCCATCTCTGGGAATAATCAGAATGCAAAGATGCCTAGCATGTCAGATGACTTTTGGAGTACAAGCACATGTGATCTTGATGAGATGTATACGGCTCAGTCTCAACAAATCTCATCTATCAGCTCAACGAACCACAACCCTGATCATGGAGGTGGCACTGGCCATTTGAGCAATCATTCTGACTTTGTAAATCATGGTTTTGTCCTTTGGACTCAGACCAGGCTTGGATGGCTCGGAAATTGTGAGTCTGCTAAGAAAACTAAAAAGAACCATCTTCCAGGATTAAGTTGGTATATGACTAAAGAACTCTTGCTGGAAAGCAAAAAACCTTTCCATCGGCGCATACCGTTATCTGACATGGTAGATTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTAT

Protein sequence

VCVRHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

Homology

[Close]

BLAST of MS011750 vs. NCBI nr
Match: XP_022143002.1 (uncharacterized protein LOC111012992 isoform X1 [Momordica charantia])

HSP 1 Score: 300.4 bits (768), Expect = 9.1e-78
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 22  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTG 81
           GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTG
Sbjct: 21  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTG 80

Query: 82  HLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR 141
           HLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR
Sbjct: 81  HLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR 140

Query: 142 IPLSDMVDFLVEEWEEEGLYY 163
           IPLSDMVDFLVEEWEEEGLYY
Sbjct: 141 IPLSDMVDFLVEEWEEEGLYY 161

[Close]

BLAST of MS011750 vs. NCBI nr
Match: XP_022143003.1 (uncharacterized protein LOC111012992 isoform X2 [Momordica charantia])

HSP 1 Score: 267.3 bits (682), Expect = 8.5e-68
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 38  MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW 97
           MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW
Sbjct: 1   MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW 60

Query: 98  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEE 157
           TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEE
Sbjct: 61  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEE 120

Query: 158 EGLYY 163
           EGLYY
Sbjct: 121 EGLYY 125

[Close]

BLAST of MS011750 vs. NCBI nr
Match: XP_038889429.1 (uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida])

HSP 1 Score: 252.7 bits (644), Expect = 2.2e-63
Identity = 121/159 (76.10%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 4   RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQ 63
           R +++ V++ R     G G KPAPAISGNN N++MPSMSDDFWSTSTCD DEM T QS+Q
Sbjct: 4   RESWISVWIDRLLSCLG-GIKPAPAISGNNLNSRMPSMSDDFWSTSTCDPDEMLTLQSRQ 63

Query: 64  ISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS 123
            S IS+TNHN +HGGGT +L NHSDFVNHGFVLWTQTRL W+GNC  AK+TKKNHL GLS
Sbjct: 64  NSFISTTNHNSNHGGGTDNLRNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKNHLTGLS 123

Query: 124 WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY 163
           WYMTKELLLESKKP+HRRIPLS+MVDFLVEEWEEEGLYY
Sbjct: 124 WYMTKELLLESKKPYHRRIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of MS011750 vs. NCBI nr
Match: XP_016903413.1 (PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 2.7e-61
Identity = 118/165 (71.52%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 4   RHNFLHVFLQR--KCL----FFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMY 63
           R ++  V++ R   CL     FGR  KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ 
Sbjct: 4   RESWFSVWIDRLLSCLGVNVCFGRSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELL 63

Query: 64  TAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKN 123
           T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL W+GNC  AK+TKK+
Sbjct: 64  TLQSRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKS 123

Query: 124 HLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY 163
           H+ GLSWYMTKELLLE++KP+HRRIPLS+MVDFLVEEWEEEGLYY
Sbjct: 124 HITGLSWYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 168

[Close]

BLAST of MS011750 vs. NCBI nr
Match: XP_004139307.1 (uncharacterized protein LOC101220352 [Cucumis sativus] >KGN60683.1 hypothetical protein Csa_019419 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 7.7e-61
Identity = 116/159 (72.96%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 4   RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQ 63
           R ++  V++ R     G   KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q
Sbjct: 4   RESWFSVWIDRLLSCLG-SIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQSRQ 63

Query: 64  ISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS 123
            S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL W+GNC  AK+TKKNH+ GLS
Sbjct: 64  NSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKNHITGLS 123

Query: 124 WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY 163
           WYMTKELLLE++KP+HRRIPLSDMVDFLVEEWEEEGLYY
Sbjct: 124 WYMTKELLLETRKPYHRRIPLSDMVDFLVEEWEEEGLYY 161

[Close]

BLAST of MS011750 vs. ExPASy TrEMBL
Match: A0A6J1CPI5 (uncharacterized protein LOC111012992 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012992 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.4e-78
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 22  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTG 81
           GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTG
Sbjct: 21  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTG 80

Query: 82  HLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR 141
           HLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR
Sbjct: 81  HLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR 140

Query: 142 IPLSDMVDFLVEEWEEEGLYY 163
           IPLSDMVDFLVEEWEEEGLYY
Sbjct: 141 IPLSDMVDFLVEEWEEEGLYY 161

[Close]

BLAST of MS011750 vs. ExPASy TrEMBL
Match: A0A6J1CPN5 (uncharacterized protein LOC111012992 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012992 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 38  MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW 97
           MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW
Sbjct: 1   MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW 60

Query: 98  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEE 157
           TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEE
Sbjct: 61  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEE 120

Query: 158 EGLYY 163
           EGLYY
Sbjct: 121 EGLYY 125

[Close]

BLAST of MS011750 vs. ExPASy TrEMBL
Match: A0A1S4E5A2 (uncharacterized protein LOC103503177 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503177 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 118/165 (71.52%), Postives = 138/165 (83.64%), Query Frame = 0


Query: 4   RHNFLHVFLQR--KCL----FFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMY 63
           R ++  V++ R   CL     FGR  KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ 
Sbjct: 4   RESWFSVWIDRLLSCLGVNVCFGRSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELL 63

Query: 64  TAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKN 123
           T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL W+GNC  AK+TKK+
Sbjct: 64  TLQSRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKS 123

Query: 124 HLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY 163
           H+ GLSWYMTKELLLE++KP+HRRIPLS+MVDFLVEEWEEEGLYY
Sbjct: 124 HITGLSWYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 168

[Close]

BLAST of MS011750 vs. ExPASy TrEMBL
Match: A0A0A0LFZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006290 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.7e-61
Identity = 116/159 (72.96%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 4   RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQ 63
           R ++  V++ R     G   KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q
Sbjct: 4   RESWFSVWIDRLLSCLG-SIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQSRQ 63

Query: 64  ISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS 123
            S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL W+GNC  AK+TKKNH+ GLS
Sbjct: 64  NSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKNHITGLS 123

Query: 124 WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY 163
           WYMTKELLLE++KP+HRRIPLSDMVDFLVEEWEEEGLYY
Sbjct: 124 WYMTKELLLETRKPYHRRIPLSDMVDFLVEEWEEEGLYY 161

[Close]

BLAST of MS011750 vs. ExPASy TrEMBL
Match: A0A1S3CQL1 (uncharacterized protein LOC103503177 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503177 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.1e-60
Identity = 114/159 (71.70%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 4   RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQ 63
           R ++  V++ R     G   KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q
Sbjct: 4   RESWFSVWIDRLLSCLG-SIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQSRQ 63

Query: 64  ISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS 123
            S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL W+GNC  AK+TKK+H+ GLS
Sbjct: 64  NSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKSHITGLS 123

Query: 124 WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY 163
           WYMTKELLLE++KP+HRRIPLS+MVDFLVEEWEEEGLYY
Sbjct: 124 WYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of MS011750 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-26
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 24  KPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHL 83
           +P+  +    +  K PS+S+DFWSTSTC++D       + +SSIS TN+       +   
Sbjct: 36  EPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSISFTNNT----STSAST 95

Query: 84  SNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIP 143
           SN ++FVNHG  LW QTR  WL N  S KK K    P +SW  T E LL   K F R IP
Sbjct: 96  SNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVRE-PTISWNATYESLLGMNKRFSRPIP 155

Query: 144 LSDMVDFLVEEWEEEGLY 162
           L +MVDFLV+ WE+EGLY
Sbjct: 156 LPEMVDFLVDVWEQEGLY 168

[Close]

BLAST of MS011750 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-26
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 24  KPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHL 83
           +P+  +    +  K PS+S+DFWSTSTC++D       + +SSIS TN+       +   
Sbjct: 36  EPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSISFTNNT----STSAST 95

Query: 84  SNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIP 143
           SN ++FVNHG  LW QTR  WL N  S KK K    P +SW  T E LL   K F R IP
Sbjct: 96  SNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVRE-PTISWNATYESLLGMNKRFSRPIP 155

Query: 144 LSDMVDFLVEEWEEEGLY 162
           L +MVDFLV+ WE+EGLY
Sbjct: 156 LPEMVDFLVDVWEQEGLY 168

[Close]

BLAST of MS011750 vs. TAIR 10
Match: AT3G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.4e-20
Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 42  SDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTR 101
           S+DFW+ +T D++   +     +SSIS+TN   D  G     +  ++FVNHG VLW QTR
Sbjct: 45  SEDFWTNTTLDME---SNAHGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTR 104

Query: 102 LGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLY 161
             W+G+  S  +      P L+  +T E LL S K F R IPL +MV FLVE WEEEGLY
Sbjct: 105 QQWVGDKRSESRKSVGREPILNENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 161

[Close]

BLAST of MS011750 vs. TAIR 10
Match: AT3G15770.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.4e-20
Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 42  SDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTR 101
           S+DFW+ +T D++   +     +SSIS+TN   D  G     +  ++FVNHG VLW QTR
Sbjct: 44  SEDFWTNTTLDME---SNAHGSVSSISTTNLTIDSQGCGSSSNEPAEFVNHGLVLWNQTR 103

Query: 102 LGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLY 161
             W+G+  S  +      P L+  +T E LL S K F R IPL +MV FLVE WEEEGLY
Sbjct: 104 QQWVGDKRSESRKSVGREPILNENVTYESLLGSNKRFPRPIPLDEMVQFLVEVWEEEGLY 160

[Close]

BLAST of MS011750 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-19
Identity = 57/125 (45.60%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 37  KMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVL 96
           K  + SDDFWSTSTCD+D   T QSQ      S+N   D    T   SN ++FVNHG +L
Sbjct: 47  KDSASSDDFWSTSTCDMDHNITIQSQ------SSNPPFDPQCST---SNSTEFVNHGLIL 106

Query: 97  WTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWE 156
           W  TR  W   C + ++      P +SW  T + LL + K F + IPL +MV FLV+ WE
Sbjct: 107 WNHTRQQW-RECLTRQQCLVPE-PAISWNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWE 160

Query: 157 EEGLY 162
           EEGLY
Sbjct: 167 EEGLY 160

The following BLAST results are available for this feature:

BLAST of MS011750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143002.1	9.1e-78	100.00	uncharacterized protein LOC111012992 isoform X1 [Momordica charantia]	[more]
XP_022143003.1	8.5e-68	100.00	uncharacterized protein LOC111012992 isoform X2 [Momordica charantia]	[more]
XP_038889429.1	2.2e-63	76.10	uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida]	[more]
XP_016903413.1	2.7e-61	71.52	PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo]	[more]
XP_004139307.1	7.7e-61	72.96	uncharacterized protein LOC101220352 [Cucumis sativus] >KGN60683.1 hypothetical ...	[more]

BLAST of MS011750 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS011750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPI5	4.4e-78	100.00	uncharacterized protein LOC111012992 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CPN5	4.1e-68	100.00	uncharacterized protein LOC111012992 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S4E5A2	1.3e-61	71.52	uncharacterized protein LOC103503177 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LFZ6	3.7e-61	72.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006290 PE=4 SV=1	[more]
A0A1S3CQL1	4.1e-60	71.70	uncharacterized protein LOC103503177 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS011750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	1.0e-26	46.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	1.0e-26	46.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G15770.1	5.4e-20	45.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G15770.2	5.4e-20	45.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32342.1	2.7e-19	45.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 49..117 e-value: 1.1E-6 score: 29.1 coord: 125..161 e-value: 2.1E-7 score: 31.5
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 32..161
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 32..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011750.1	MS011750.1	mRNA