MS011422 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAATGGGCTCTAAGTTTTTAACATACTTCTTCATATTCATGATTTTGTGTCACCAACTTGTTGTTATCGAAGGAGGGAGAAGTCTGAAGGTAAAGAAAAAGCAGCTGCGGTGTGGGAGTTGCTCAAGTCCTGACGTTGCAATCGCCATAACCACCAAACAGGGCGCAGGAAAAAGCAGCAAAAATAATAATAATGCTAAAAGCAGAGCCTCCCTACGGCAGCTGCACCACAGAAGCGCCGATGGGTTTGTGGATGCCTTCCGCCCCACCACACCTGGACACAGCCCCGGCGTTGGCCACTCCATTCAAAAC AAAATGGGCTCTAAGTTTTTAACATACTTCTTCATATTCATGATTTTGTGTCACCAACTTGTTGTTATCGAAGGAGGGAGAAGTCTGAAGGTAAAGAAAAAGCAGCTGCGGTGTGGGAGTTGCTCAAGTCCTGACGTTGCAATCGCCATAACCACCAAACAGGGCGCAGGAAAAAGCAGCAAAAATAATAATAATGCTAAAAGCAGAGCCTCCCTACGGCAGCTGCACCACAGAAGCGCCGATGGGTTTGTGGATGCCTTCCGCCCCACCACACCTGGACACAGCCCCGGCGTTGGCCACTCCATTCAAAAC AAAATGGGCTCTAAGTTTTTAACATACTTCTTCATATTCATGATTTTGTGTCACCAACTTGTTGTTATCGAAGGAGGGAGAAGTCTGAAGGTAAAGAAAAAGCAGCTGCGGTGTGGGAGTTGCTCAAGTCCTGACGTTGCAATCGCCATAACCACCAAACAGGGCGCAGGAAAAAGCAGCAAAAATAATAATAATGCTAAAAGCAGAGCCTCCCTACGGCAGCTGCACCACAGAAGCGCCGATGGGTTTGTGGATGCCTTCCGCCCCACCACACCTGGACACAGCCCCGGCGTTGGCCACTCCATTCAAAAC KMGSKFLTYFFIFMILCHQLVVIEGGRSLKVKKKQLRCGSCSSPDVAIAITTKQGAGKSSKNNNNAKSRASLRQLHHRSADGFVDAFRPTTPGHSPGVGHSIQN Homology
BLAST of MS011422 vs. NCBI nr
Match: KGN48514.1 (hypothetical protein Csa_002922 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of MS011422 vs. NCBI nr
Match: TYK12898.1 (hypothetical protein E5676_scaffold255G004920 [Cucumis melo var. makuwa]) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20 Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of MS011422 vs. NCBI nr
Match: KAG6604188.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.1 bits (240), Expect = 9.8e-17 Identity = 58/103 (56.31%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of MS011422 vs. NCBI nr
Match: KAG6663182.1 (hypothetical protein CIPAW_02G009300 [Carya illinoinensis]) HSP 1 Score: 73.9 bits (180), Expect = 8.9e-10 Identity = 44/95 (46.32%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of MS011422 vs. NCBI nr
Match: KAG2719845.1 (hypothetical protein I3760_02G010000 [Carya illinoinensis]) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09 Identity = 44/95 (46.32%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of MS011422 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.8e-04 Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 0
BLAST of MS011422 vs. ExPASy TrEMBL
Match: A0A0A0KIB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490780 PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 6.4e-22 Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of MS011422 vs. ExPASy TrEMBL
Match: A0A5D3CP07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004920 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 7.1e-21 Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of MS011422 vs. ExPASy TrEMBL
Match: A0A7N2M1D5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 9.6e-10 Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of MS011422 vs. ExPASy TrEMBL
Match: V4SPP4 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027106mg PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 8.1e-09 Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 0
BLAST of MS011422 vs. ExPASy TrEMBL
Match: U5G8B4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G041500 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of MS011422 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 4.1e-05 Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 0
BLAST of MS011422 vs. TAIR 10
Match: AT2G23440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04 Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 0
BLAST of MS011422 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 4.6e-04 Identity = 15/20 (75.00%), Postives = 19/20 (95.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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