MS011378 (gene) Bitter gourd (TR) v1

Overview


Name	MS011378
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	HTH-type transcriptional regulator protein ptxE
Location	scaffold239: 1442613 .. 1443077 (-)
RNA-Seq Expression	MS011378
Synteny	MS011378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTTGCAGTTCATCGGAATCCACCGCCCTCGCCACCGCCAAACTGATCCTCCACGATGGAACTCTGCAGGAGTTTTCGTACCCAGTCAAGGTTTCGTACGTCCTTCAAAAGAATCCGTCGTGCTTCATCTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGGCCGCCATTAGTGACGACGAAGAGCTTCAACTCGGTCAACTCTATTTCGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGCCGGAGGAAATGGCGGCATTGGCCGTTAAGGCCAACTCTGCGCTCATGAAATGCGGCGGCGGAGAGAAATGCGGCCACCGCCGGAGATCAGTGTCTCCGGCGGTTTTAACCGTCGAGGAACTGAAGACTCGCGAGCGAGTGGCTGCCGGCCGTCGCGGCGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGACGGCGATTCCCGAG

mRNA sequence

ATGGGTATTTGCAGTTCATCGGAATCCACCGCCCTCGCCACCGCCAAACTGATCCTCCACGATGGAACTCTGCAGGAGTTTTCGTACCCAGTCAAGGTTTCGTACGTCCTTCAAAAGAATCCGTCGTGCTTCATCTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGGCCGCCATTAGTGACGACGAAGAGCTTCAACTCGGTCAACTCTATTTCGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGCCGGAGGAAATGGCGGCATTGGCCGTTAAGGCCAACTCTGCGCTCATGAAATGCGGCGGCGGAGAGAAATGCGGCCACCGCCGGAGATCAGTGTCTCCGGCGGTTTTAACCGTCGAGGAACTGAAGACTCGCGAGCGAGTGGCTGCCGGCCGTCGCGGCGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGACGGCGATTCCCGAG

Coding sequence (CDS)

ATGGGTATTTGCAGTTCATCGGAATCCACCGCCCTCGCCACCGCCAAACTGATCCTCCACGATGGAACTCTGCAGGAGTTTTCGTACCCAGTCAAGGTTTCGTACGTCCTTCAAAAGAATCCGTCGTGCTTCATCTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGGCCGCCATTAGTGACGACGAAGAGCTTCAACTCGGTCAACTCTATTTCGCGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGCCGGAGGAAATGGCGGCATTGGCCGTTAAGGCCAACTCTGCGCTCATGAAATGCGGCGGCGGAGAGAAATGCGGCCACCGCCGGAGATCAGTGTCTCCGGCGGTTTTAACCGTCGAGGAACTGAAGACTCGCGAGCGAGTGGCTGCCGGCCGTCGCGGCGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGACGGCGATTCCCGAG

Protein sequence

MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

Homology

[Close]

BLAST of MS011378 vs. NCBI nr
Match: XP_004141948.1 (uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hypothetical protein Csa_004291 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-70
Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSESTA+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +DDEELQLGQLYFALPL+RLKQPLQ EEMAALAVKANSALMKC GG+KCGHRRRSVSP V
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAG-RGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of MS011378 vs. NCBI nr
Match: XP_008440178.1 (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo] >TYK12939.1 HTH-type transcriptional regulator protein ptxE [Cucumis melo var. makuwa])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 139/155 (89.68%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +DDEELQ+GQLYFALPL+RL+QPLQ EEMAALAVKANSALMKC GG+KCGHRRRSVSP V
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAG-RGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of MS011378 vs. NCBI nr
Match: XP_038883003.1 (uncharacterized protein LOC120074082 [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 140/155 (90.32%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQ NPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQNNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           SDDEELQLGQLYFALPL+RLKQPLQ EEMAALAVKANSALMKCGGG+KC HRRRSVSP V
Sbjct: 61  SDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCGGGDKCSHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+RVAAG RGGAGGR+KFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAG-RGGAGGRRKFAANLMAIPE 154

[Close]

BLAST of MS011378 vs. NCBI nr
Match: XP_023518464.1 (uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 4.8e-68
Identity = 138/155 (89.03%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSESTA+ATAKLIL+DG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           SDDEELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSALMKCG G+KC HRRRSVSP V
Sbjct: 61  SDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+R++AG R GAGGR KFAANL+AIPE
Sbjct: 121 FTVEELKTRKRLSAG-RSGAGGRTKFAANLSAIPE 154

[Close]

BLAST of MS011378 vs. NCBI nr
Match: XP_022963140.1 (uncharacterized protein LOC111463438 [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 8.2e-68
Identity = 137/155 (88.39%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSESTA+ATAKLIL+DG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +D+EELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSALMKCG G+KC HRRRSVSP V
Sbjct: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+R++AG R GAGGRKKFAANL+AIPE
Sbjct: 121 FTVEELKTRKRLSAG-RSGAGGRKKFAANLSAIPE 154

[Close]

BLAST of MS011378 vs. ExPASy TrEMBL
Match: A0A0A0KJB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.0e-71
Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSESTA+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESTAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +DDEELQLGQLYFALPL+RLKQPLQ EEMAALAVKANSALMKC GG+KCGHRRRSVSP V
Sbjct: 61  NDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAG-RGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of MS011378 vs. ExPASy TrEMBL
Match: A0A5D3CRH4 (HTH-type transcriptional regulator protein ptxE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005340 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.2e-70
Identity = 139/155 (89.68%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +DDEELQ+GQLYFALPL+RL+QPLQ EEMAALAVKANSALMKC GG+KCGHRRRSVSP V
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAG-RGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of MS011378 vs. ExPASy TrEMBL
Match: A0A1S3B0H3 (uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.2e-70
Identity = 139/155 (89.68%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +DDEELQ+GQLYFALPL+RL+QPLQ EEMAALAVKANSALMKC GG+KCGHRRRSVSP V
Sbjct: 61  NDDEELQIGQLYFALPLNRLRQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Sbjct: 121 FTVEELKTRKRVAAG-RGGAGGRKKFAANLMAIPE 154

[Close]

BLAST of MS011378 vs. ExPASy TrEMBL
Match: A0A6J1KPP1 (uncharacterized protein LOC111497150 OS=Cucurbita maxima OX=3661 GN=LOC111497150 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSESTA+ATAKLIL+DGTLQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESTAVATAKLILNDGTLQEFSYPVKVSYILQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           SD+EELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSALMKCG G+KC HRRRSVSP V
Sbjct: 61  SDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPVV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
             +EELKTR+R++AG R GAGGR KFAANLTAIPE
Sbjct: 121 FAIEELKTRKRLSAG-RSGAGGRNKFAANLTAIPE 154

[Close]

BLAST of MS011378 vs. ExPASy TrEMBL
Match: A0A6J1HH54 (uncharacterized protein LOC111463438 OS=Cucurbita moschata OX=3662 GN=LOC111463438 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 137/155 (88.39%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSESTA+ATAKLIL+DG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI
Sbjct: 1   MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           +D+EELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSALMKCG G+KC HRRRSVSP V
Sbjct: 61  NDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCSHRRRSVSPLV 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
            TVEELKTR+R++AG R GAGGRKKFAANL+AIPE
Sbjct: 121 FTVEELKTRKRLSAG-RSGAGGRKKFAANLSAIPE 154

[Close]

BLAST of MS011378 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-45
Identity = 98/163 (60.12%), Postives = 116/163 (71.17%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSS EST +ATAKLILHDG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ ++AI
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGG---EKCGHRRRSVS 120
           S DEE QLGQLYFALPLS L   L+ EEMAALAVKA+SALM+ GG    +KC  RR+ VS
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PAVLTVEELKT-----RERVAAGRRGGAGGRKKFAANLTAIPE 156
           P + +   +         R    R GG  GR+K+AA L+ I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRGGGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of MS011378 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 169.5 bits (428), Expect = 2.2e-42
Identity = 104/175 (59.43%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MGICSSSEST +ATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA+AAI
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
           S DEELQLGQ+YFALPL  L+QPL+ EEMAALAVKA+SALM+ GGG   G RR+ V P V
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGG---GCRRKCVEPIV 120

Query: 121 LTVEELKTRERVAAG-------------RRGGAGG-------RKKFAANLTAIPE 156
                 K R RV +G             R G  GG       RK +AA L+ I E
Sbjct: 121 SD----KLRMRVGSGDDTVGSGSGRRKVRNGDGGGSVSSSRRRKCYAAELSTIDE 168

[Close]

BLAST of MS011378 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 147.5 bits (371), Expect = 8.8e-36
Identity = 84/156 (53.85%), Postives = 106/156 (67.95%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MG C+S ES    +AKLIL DGTLQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA++A+
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGG-GEKCGHRRRSVSPA 120
           + +EEL+ GQLYF LPL+ L  PL+ EEMAALAVKA+SAL K GG G   G    + S  
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGWVSGDDDVTTSEK 120

Query: 121 VLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
               + +   +    G RG   G+++F ANL+ I E
Sbjct: 121 TYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of MS011378 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-35
Identity = 83/155 (53.55%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 1   MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAI 60
           MG C+S ES    TAKLIL DGTLQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+ A+
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  SDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCGHRRRSVSPAV 120
              E+L+ G+LYF LPL+ L  PL+ +EMAALAVKA+SAL K GGG   G          
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGG---GLSYNDEDVGE 120

Query: 121 LTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE 156
             V  +K       G  GG  GR+KF A L++I E
Sbjct: 121 CRVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of MS011378 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 9.1e-17
Identity = 55/153 (35.95%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 1   MGICSSSES----TALATAKLILHDGTLQEFSYPVKVSYVLQ----------KNPSCFIC 60
           MG+C S       ++  TAK++  +G L+E+  PV  S VL+           + S F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGG 120
           NSD + +DD + AI  DE LQ  Q+YF LP+S+ +  L   +MAALAVKA+ A+ K  G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

Query: 121 EKCGHRRRSVSPAVLTVEELKTRERVAAGRRGG 140
           +    R   +SP V   +    R      R GG
Sbjct: 121 KNRRRRSGRISPVVTLNQANDNRIAAVNNRIGG 153

The following BLAST results are available for this feature:

BLAST of MS011378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141948.1	1.0e-70	91.61	uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hypothetical ...	[more]
XP_008440178.1	1.5e-69	89.68	PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo] >TYK12939.1 HTH-t...	[more]
XP_038883003.1	1.5e-69	90.32	uncharacterized protein LOC120074082 [Benincasa hispida]	[more]
XP_023518464.1	4.8e-68	89.03	uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]	[more]
XP_022963140.1	8.2e-68	88.39	uncharacterized protein LOC111463438 [Cucurbita moschata]	[more]

BLAST of MS011378 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS011378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJB4	5.0e-71	91.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1	[more]
A0A5D3CRH4	7.2e-70	89.68	HTH-type transcriptional regulator protein ptxE OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B0H3	7.2e-70	89.68	uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=...	[more]
A0A6J1KPP1	4.0e-68	87.74	uncharacterized protein LOC111497150 OS=Cucurbita maxima OX=3661 GN=LOC111497150...	[more]
A0A6J1HH54	4.0e-68	88.39	uncharacterized protein LOC111463438 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]

BLAST of MS011378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23690.1	2.7e-45	60.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	2.2e-42	59.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	8.8e-36	53.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G50800.1	2.0e-35	53.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G76600.1	9.1e-17	35.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..155 e-value: 2.7E-26 score: 93.1
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..155
None	No IPR available	PANTHER	PTHR33052:SF128	HTH-TYPE TRANSCRIPTIONAL REGULATOR	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011378.1	MS011378.1	mRNA