MS011335 (gene) Bitter gourd (TR) v1

Overview


Name	MS011335
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WRKY protein
Location	scaffold239: 1113394 .. 1114250 (-)
RNA-Seq Expression	MS011335
Synteny	MS011335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGAAGCGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCCAGATTCTGCTTCAAAACCATGAGCGACGTCGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAGAAAGTTGTCAAGAACACCCTCCATCCCAGGTTTCATTCTTTCTTTCACTCATATAATTTAATTAATTGCATGGATCATTATTAATTGGATGGAGGGGGATTTTTAATAACTCACAGATCTTGTTTTATTTTCTCAAAGATTATATCTACACCACTACATAATTATTGCATATTCCTTTGCTACCTCTTCTACACTACTGTACTGTTTCTTTTTCTTTTTTCATTTCCAGAAAAAGAAAAAAGTTTGTAATTTCATCATATAAATATGGCATTACATTTATATAAGTTGTGGGTTTATTCTTGATCACTATTCAAATAGGGTTTGTTTGTGTGTATTGTCCACATCTCTAGCCTTAATTCTAGGGCTTTTTTTCCCCTTCAAACCTAAGCTACCCACAAATCACAATTTGGCTATTTATTTAATATCATATTTAATAGATAGAAGTAGATATCCCATCTATTGATTTTTAATAGAGTTTTGAATACATTGATGACGTATTATTGTAATAAACTCATGGTCGGATTGTGGTGACCTGGTTCAATAATTTTTGCATGTGCAGGAGCTACTACCGGTGCACAGAAGATAAGTGTAGGGTGAAGAAGAGGGTCGAGAGATTAGCGGAAGATCCGAGAATGGTGATAACGACCTACGAAGGACGACATGCCCATTCACCATCACGTGATAATTTGGAAGAGACGATGGGGCAGCTACCATCGGGCCACCTCAGCAATTTCTTCTGG

mRNA sequence

ATGAAGATGAAGCGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCCAGATTCTGCTTCAAAACCATGAGCGACGTCGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAGAAAGTTGTCAAGAACACCCTCCATCCCAGGAGCTACTACCGGTGCACAGAAGATAAGTGTAGGGTGAAGAAGAGGGTCGAGAGATTAGCGGAAGATCCGAGAATGGTGATAACGACCTACGAAGGACGACATGCCCATTCACCATCACGTGATAATTTGGAAGAGACGATGGGGCAGCTACCATCGGGCCACCTCAGCAATTTCTTCTGG

Coding sequence (CDS)

ATGAAGATGAAGCGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCCAGATTCTGCTTCAAAACCATGAGCGACGTCGACGTTCTTGACGACGGTTACAAATGGAGAAAGTACGGCCAGAAAGTTGTCAAGAACACCCTCCATCCCAGGAGCTACTACCGGTGCACAGAAGATAAGTGTAGGGTGAAGAAGAGGGTCGAGAGATTAGCGGAAGATCCGAGAATGGTGATAACGACCTACGAAGGACGACATGCCCATTCACCATCACGTGATAATTTGGAAGAGACGATGGGGCAGCTACCATCGGGCCACCTCAGCAATTTCTTCTGG

Protein sequence

MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSNFFW

Homology

[Close]

BLAST of MS011335 vs. NCBI nr
Match: XP_022133061.1 (probable WRKY transcription factor 24 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 7.8e-57
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR
Sbjct: 115 MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 174

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSNFFW 110
           VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSN FW
Sbjct: 175 VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSNIFW 223

[Close]

BLAST of MS011335 vs. NCBI nr
Match: NP_001362711.1 (probable WRKY transcription factor 13-like [Cucumis sativus] >KGN48415.1 hypothetical protein Csa_002921 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 135 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 194

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEET-MGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE++ MG LPS HL+NFF
Sbjct: 195 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDSFMGHLPSSHLTNFF 243

[Close]

BLAST of MS011335 vs. NCBI nr
Match: ADU52523.1 (WRKY protein [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 53  MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 112

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEET-MGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE++ MG LPS HL+NFF
Sbjct: 113 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDSFMGHLPSSHLTNFF 161

[Close]

BLAST of MS011335 vs. NCBI nr
Match: XP_016899208.1 (PREDICTED: probable WRKY transcription factor 12 isoform X1 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 94/109 (86.24%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 138 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 197

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEE-TMGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE+  MG LPS HL++FF
Sbjct: 198 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDPIMGHLPSSHLTSFF 246

[Close]

BLAST of MS011335 vs. NCBI nr
Match: XP_008440122.1 (PREDICTED: probable WRKY transcription factor 12 isoform X2 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 94/109 (86.24%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 128 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 187

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEE-TMGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE+  MG LPS HL++FF
Sbjct: 188 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDPIMGHLPSSHLTSFF 236

[Close]

BLAST of MS011335 vs. ExPASy Swiss-Prot
Match: Q9SVB7 (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-43
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           +KMK++K R+KVREPRFCFKT+S+VDVLDDGY+WRKYGQKVVKNT HPRSYYRCT+DKCR
Sbjct: 195 LKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCR 254

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGH----LSNFFW 110
           VKKRVERLA+DPRMVITTYEGRH HSPS ++L++    L + H    LSNFFW
Sbjct: 255 VKKRVERLADDPRMVITTYEGRHLHSPS-NHLDD--DSLSTSHLHPPLSNFFW 304

[Close]

BLAST of MS011335 vs. ExPASy Swiss-Prot
Match: Q93WY4 (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-36
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 5   RIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKR 64
           ++K R+K+REPRFCF+T SDVDVLDDGYKWRKYGQKVVKN+LHPRSYYRCT + CRVKKR
Sbjct: 121 KVKIRRKLREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKR 180

Query: 65  VERLAEDPRMVITTYEGRHAHSPSRDN 92
           VERL+ED RMVITTYEGRH H PS D+
Sbjct: 181 VERLSEDCRMVITTYEGRHNHIPSDDS 207

[Close]

BLAST of MS011335 vs. ExPASy Swiss-Prot
Match: Q9C983 (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-27
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 7   KGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKRVE 66
           K +K++R+PRF F T SDVD L+DGY+WRKYGQK VKN+  PRSYYRCT  +C VKKRVE
Sbjct: 125 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVE 184

Query: 67  RLAEDPRMVITTYEGRHAH 86
           R ++DP +VITTYEG+H H
Sbjct: 185 RSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of MS011335 vs. ExPASy Swiss-Prot
Match: Q93WV4 (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 2   KMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRV 61
           K  + KG KK RE R  F T S++D L+DGY+WRKYGQK VKN+ +PRSYYRCT  KC V
Sbjct: 109 KQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNV 168

Query: 62  KKRVERLAEDPRMVITTYEGRHAH 86
           KKRVER  +DP +VITTYEG+H H
Sbjct: 169 KKRVERSFQDPSIVITTYEGKHNH 192

[Close]

BLAST of MS011335 vs. ExPASy Swiss-Prot
Match: Q8VWJ2 (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-25
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 10  KKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKRVERLA 69
           KK REPR  F T S+VD L+DGY+WRKYGQK VKN+ +PRSYYRCT  KC VKKRVER  
Sbjct: 153 KKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSF 212

Query: 70  EDPRMVITTYEGRHAH 86
           +DP +VITTYEG+H H
Sbjct: 213 QDPTVVITTYEGQHNH 228

[Close]

BLAST of MS011335 vs. ExPASy TrEMBL
Match: A0A6J1BTZ1 (probable WRKY transcription factor 24 OS=Momordica charantia OX=3673 GN=LOC111005748 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.8e-57
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR
Sbjct: 115 MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 174

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSNFFW 110
           VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSN FW
Sbjct: 175 VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGHLSNIFW 223

[Close]

BLAST of MS011335 vs. ExPASy TrEMBL
Match: A0A0A0KFC7 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486880 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 135 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 194

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEET-MGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE++ MG LPS HL+NFF
Sbjct: 195 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDSFMGHLPSSHLTNFF 243

[Close]

BLAST of MS011335 vs. ExPASy TrEMBL
Match: E7CEY0 (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY43 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 53  MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 112

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEET-MGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE++ MG LPS HL+NFF
Sbjct: 113 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDSFMGHLPSSHLTNFF 161

[Close]

BLAST of MS011335 vs. ExPASy TrEMBL
Match: A0A1S4DTC3 (probable WRKY transcription factor 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484680 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 94/109 (86.24%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 138 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 197

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEE-TMGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE+  MG LPS HL++FF
Sbjct: 198 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDPIMGHLPSSHLTSFF 246

[Close]

BLAST of MS011335 vs. ExPASy TrEMBL
Match: A0A1S3B0E1 (probable WRKY transcription factor 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484680 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 94/109 (86.24%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           MKMKRIKGRKKVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTE+ C+
Sbjct: 128 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCK 187

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEE-TMGQLPSGHLSNFF 109
           VKKRVERLA+DPRMVITTYEGRHAHSPS  NLE+  MG LPS HL++FF
Sbjct: 188 VKKRVERLADDPRMVITTYEGRHAHSPSDHNLEDPIMGHLPSSHLTSFF 236

[Close]

BLAST of MS011335 vs. TAIR 10
Match: AT4G39410.1 (WRKY DNA-binding protein 13 )

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-44
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MKMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCR 60
           +KMK++K R+KVREPRFCFKT+S+VDVLDDGY+WRKYGQKVVKNT HPRSYYRCT+DKCR
Sbjct: 195 LKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCR 254

Query: 61  VKKRVERLAEDPRMVITTYEGRHAHSPSRDNLEETMGQLPSGH----LSNFFW 110
           VKKRVERLA+DPRMVITTYEGRH HSPS ++L++    L + H    LSNFFW
Sbjct: 255 VKKRVERLADDPRMVITTYEGRHLHSPS-NHLDD--DSLSTSHLHPPLSNFFW 304

[Close]

BLAST of MS011335 vs. TAIR 10
Match: AT2G44745.1 (WRKY family transcription factor )

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 5   RIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKR 64
           ++K R+K+REPRFCF+T SDVDVLDDGYKWRKYGQKVVKN+LHPRSYYRCT + CRVKKR
Sbjct: 121 KVKIRRKLREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKR 180

Query: 65  VERLAEDPRMVITTYEGRHAHSPSRDN 92
           VERL+ED RMVITTYEGRH H PS D+
Sbjct: 181 VERLSEDCRMVITTYEGRHNHIPSDDS 207

[Close]

BLAST of MS011335 vs. TAIR 10
Match: AT1G69310.1 (WRKY DNA-binding protein 57 )

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-28
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 7   KGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKRVE 66
           K +K++R+PRF F T SDVD L+DGY+WRKYGQK VKN+  PRSYYRCT  +C VKKRVE
Sbjct: 125 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVE 184

Query: 67  RLAEDPRMVITTYEGRHAH 86
           R ++DP +VITTYEG+H H
Sbjct: 185 RSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of MS011335 vs. TAIR 10
Match: AT1G69310.2 (WRKY DNA-binding protein 57 )

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-28
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 7   KGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRVKKRVE 66
           K +K++R+PRF F T SDVD L+DGY+WRKYGQK VKN+  PRSYYRCT  +C VKKRVE
Sbjct: 125 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVE 184

Query: 67  RLAEDPRMVITTYEGRHAH 86
           R ++DP +VITTYEG+H H
Sbjct: 185 RSSDDPSIVITTYEGQHCH 203

[Close]

BLAST of MS011335 vs. TAIR 10
Match: AT1G29860.1 (WRKY DNA-binding protein 71 )

HSP 1 Score: 117.1 bits (292), Expect = 8.9e-27
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 2   KMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTEDKCRV 61
           K  + KG KK RE R  F T S++D L+DGY+WRKYGQK VKN+ +PRSYYRCT  KC V
Sbjct: 109 KQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNV 168

Query: 62  KKRVERLAEDPRMVITTYEGRHAH 86
           KKRVER  +DP +VITTYEG+H H
Sbjct: 169 KKRVERSFQDPSIVITTYEGKHNH 192

The following BLAST results are available for this feature:

BLAST of MS011335 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133061.1	7.8e-57	99.08	probable WRKY transcription factor 24 [Momordica charantia]	[more]
NP_001362711.1	1.5e-47	87.16	probable WRKY transcription factor 13-like [Cucumis sativus] >KGN48415.1 hypothe...	[more]
ADU52523.1	1.5e-47	87.16	WRKY protein [Cucumis sativus]	[more]
XP_016899208.1	9.5e-47	86.24	PREDICTED: probable WRKY transcription factor 12 isoform X1 [Cucumis melo]	[more]
XP_008440122.1	9.5e-47	86.24	PREDICTED: probable WRKY transcription factor 12 isoform X2 [Cucumis melo]	[more]

BLAST of MS011335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVB7	2.3e-43	75.22	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 ...	[more]
Q93WY4	1.6e-36	80.46	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 ...	[more]
Q9C983	3.0e-27	67.09	Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 ...	[more]
Q93WV4	1.3e-25	64.29	WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1	[more]
Q8VWJ2	1.6e-25	69.74	WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1	[more]

BLAST of MS011335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BTZ1	3.8e-57	99.08	probable WRKY transcription factor 24 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A0A0KFC7	7.1e-48	87.16	WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486880 PE=4 S...	[more]
E7CEY0	7.1e-48	87.16	WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY43 PE=2 SV=1	[more]
A0A1S4DTC3	4.6e-47	86.24	probable WRKY transcription factor 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3B0E1	4.6e-47	86.24	probable WRKY transcription factor 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of MS011335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39410.1	1.6e-44	75.22	WRKY DNA-binding protein 13	[more]
AT2G44745.1	1.1e-37	80.46	WRKY family transcription factor	[more]
AT1G69310.1	2.1e-28	67.09	WRKY DNA-binding protein 57	[more]
AT1G69310.2	2.1e-28	67.09	WRKY DNA-binding protein 57	[more]
AT1G29860.1	8.9e-27	64.29	WRKY DNA-binding protein 71	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 28..87 e-value: 1.3E-36 score: 137.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 29..85 e-value: 3.2E-25 score: 88.1
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 23..88 score: 29.126259
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 14..88 e-value: 2.1E-32 score: 112.7
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 20..87
None	No IPR available	PANTHER	PTHR31221:SF17	WRKY TRANSCRIPTION FACTOR 13-RELATED	coord: 1..94
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011335.1	MS011335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding