MS011245 (gene) Bitter gourd (TR) v1

Overview


Name	MS011245
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	scaffold239: 355427 .. 356056 (-)
RNA-Seq Expression	MS011245
Synteny	MS011245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGGAATGCGCTCACCACAGCAAGAAACGGTCAAAGCTAACCCGGCGAATCTACGCCGGAATTCTCATCTTCCTCTTCCTCGTCCTCCTCACGATCCTCCTAGTTTGGGCGATTCTGCAGCCGACGAAGCCCAAATTCATCATCCAGGACGCCACCGTGTACGTCTTCAACGTCACCGGCGCCAATTTCTTGTCCTCCAGCATCCAGGTCACCGTCTCCGCCCACAACCCTAACGACAAGATCGGAATCTACTACGACCGCCTCGACGTCTTCGCTGTCTACCGGAACCAGCAGATCACTCTCCGTACCGTCATCCAGCCGACCTACCAAGGCCACAACGACGTCAACGTCTGGTCTCCGTTCGTCGTCGGAAACGCCGTTCCGATCGCTCCCTACAACGGCGCCGCTCTATACCAAGACCAGGCCGTCGGCACCGTCCTCCTCTCCATCAAACTCGACGGCCGCGTCCGATTCAAAGTCGGAGCGTTCGTCTCCGGCCGATACCATCTCAACGTCGACTGTCCGGCCACTATTTCGTTCGGAAATCCCGCCGCCGGCAACGGCATCATCGTCGGCAATAACGCCGTTAAGTACCAGCTGGTACAGCCGTGCAGCGTTAGTGTA

mRNA sequence

ATGTCAAAGGAATGCGCTCACCACAGCAAGAAACGGTCAAAGCTAACCCGGCGAATCTACGCCGGAATTCTCATCTTCCTCTTCCTCGTCCTCCTCACGATCCTCCTAGTTTGGGCGATTCTGCAGCCGACGAAGCCCAAATTCATCATCCAGGACGCCACCGTGTACGTCTTCAACGTCACCGGCGCCAATTTCTTGTCCTCCAGCATCCAGGTCACCGTCTCCGCCCACAACCCTAACGACAAGATCGGAATCTACTACGACCGCCTCGACGTCTTCGCTGTCTACCGGAACCAGCAGATCACTCTCCGTACCGTCATCCAGCCGACCTACCAAGGCCACAACGACGTCAACGTCTGGTCTCCGTTCGTCGTCGGAAACGCCGTTCCGATCGCTCCCTACAACGGCGCCGCTCTATACCAAGACCAGGCCGTCGGCACCGTCCTCCTCTCCATCAAACTCGACGGCCGCGTCCGATTCAAAGTCGGAGCGTTCGTCTCCGGCCGATACCATCTCAACGTCGACTGTCCGGCCACTATTTCGTTCGGAAATCCCGCCGCCGGCAACGGCATCATCGTCGGCAATAACGCCGTTAAGTACCAGCTGGTACAGCCGTGCAGCGTTAGTGTA

Coding sequence (CDS)

ATGTCAAAGGAATGCGCTCACCACAGCAAGAAACGGTCAAAGCTAACCCGGCGAATCTACGCCGGAATTCTCATCTTCCTCTTCCTCGTCCTCCTCACGATCCTCCTAGTTTGGGCGATTCTGCAGCCGACGAAGCCCAAATTCATCATCCAGGACGCCACCGTGTACGTCTTCAACGTCACCGGCGCCAATTTCTTGTCCTCCAGCATCCAGGTCACCGTCTCCGCCCACAACCCTAACGACAAGATCGGAATCTACTACGACCGCCTCGACGTCTTCGCTGTCTACCGGAACCAGCAGATCACTCTCCGTACCGTCATCCAGCCGACCTACCAAGGCCACAACGACGTCAACGTCTGGTCTCCGTTCGTCGTCGGAAACGCCGTTCCGATCGCTCCCTACAACGGCGCCGCTCTATACCAAGACCAGGCCGTCGGCACCGTCCTCCTCTCCATCAAACTCGACGGCCGCGTCCGATTCAAAGTCGGAGCGTTCGTCTCCGGCCGATACCATCTCAACGTCGACTGTCCGGCCACTATTTCGTTCGGAAATCCCGCCGCCGGCAACGGCATCATCGTCGGCAATAACGCCGTTAAGTACCAGCTGGTACAGCCGTGCAGCGTTAGTGTA

Protein sequence

MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNVTGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVWSPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATISFGNPAAGNGIIVGNNAVKYQLVQPCSVSV

Homology

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BLAST of MS011245 vs. NCBI nr
Match: XP_022133133.1 (NDR1/HIN1-like protein 1 [Momordica charantia])

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV
Sbjct: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW
Sbjct: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPIAPYNGAALYQDQAVGT+LLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI
Sbjct: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTLLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV
Sbjct: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 210

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BLAST of MS011245 vs. NCBI nr
Match: XP_023545105.1 (NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 7.1e-99
Identity = 182/210 (86.67%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           M KECAHHSKKR KL RRIYAG+LIFLFLVLLTILL+WAILQPTKPKFIIQDATV++FNV
Sbjct: 1   MVKECAHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           T ANF+SSSIQVT+S+ NPNDKIGIYYDRLDV+AVYRNQQITLRTVIQP YQGHND+N+W
Sbjct: 61  TAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPI+PYNGAAL QDQAVGTVLLSIK+DGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  GIIVGNN VKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GIIVGNNVVKYQLVRPCSVSV 208

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BLAST of MS011245 vs. NCBI nr
Match: XP_022978373.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 181/210 (86.19%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           M KECAHHSKKR KL R+IYAG+LIFLFLVLLTILL+WAILQPTKPKFIIQDATV++FNV
Sbjct: 1   MVKECAHHSKKRPKLIRKIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           T ANF+SSSIQVT+S+ NPNDKIGIYYDRLDV+AVYRNQQITLRTVIQP YQGHND+N+W
Sbjct: 61  TAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPI+PYNGAAL QDQAVGTVLLSIK+DGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  GIIVGNN VKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GIIVGNNVVKYQLVRPCSVSV 208

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BLAST of MS011245 vs. NCBI nr
Match: XP_038881034.1 (NDR1/HIN1-like protein 1 [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 183/210 (87.14%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           MSKEC HHSKKR KL RRIYAGILIFLFLVLLTILL+WAILQPTKPKFIIQDATV++FNV
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           T ANF+SSSIQVTVS+ NPNDKIG+YYDRLDV+AVYRNQQITLRTVIQPTYQGHND+N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPF+VGN VPI+PYNGAAL QDQAVGTV LSIKLDGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFLVGNDVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  GIIVGNNAVKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GIIVGNNAVKYQLVRPCSVSV 208

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BLAST of MS011245 vs. NCBI nr
Match: XP_022926048.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata] >KAG6604318.1 NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034470.1 NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 181/210 (86.19%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           M KECAHHSKKR KL RRIYAG+LIFLFLVLLTILL+WAILQPTKPKFIIQDATV++FNV
Sbjct: 1   MVKECAHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           + ANF+SSSIQVT+S+ NPNDKIGIYYDRLDV+AVYRNQQITLRTVIQP YQGHND+N+W
Sbjct: 61  SAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPI+PYNGAAL QDQAVGTVLLSIK+DGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  GIIVGNN VKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GIIVGNNVVKYQLVRPCSVSV 208

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BLAST of MS011245 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.8e-71
Identity = 131/210 (62.38%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 3   KECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNVTG 62
           K+C +H   R KL RRI+  I+  LF++ LTILL+WAILQP+KP+FI+QDATVY FNV+G
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 63  --ANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 122
              N L+S+ Q+T+S+ NPN+KIGIYYDRLDV+A YR+QQIT  T I PTYQGH DV++W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 123 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 182
           SPFV G +VPIAP+NG +L  D+  G VLL I+ DGRVR+KVG F++G+YHL+V CPA I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 183 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           +FGN A  NG+IVG+NAVKY     CSVSV
Sbjct: 182 NFGNKA--NGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of MS011245 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-61
Identity = 118/210 (56.19%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 2   SKECAHHSKKRSKLTRRIYAGILI-FLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 61
           +K+C +H       T     G++I F+ +VL+TI LVW ILQPTKP+FI+QDATVY FN+
Sbjct: 3   TKDCGNHGGGGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL 62

Query: 62  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 121
           +  N L+S+ Q+T+++ N N +IGIYYDRL V+A YRNQQITLRT I PTYQGH + NVW
Sbjct: 63  SQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVW 122

Query: 122 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 181
           SPFV GN+VPIAP+N  AL  +Q  G V L I+ DGRVR+KVG  ++G+YHL+V C A I
Sbjct: 123 SPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

Query: 182 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           +  + AA  G+ VG NAVKY L+  CSV+V
Sbjct: 183 NLADKAA--GVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of MS011245 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-33
Identity = 66/169 (39.05%), Postives = 112/169 (66.27%), Query Frame = 0


Query: 17  RRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNVT--GANFLSSSIQVTV 76
           ++++     F   +LL I LVW IL P +P+F + +A +Y  N+T    + L+SS+Q+T+
Sbjct: 25  KKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTL 84

Query: 77  SAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVWSPFVVGNAVPIAPY 136
            + NPN K+GIYYD+L V+A YR QQIT    + P YQ H ++N+ + F+ G  +P+A  
Sbjct: 85  FSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQS 144

Query: 137 NGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATISFG 184
            G  + ++++ G +++ +K+DG++R+K+G +VSG Y  NV+C A ++FG
Sbjct: 145 FGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFG 193

[Close]

BLAST of MS011245 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 19  IYAGILIFLFLVL-LTILLVWAILQPTKPKFIIQDATVYVFNVTGA-NFLSSSIQVTVSA 78
           ++  ++I L ++L +  L+ W I++P   KF + DA++  F+ T   N L  ++ +TV  
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 79  HNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVWSPFVVG-NAVPIAPYN 138
            NPN +IG+YYDR++  A Y  ++ +  T + P YQGH +  V +P   G N V      
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ 159

Query: 139 GAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDC 177
              L  ++  G   + IK   RVRFK+G     R    VDC
Sbjct: 160 SRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of MS011245 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 47/163 (28.83%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 23  ILIFLFLVLLTI--------LLVWAILQPTKPKFIIQDATVYVFNVTGANFLSSSIQVTV 82
           IL  +F +L+TI        L++W I +P   KF + DA +  F +   N L  ++ +  
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 83  SAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVWSPFVVGNAVPIAPY 142
           +  NPN +IG+YYD ++V   Y +Q+  +   I   YQGH +  V    +VG  + +   
Sbjct: 104 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDG 163

Query: 143 NGAA-LYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDC 177
                L +D       +  KL  ++RFK G   S R+   + C
Sbjct: 164 GERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC 206

[Close]

BLAST of MS011245 vs. ExPASy TrEMBL
Match: A0A6J1BY75 (NDR1/HIN1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111005806 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.1e-113
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV
Sbjct: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW
Sbjct: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPIAPYNGAALYQDQAVGT+LLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI
Sbjct: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTLLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV
Sbjct: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 210

[Close]

BLAST of MS011245 vs. ExPASy TrEMBL
Match: A0A6J1ISX4 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478384 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.7e-99
Identity = 181/210 (86.19%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           M KECAHHSKKR KL R+IYAG+LIFLFLVLLTILL+WAILQPTKPKFIIQDATV++FNV
Sbjct: 1   MVKECAHHSKKRPKLIRKIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           T ANF+SSSIQVT+S+ NPNDKIGIYYDRLDV+AVYRNQQITLRTVIQP YQGHND+N+W
Sbjct: 61  TAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPI+PYNGAAL QDQAVGTVLLSIK+DGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  GIIVGNN VKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GIIVGNNVVKYQLVRPCSVSV 208

[Close]

BLAST of MS011245 vs. ExPASy TrEMBL
Match: A0A6J1EGY4 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111433283 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 181/210 (86.19%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           M KECAHHSKKR KL RRIYAG+LIFLFLVLLTILL+WAILQPTKPKFIIQDATV++FNV
Sbjct: 1   MVKECAHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFLFNV 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           + ANF+SSSIQVT+S+ NPNDKIGIYYDRLDV+AVYRNQQITLRTVIQP YQGHND+N+W
Sbjct: 61  SAANFISSSIQVTISSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPNYQGHNDINIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFVVGNAVPI+PYNGAAL QDQAVGTVLLSIK+DGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFVVGNAVPISPYNGAALNQDQAVGTVLLSIKIDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  GIIVGNN VKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GIIVGNNVVKYQLVRPCSVSV 208

[Close]

BLAST of MS011245 vs. ExPASy TrEMBL
Match: A0A5A7SIT9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00660 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 180/210 (85.71%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           MSKEC HHSKKR KL RRIYAGILIFLFLVLLTILL+WAILQPTKPKF+IQDATVY+FN+
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNI 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           T ANF+SSSIQVTVS+ NPNDKIG+YYDRLDV+AVYRNQQITLRT IQPTYQGHND+N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTGIQPTYQGHNDLNIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPF+VGN+VPI+PYNGAAL QDQAVGTV LSIKLDGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFLVGNSVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  G+IVGNNAVKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of MS011245 vs. ExPASy TrEMBL
Match: A0A1S3CIY0 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500933 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 180/210 (85.71%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           MSKEC HHSKKR KL RRIYAGILIFLFLVLLTILL+WAILQPTKPKF+IQDATVY+FN+
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNI 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           T ANF+SSSIQVTVS+ NPNDKIG+YYDRLDV+AVYRNQQITLRT IQPTYQGHND+N+W
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTGIQPTYQGHNDLNIW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPF+VGN+VPI+PYNGAAL QDQAVGTV LSIKLDGRVRFKVG F+SGRYHLNVDCPA I
Sbjct: 121 SPFLVGNSVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
            FGNP A  G+IVGNNAVKYQLV+PCSVSV
Sbjct: 181 MFGNPTA--GVIVGNNAVKYQLVRPCSVSV 208

[Close]

BLAST of MS011245 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 269.2 bits (687), Expect = 2.7e-72
Identity = 131/210 (62.38%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 3   KECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNVTG 62
           K+C +H   R KL RRI+  I+  LF++ LTILL+WAILQP+KP+FI+QDATVY FNV+G
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 63  --ANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 122
              N L+S+ Q+T+S+ NPN+KIGIYYDRLDV+A YR+QQIT  T I PTYQGH DV++W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 123 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 182
           SPFV G +VPIAP+NG +L  D+  G VLL I+ DGRVR+KVG F++G+YHL+V CPA I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 183 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           +FGN A  NG+IVG+NAVKY     CSVSV
Sbjct: 182 NFGNKA--NGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of MS011245 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 249.2 bits (635), Expect = 2.9e-66
Identity = 120/210 (57.14%), Postives = 158/210 (75.24%), Query Frame = 0


Query: 1   MSKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 60
           MSK+C +H   +  + R++ A I+ F+ +VL+TI LVW IL+PTKP+F++QDATVY FN+
Sbjct: 1   MSKDCGNHGGGKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNL 60

Query: 61  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 120
           +  N L+S+ QVT+++ NPN KIGIYYDRL V+A Y NQQITLRT I PTYQGH +VNVW
Sbjct: 61  SQPNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVW 120

Query: 121 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 180
           SPFV G AVPIAPYN  AL +++  G V L I+ DG VR+KV   ++G+YH++V C A I
Sbjct: 121 SPFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFI 180

Query: 181 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           + GN AA  G++VG+NAVKY L   CSV+V
Sbjct: 181 NLGNKAA--GVLVGDNAVKYTLANKCSVNV 208

[Close]

BLAST of MS011245 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 239.2 bits (609), Expect = 3.0e-63
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 0


Query: 3   KECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNVTG 62
           KEC HH  +  K+ +RI A +L FL  VL  + LVWAIL P  P+F++QDAT+Y FNV+ 
Sbjct: 4   KECEHHHDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQ 63

Query: 63  ANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVWSP 122
            N+L+S++QVT+S+ NPNDKIGI+YDRLD++A YRNQQ+TL T++  TYQGH DV +WSP
Sbjct: 64  PNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSP 123

Query: 123 FVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATISF 182
           F+ G  VP+APY   AL QD   G VLL+IK+DG VR+KVG +VSGRY L+V+CPA I+ 
Sbjct: 124 FLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYITL 183

Query: 183 GNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
               +G+G      AVKYQLVQ C+V V
Sbjct: 184 AGHFSGDG-----PAVKYQLVQRCAVDV 206

[Close]

BLAST of MS011245 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 235.7 bits (600), Expect = 3.3e-62
Identity = 118/210 (56.19%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 2   SKECAHHSKKRSKLTRRIYAGILI-FLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNV 61
           +K+C +H       T     G++I F+ +VL+TI LVW ILQPTKP+FI+QDATVY FN+
Sbjct: 3   TKDCGNHGGGGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL 62

Query: 62  TGANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNVW 121
           +  N L+S+ Q+T+++ N N +IGIYYDRL V+A YRNQQITLRT I PTYQGH + NVW
Sbjct: 63  SQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVW 122

Query: 122 SPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPATI 181
           SPFV GN+VPIAP+N  AL  +Q  G V L I+ DGRVR+KVG  ++G+YHL+V C A I
Sbjct: 123 SPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

Query: 182 SFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           +  + AA  G+ VG NAVKY L+  CSV+V
Sbjct: 183 NLADKAA--GVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of MS011245 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 231.5 bits (589), Expect = 6.3e-61
Identity = 120/211 (56.87%), Postives = 156/211 (73.93%), Query Frame = 0


Query: 2   SKECAHHSKKRSKLTRRIYAGILIFLFLVLLTILLVWAILQPTKPKFIIQDATVYVFNVT 61
           SK+C  H    S   + +   I I L L+L+ ILLVWAILQP+KP+F++QDATV+ FNV+
Sbjct: 3   SKDCGSHDSHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVS 62

Query: 62  G--ANFLSSSIQVTVSAHNPNDKIGIYYDRLDVFAVYRNQQITLRTVIQPTYQGHNDVNV 121
           G   N L+S+ Q T+S+ NPNDKIGIYYDRLDV+A YR+QQITL + +  TYQGH +VNV
Sbjct: 63  GNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNV 122

Query: 122 WSPFVVGNAVPIAPYNGAALYQDQAVGTVLLSIKLDGRVRFKVGAFVSGRYHLNVDCPAT 181
           WSPFV G +VP+APYN   L QD + G ++L + LDGRVR+KVG+F++G+YHL+V C A 
Sbjct: 123 WSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHAL 182

Query: 182 ISFGNPAAGNGIIVGNNAVKYQLVQPCSVSV 211
           I+FG+ AA  G+IVG    KY L + CSVSV
Sbjct: 183 INFGSSAA--GVIVG----KYMLTETCSVSV 207

The following BLAST results are available for this feature:

BLAST of MS011245 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133133.1	1.5e-112	99.52	NDR1/HIN1-like protein 1 [Momordica charantia]	[more]
XP_023545105.1	7.1e-99	86.67	NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022978373.1	1.6e-98	86.19	NDR1/HIN1-like protein 1 [Cucurbita maxima]	[more]
XP_038881034.1	1.6e-98	87.14	NDR1/HIN1-like protein 1 [Benincasa hispida]	[more]
XP_022926048.1	2.1e-98	86.19	NDR1/HIN1-like protein 1 [Cucurbita moschata] >KAG6604318.1 NDR1/HIN1-like prote...	[more]

BLAST of MS011245 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	3.8e-71	62.38	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	4.7e-61	56.19	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	2.4e-33	39.05	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	2.5e-14	32.92	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	1.5e-11	28.83	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of MS011245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BY75	7.1e-113	99.52	NDR1/HIN1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111005806 PE=4 SV=...	[more]
A0A6J1ISX4	7.7e-99	86.19	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478384 PE=4 SV=1	[more]
A0A6J1EGY4	1.0e-98	86.19	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111433283 PE=4 SV=1	[more]
A0A5A7SIT9	1.7e-98	85.71	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3CIY0	1.7e-98	85.71	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500933 PE=4 SV=1	[more]

BLAST of MS011245 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11660.1	2.7e-72	62.38	NDR1/HIN1-like 1	[more]
AT3G52470.1	2.9e-66	57.14	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G44220.1	3.0e-63	56.73	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	3.3e-62	56.19	NDR1/HIN1-like 12	[more]
AT5G06330.1	6.3e-61	56.87	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 73..176 e-value: 2.8E-11 score: 43.9
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 8..210
None	No IPR available	PANTHER	PTHR31415:SF107	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	coord: 8..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011245.1	MS011245.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism