MS011000 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGCGATTGCGATTGGCCGGATCAAGAAGACGAAGAAGGGGAGATCCTTCAGCTTCCGGAGGCTAAGAGAGTCGTGGAAGTGGAAATTCCTTCGGGATTTCAAGTGGAAGAGAATGAATCTCCACATTGGTTTCTTGGACGCCATCATCTTCCGAATCGCCTCCCTGTTTGAGGCCATTGCGTTGGTAGGTATCGCCGGCTTCTTCTTCCTCTGTTGTGGCTGCCACTTC ATGGATGATGCGATTGCGATTGGCCGGATCAAGAAGACGAAGAAGGGGAGATCCTTCAGCTTCCGGAGGCTAAGAGAGTCGTGGAAGTGGAAATTCCTTCGGGATTTCAAGTGGAAGAGAATGAATCTCCACATTGGTTTCTTGGACGCCATCATCTTCCGAATCGCCTCCCTGTTTGAGGCCATTGCGTTGGTAGGTATCGCCGGCTTCTTCTTCCTCTGTTGTGGCTGCCACTTC ATGGATGATGCGATTGCGATTGGCCGGATCAAGAAGACGAAGAAGGGGAGATCCTTCAGCTTCCGGAGGCTAAGAGAGTCGTGGAAGTGGAAATTCCTTCGGGATTTCAAGTGGAAGAGAATGAATCTCCACATTGGTTTCTTGGACGCCATCATCTTCCGAATCGCCTCCCTGTTTGAGGCCATTGCGTTGGTAGGTATCGCCGGCTTCTTCTTCCTCTGTTGTGGCTGCCACTTC MDDAIAIGRIKKTKKGRSFSFRRLRESWKWKFLRDFKWKRMNLHIGFLDAIIFRIASLFEAIALVGIAGFFFLCCGCHF Homology
BLAST of MS011000 vs. NCBI nr
Match: KAG7034699.1 (hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124.8 bits (312), Expect = 3.3e-25 Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of MS011000 vs. NCBI nr
Match: KAG6581417.1 (hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of MS011000 vs. NCBI nr
Match: KGN49382.1 (hypothetical protein Csa_004198 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20 Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 0
BLAST of MS011000 vs. NCBI nr
Match: XP_023929751.1 (uncharacterized protein LOC112041078 [Quercus suber]) HSP 1 Score: 83.2 bits (204), Expect = 1.1e-12 Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of MS011000 vs. NCBI nr
Match: XP_035544743.1 (uncharacterized protein LOC108990492 [Juglans regia]) HSP 1 Score: 79.7 bits (195), Expect = 1.2e-11 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of MS011000 vs. ExPASy TrEMBL
Match: A0A0A0KLX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.4e-21 Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = 0
BLAST of MS011000 vs. ExPASy TrEMBL
Match: A0A6P9EL64 (uncharacterized protein LOC108990492 OS=Juglans regia OX=51240 GN=LOC108990492 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
BLAST of MS011000 vs. ExPASy TrEMBL
Match: A0A7N2LSF8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of MS011000 vs. ExPASy TrEMBL
Match: A0A6J1B6L1 (uncharacterized protein LOC110424571 OS=Herrania umbratica OX=108875 GN=LOC110424571 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.6e-11 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS011000 vs. ExPASy TrEMBL
Match: A0A061GEB5 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029517 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.6e-11 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS011000 vs. TAIR 10
Match: AT5G46295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 4.0e-08 Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|