MS010836 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCACTCCATGGCCATTCCCACTTTTCTCATCGCCCTCCTCCTCCTCTCGCCGGCCTACTCTCTCGCCGCCGCCTCTCGGAAGGACGGCGGCTTCGACGGGGTCTTCGGACCCGGTGGCGGCGGGTTCGGCGACATACCCGGATTCGGAAAGGGCTGGGACAGGGGCATCGTCGGCGGGGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGGTACGGGAAGGGCGGCATCATAAGGAACTCCGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTCACGTGTCCGGCCAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGCGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTACTGC ATGATTCACTCCATGGCCATTCCCACTTTTCTCATCGCCCTCCTCCTCCTCTCGCCGGCCTACTCTCTCGCCGCCGCCTCTCGGAAGGACGGCGGCTTCGACGGGGTCTTCGGACCCGGTGGCGGCGGGTTCGGCGACATACCCGGATTCGGAAAGGGCTGGGACAGGGGCATCGTCGGCGGGGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGGTACGGGAAGGGCGGCATCATAAGGAACTCCGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTCACGTGTCCGGCCAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGCGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTACTGC ATGATTCACTCCATGGCCATTCCCACTTTTCTCATCGCCCTCCTCCTCCTCTCGCCGGCCTACTCTCTCGCCGCCGCCTCTCGGAAGGACGGCGGCTTCGACGGGGTCTTCGGACCCGGTGGCGGCGGGTTCGGCGACATACCCGGATTCGGAAAGGGCTGGGACAGGGGCATCGTCGGCGGGGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGGTACGGGAAGGGCGGCATCATAAGGAACTCCGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTCACGTGTCCGGCCAAGTGCTTCTCCTCCTACAGCCGATCGGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGCGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTACTGC MIHSMAIPTFLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC Homology
BLAST of MS010836 vs. NCBI nr
Match: XP_004134728.1 (ctenidin-3 [Cucumis sativus] >KGN49190.1 hypothetical protein Csa_003176 [Cucumis sativus]) HSP 1 Score: 228.0 bits (580), Expect = 4.8e-56 Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of MS010836 vs. NCBI nr
Match: XP_022926656.1 (neuropeptide-like protein 31 [Cucurbita moschata] >KAG6594623.1 hypothetical protein SDJN03_11176, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026592.1 hypothetical protein SDJN02_10594, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.8 bits (569), Expect = 9.0e-55 Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of MS010836 vs. NCBI nr
Match: XP_023517828.1 (cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53 Identity = 112/136 (82.35%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of MS010836 vs. NCBI nr
Match: XP_008439905.1 (PREDICTED: ctenidin-3-like [Cucumis melo] >KAA0052719.1 ctenidin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 218.0 bits (554), Expect = 5.0e-53 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of MS010836 vs. NCBI nr
Match: TYK13106.1 (ctenidin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 218.0 bits (554), Expect = 5.0e-53 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of MS010836 vs. ExPASy TrEMBL
Match: A0A0A0KHJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516980 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.3e-56 Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of MS010836 vs. ExPASy TrEMBL
Match: A0A6J1EFI3 (neuropeptide-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111433724 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.4e-55 Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of MS010836 vs. ExPASy TrEMBL
Match: A0A5D3CRS6 (Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007150 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of MS010836 vs. ExPASy TrEMBL
Match: A0A5A7UGS4 (Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003320 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of MS010836 vs. ExPASy TrEMBL
Match: A0A1S3AZW7 (ctenidin-3-like OS=Cucumis melo OX=3656 GN=LOC103484551 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53 Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 0
BLAST of MS010836 vs. TAIR 10
Match: AT4G21620.1 (glycine-rich protein ) HSP 1 Score: 147.9 bits (372), Expect = 5.9e-36 Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0
BLAST of MS010836 vs. TAIR 10
Match: AT4G21620.2 (glycine-rich protein ) HSP 1 Score: 114.8 bits (286), Expect = 5.5e-26 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of MS010836 vs. TAIR 10
Match: AT1G61255.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18 Identity = 56/97 (57.73%), Postives = 63/97 (64.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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