Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGACAGCCGTGTACGGTGGTCCGATCTCCCTCCCGAGCTTTGGCCACCTCGAAACCTACATCGACATAGTCTGGCGCGCTTCTATTCCTCCTTTCAACGCCATTTCCCCTCTTTTACCTCTCGACCTCCCTTCTCCGGTCTTCTGAACGACACTGACACATTACTTATCCGACGGATAATCTATCGCCTCAGTCCTCTCGATCGCCATGAAACTTCAAACTCTGCTGCTTCTTCTTCTTCTGGCGCGGCGGCGGAGGGCAGCTGGTTGGCGAAGGTGGAGAGTACAAAGCTAGGTAAAATGCGTTATCTGCATCCACTTTCTACTTGCTATGCATACAACAACAATATGTTTTGGAAAGAAGTG
mRNA sequence
ATGGACGACAGCCGTGTACGGTGGTCCGATCTCCCTCCCGAGCTTTGGCCACTCGAAACCTACATCGACATAGTCTGGCGCGCTTCTATTCCTCCTTTCAACGCCATTTCCCCTCTTTTACCTCTCGACCTCCCTTCTCCGGTCTTCAACGACACTGACACATTACTTATCCGACGGATAATCTATCGCCTCAGTCCTCTCGATCGCCATGAAACTTCAAACTCTGCTGCTTCTTCTTCTTCTGGCGCGGCGGCGGAGGGCAGCTGGTTGGCGAAGGTGGAGAGTACAAAGCTAGGTAAAATGCGTTATCTGCATCCACTTTCTACTTGCTATGCATACAACAACAATATGTTTTGGAAAGAAGTG
Coding sequence (CDS)
ATGGACGACAGCCGTGTACGGTGGTCCGATCTCCCTCCCGAGCTTTGGCCACTCGAAACCTACATCGACATAGTCTGGCGCGCTTCTATTCCTCCTTTCAACGCCATTTCCCCTCTTTTACCTCTCGACCTCCCTTCTCCGGTCTTCAACGACACTGACACATTACTTATCCGACGGATAATCTATCGCCTCAGTCCTCTCGATCGCCATGAAACTTCAAACTCTGCTGCTTCTTCTTCTTCTGGCGCGGCGGCGGAGGGCAGCTGGTTGGCGAAGGTGGAGAGTACAAAGCTAGGTAAAATGCGTTATCTGCATCCACTTTCTACTTGCTATGCATACAACAACAATATGTTTTGGAAAGAAGTG
Protein sequence
MDDSRVRWSDLPPELWPLETYIDIVWRASIPPFNAISPLLPLDLPSPVFNDTDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGSWLAKVESTKLGKMRYLHPLSTCYAYNNNMFWKEV
Homology
BLAST of MS010649 vs. NCBI nr
Match:
XP_016899202.1 (PREDICTED: putative F-box protein At1g65770 [Cucumis melo] >KAA0025628.1 putative F-box protein [Cucumis melo var. makuwa] >TYK12503.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 97/145 (66.90%), Postives = 111/145 (76.55%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
M+DSRVRWSDLPPELWP L+TYID++ WRAS+PPFNA+SPLLPLDLPSP
Sbjct: 1 MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60
Query: 61 VF---NDTDTLLIRRIIYRLSPLDRHET------SNSAASSSSGAAAEGSWLAKVESTKL 120
VF + TD LIRRIIYRLSPLD H+T S S++SSSS AAEG WLAKVESTKL
Sbjct: 61 VFAADHLTDAFLIRRIIYRLSPLDHHKTFSFASSSTSSSSSSSYCAAEG-WLAKVESTKL 120
Query: 121 GKMRYLHPLSTCYA-YNNNMFWKEV 123
GKMR+LHPLST YA N+++F KEV
Sbjct: 121 GKMRFLHPLSTRYAKCNSDLFRKEV 144
BLAST of MS010649 vs. NCBI nr
Match:
XP_038881861.1 (putative F-box protein At1g65770 [Benincasa hispida])
HSP 1 Score: 169.1 bits (427), Expect = 2.4e-38
Identity = 99/150 (66.00%), Postives = 111/150 (74.00%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
M+DSRVRWSDLPPELWP L+T+IDI+ WRAS+PPFNAISPLLPLDLPSP
Sbjct: 1 MEDSRVRWSDLPPELWPIIGKRLDTHIDILRFRSVCRSWRASLPPFNAISPLLPLDLPSP 60
Query: 61 VF---NDTDTLLIRRIIYRLSPLDRHETSNSAASSSSGA-----------AAEGSWLAKV 120
VF + TD LIRRIIYRLSPL +TS+SA+SSSS + AAEG WLAKV
Sbjct: 61 VFAADHLTDAFLIRRIIYRLSPLHHRQTSDSASSSSSSSSSSSSSSSSSCAAEG-WLAKV 120
Query: 121 ESTKLGKMRYLHPLSTCYA-YNNNMFWKEV 123
ESTKLGKMR+LHPLST YA YNN +F KEV
Sbjct: 121 ESTKLGKMRFLHPLSTRYAKYNNELFRKEV 149
BLAST of MS010649 vs. NCBI nr
Match:
XP_004134837.2 (putative F-box protein At1g65770 [Cucumis sativus] >KGN48969.1 hypothetical protein Csa_003175 [Cucumis sativus])
HSP 1 Score: 164.1 bits (414), Expect = 7.7e-37
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
M+DSRVRWSDLPPELWP L+TYID++ WRAS+PPFNA+SPLLPLDLPSP
Sbjct: 1 MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60
Query: 61 VF---NDTDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGS--------WLAKVEST 120
VF + TD LIRRIIYRLSPLD H+T + A+SSSS +++ S WLAKVEST
Sbjct: 61 VFAADHLTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKVEST 120
Query: 121 KLGKMRYLHPLSTCYA-YNNNMFWKEV 123
KLGKMR+LHPLST YA N+++ KEV
Sbjct: 121 KLGKMRFLHPLSTRYAKCNSDLLRKEV 147
BLAST of MS010649 vs. NCBI nr
Match:
XP_023518907.1 (putative F-box protein At1g65770 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 157.5 bits (397), Expect = 7.2e-35
Identity = 90/139 (64.75%), Postives = 104/139 (74.82%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
MDDSRV+WSDLPPE+ P LETYID++ WRAS+PPFN +S LLPLDLPSP
Sbjct: 1 MDDSRVQWSDLPPEILPIIGKSLETYIDVLRFRSVCRSWRASLPPFNVVSSLLPLDLPSP 60
Query: 61 VFND---TDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGSWLAKVESTKLGKMRYL 120
+F TD LLIRR+IYRLSPLD +S+SA+SSS AAEG WLAKVESTKLG MR+L
Sbjct: 61 IFTADHLTDALLIRRVIYRLSPLDHQHSSDSASSSS--FAAEG-WLAKVESTKLGTMRFL 120
Query: 121 HPLSTCYA-YNNNMFWKEV 123
HPLST Y Y+N +F KEV
Sbjct: 121 HPLSTRYVKYDNEVFRKEV 136
BLAST of MS010649 vs. NCBI nr
Match:
KAG6594746.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 157.1 bits (396), Expect = 9.4e-35
Identity = 90/139 (64.75%), Postives = 104/139 (74.82%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
MDDSRV+WSDLPPE+ P LETYID++ WRAS+PPFN +S LLPLDLPSP
Sbjct: 1 MDDSRVQWSDLPPEILPIIGKSLETYIDVLRFRSVCRSWRASLPPFNIVSSLLPLDLPSP 60
Query: 61 VFND---TDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGSWLAKVESTKLGKMRYL 120
+F TD LLIRR+IYRLSPLD +S+SA+SSS AAEG WLAKVESTKLG MR+L
Sbjct: 61 IFTADHLTDALLIRRVIYRLSPLDHQHSSDSASSSS--FAAEG-WLAKVESTKLGTMRFL 120
Query: 121 HPLSTCYA-YNNNMFWKEV 123
HPLST Y Y+N +F KEV
Sbjct: 121 HPLSTRYVKYDNEVFRKEV 136
BLAST of MS010649 vs. ExPASy TrEMBL
Match:
A0A5A7SHJ7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00810 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 8.8e-39
Identity = 97/145 (66.90%), Postives = 111/145 (76.55%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
M+DSRVRWSDLPPELWP L+TYID++ WRAS+PPFNA+SPLLPLDLPSP
Sbjct: 1 MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60
Query: 61 VF---NDTDTLLIRRIIYRLSPLDRHET------SNSAASSSSGAAAEGSWLAKVESTKL 120
VF + TD LIRRIIYRLSPLD H+T S S++SSSS AAEG WLAKVESTKL
Sbjct: 61 VFAADHLTDAFLIRRIIYRLSPLDHHKTFSFASSSTSSSSSSSYCAAEG-WLAKVESTKL 120
Query: 121 GKMRYLHPLSTCYA-YNNNMFWKEV 123
GKMR+LHPLST YA N+++F KEV
Sbjct: 121 GKMRFLHPLSTRYAKCNSDLFRKEV 144
BLAST of MS010649 vs. ExPASy TrEMBL
Match:
A0A1S4DT77 (putative F-box protein At1g65770 OS=Cucumis melo OX=3656 GN=LOC103485361 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 8.8e-39
Identity = 97/145 (66.90%), Postives = 111/145 (76.55%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
M+DSRVRWSDLPPELWP L+TYID++ WRAS+PPFNA+SPLLPLDLPSP
Sbjct: 1 MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60
Query: 61 VF---NDTDTLLIRRIIYRLSPLDRHET------SNSAASSSSGAAAEGSWLAKVESTKL 120
VF + TD LIRRIIYRLSPLD H+T S S++SSSS AAEG WLAKVESTKL
Sbjct: 61 VFAADHLTDAFLIRRIIYRLSPLDHHKTFSFASSSTSSSSSSSYCAAEG-WLAKVESTKL 120
Query: 121 GKMRYLHPLSTCYA-YNNNMFWKEV 123
GKMR+LHPLST YA N+++F KEV
Sbjct: 121 GKMRFLHPLSTRYAKCNSDLFRKEV 144
BLAST of MS010649 vs. ExPASy TrEMBL
Match:
A0A0A0KJJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507420 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
M+DSRVRWSDLPPELWP L+TYID++ WRAS+PPFNA+SPLLPLDLPSP
Sbjct: 1 MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60
Query: 61 VF---NDTDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGS--------WLAKVEST 120
VF + TD LIRRIIYRLSPLD H+T + A+SSSS +++ S WLAKVEST
Sbjct: 61 VFAADHLTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKVEST 120
Query: 121 KLGKMRYLHPLSTCYA-YNNNMFWKEV 123
KLGKMR+LHPLST YA N+++ KEV
Sbjct: 121 KLGKMRFLHPLSTRYAKCNSDLLRKEV 147
BLAST of MS010649 vs. ExPASy TrEMBL
Match:
A0A6J1KNW7 (putative F-box protein At1g65770 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497348 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35
Identity = 90/139 (64.75%), Postives = 104/139 (74.82%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
MDDSRV+WSDLPPE+ P LETYID++ WRAS+PPFN +S LLPLDLPSP
Sbjct: 1 MDDSRVQWSDLPPEILPIIGKSLETYIDVLRFRSVCRSWRASLPPFNIVSSLLPLDLPSP 60
Query: 61 VFND---TDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGSWLAKVESTKLGKMRYL 120
+F TD LLIRR+IYRLSPLD +S+SA+SSS AAEG WLAKVESTKLG MR+L
Sbjct: 61 IFTADHLTDALLIRRVIYRLSPLDHQHSSDSASSSS--FAAEG-WLAKVESTKLGTMRFL 120
Query: 121 HPLSTCYA-YNNNMFWKEV 123
HPLST Y Y+N +F KEV
Sbjct: 121 HPLSTRYVKYDNEVFRKEV 136
BLAST of MS010649 vs. ExPASy TrEMBL
Match:
A0A6J1EGF3 (putative F-box protein At1g65770 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433939 PE=4 SV=1)
HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34
Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 0
Query: 1 MDDSRVRWSDLPPELWP-----LETYIDIV--------WRASIPPFNAISPLLPLDLPSP 60
MDDSRV+WSDLPPE+ P LETYI+++ WRAS+PPFN +S LLPLDLPSP
Sbjct: 1 MDDSRVQWSDLPPEILPIIGKSLETYIEVLRFRSVCRSWRASLPPFNIVSSLLPLDLPSP 60
Query: 61 VFND---TDTLLIRRIIYRLSPLDRHETSNSAASSSSGAAAEGSWLAKVESTKLGKMRYL 120
+F TD LLIRR+IYRLSPLD +S+SA+SSS AAEG WLAKVESTKLG MR+L
Sbjct: 61 IFTADHLTDALLIRRVIYRLSPLDHQHSSDSASSSS--FAAEG-WLAKVESTKLGTMRFL 120
Query: 121 HPLSTCYA-YNNNMFWKEV 123
HPLST Y Y+N +F KEV
Sbjct: 121 HPLSTRYVKYDNEVFRKEV 136
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016899202.1 | 1.8e-38 | 66.90 | PREDICTED: putative F-box protein At1g65770 [Cucumis melo] >KAA0025628.1 putativ... | [more] |
XP_038881861.1 | 2.4e-38 | 66.00 | putative F-box protein At1g65770 [Benincasa hispida] | [more] |
XP_004134837.2 | 7.7e-37 | 62.59 | putative F-box protein At1g65770 [Cucumis sativus] >KGN48969.1 hypothetical prot... | [more] |
XP_023518907.1 | 7.2e-35 | 64.75 | putative F-box protein At1g65770 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAG6594746.1 | 9.4e-35 | 64.75 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SHJ7 | 8.8e-39 | 66.90 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
A0A1S4DT77 | 8.8e-39 | 66.90 | putative F-box protein At1g65770 OS=Cucumis melo OX=3656 GN=LOC103485361 PE=4 SV... | [more] |
A0A0A0KJJ1 | 3.7e-37 | 62.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507420 PE=4 SV=1 | [more] |
A0A6J1KNW7 | 4.5e-35 | 64.75 | putative F-box protein At1g65770 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1EGF3 | 1.3e-34 | 64.03 | putative F-box protein At1g65770 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
Match Name | E-value | Identity | Description | |