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MS009852 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCTAACTATGCTGCCCACAGGCTTCTTGAGTTAAGACCTGATAATGTGGGCCATTATACTTATTTGTTGAGCAATGTACAGGCTAGCTAGTGTTGGGCAGTGCTATGAAGTTGAAAAATTACGAAGTATTGTGTATGAGAAAAATCTTGTCAAGAAA ATCGCTAACTATGCTGCCCACAGGCTTCTTGAGTTAAGACCTGATAATGTGGGCCATTATACTTATTTGTTGAGCAATGTACAGGCTAGTGTTGGGCAGTGCTATGAAGTTGAAAAATTACGAAGTATTGTGTATGAGAAAAATCTTGTCAAGAAA ATCGCTAACTATGCTGCCCACAGGCTTCTTGAGTTAAGACCTGATAATGTGGGCCATTATACTTATTTGTTGAGCAATGTACAGGCTAGTGTTGGGCAGTGCTATGAAGTTGAAAAATTACGAAGTATTGTGTATGAGAAAAATCTTGTCAAGAAA IANYAAHRLLELRPDNVGHYTYLLSNVQASVGQCYEVEKLRSIVYEKNLVKK Homology
BLAST of MS009852 vs. NCBI nr
Match: XP_038883286.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13 Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0
BLAST of MS009852 vs. NCBI nr
Match: XP_022967941.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MS009852 vs. NCBI nr
Match: XP_008457591.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_008457593.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902177.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902178.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902179.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902180.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo]) HSP 1 Score: 83.6 bits (205), Expect = 5.6e-13 Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of MS009852 vs. NCBI nr
Match: XP_022153922.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Momordica charantia]) HSP 1 Score: 83.6 bits (205), Expect = 5.6e-13 Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 0
BLAST of MS009852 vs. NCBI nr
Match: KAE8637250.1 (hypothetical protein CSA_007713 [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 7.3e-13 Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MS009852 vs. ExPASy TrEMBL
Match: A0A6J1HTH3 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467326 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MS009852 vs. ExPASy TrEMBL
Match: A0A1S3C6I7 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497256 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.7e-13 Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of MS009852 vs. ExPASy TrEMBL
Match: A0A6J1DKA1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021322 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.7e-13 Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 0
BLAST of MS009852 vs. ExPASy TrEMBL
Match: A0A6J1EYH5 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439622 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12 Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of MS009852 vs. ExPASy TrEMBL
Match: A0A1S2Y1P3 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cicer arietinum OX=3827 GN=LOC101503623 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.0e-07 Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of MS009852 vs. TAIR 10
Match: AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 7.8e-05 Identity = 21/52 (40.38%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of MS009852 vs. TAIR 10
Match: AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.0e-04 Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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