MS009838 (gene) Bitter gourd (TR) v1

Overview


Name	MS009838
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	glutaredoxin-C1-like
Location	scaffold173: 718819 .. 719208 (-)
RNA-Seq Expression	MS009838
Synteny	MS009838

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGCAGTACCAAGCACACCAGTACGGCGCTTCATCTTCTTCCTCCTCCCGTATCGGAGCTTCGGCCAACGACATGCTGCGGCAGATCGAGCGGATGGCGGCGGAGAACGCGGTAGTCGTATTCAGCGTGAGCACGTGTTGCATGTGCCACGCTGTCAAGAGGCTCTTTTGTGGAATGGGAGTGAACCCAACTGTGTACGAGCTCGACGAGGACCCGAGAGGGAAGGAGATCGAGAAGGCCTTGACAAGGCTGATGGGAAGCGGCTCCTCCCCCGTCCCCGCCGTCTTCATCGGCGGGAAACTCATTGGCTCCCTGGATAGAGTCATGGCCTCCCATATCAACGGCTCTCTCGTCCCCCTCCTCAAAGATGCTGGCGCTCTCTGGCTC

mRNA sequence

AAAATGCAGTACCAAGCACACCAGTACGGCGCTTCATCTTCTTCCTCCTCCCGTATCGGAGCTTCGGCCAACGACATGCTGCGGCAGATCGAGCGGATGGCGGCGGAGAACGCGGTAGTCGTATTCAGCGTGAGCACGTGTTGCATGTGCCACGCTGTCAAGAGGCTCTTTTGTGGAATGGGAGTGAACCCAACTGTGTACGAGCTCGACGAGGACCCGAGAGGGAAGGAGATCGAGAAGGCCTTGACAAGGCTGATGGGAAGCGGCTCCTCCCCCGTCCCCGCCGTCTTCATCGGCGGGAAACTCATTGGCTCCCTGGATAGAGTCATGGCCTCCCATATCAACGGCTCTCTCGTCCCCCTCCTCAAAGATGCTGGCGCTCTCTGGCTC

Coding sequence (CDS)

AAAATGCAGTACCAAGCACACCAGTACGGCGCTTCATCTTCTTCCTCCTCCCGTATCGGAGCTTCGGCCAACGACATGCTGCGGCAGATCGAGCGGATGGCGGCGGAGAACGCGGTAGTCGTATTCAGCGTGAGCACGTGTTGCATGTGCCACGCTGTCAAGAGGCTCTTTTGTGGAATGGGAGTGAACCCAACTGTGTACGAGCTCGACGAGGACCCGAGAGGGAAGGAGATCGAGAAGGCCTTGACAAGGCTGATGGGAAGCGGCTCCTCCCCCGTCCCCGCCGTCTTCATCGGCGGGAAACTCATTGGCTCCCTGGATAGAGTCATGGCCTCCCATATCAACGGCTCTCTCGTCCCCCTCCTCAAAGATGCTGGCGCTCTCTGGCTC

Protein sequence

KMQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPLLKDAGALWL

Homology

[Close]

BLAST of MS009838 vs. NCBI nr
Match: XP_022156514.1 (glutaredoxin-C1-like [Momordica charantia])

HSP 1 Score: 255.0 bits (650), Expect = 3.5e-64
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 2   MQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMG 61
           MQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMG
Sbjct: 1   MQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMG 60

Query: 62  VNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPL 121
           VNPTVYELDEDPRGKEIEKALTRL+GSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPL
Sbjct: 61  VNPTVYELDEDPRGKEIEKALTRLIGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPL 120

Query: 122 LKDAGALWL 131
           LKDAGALWL
Sbjct: 121 LKDAGALWL 129

[Close]

BLAST of MS009838 vs. NCBI nr
Match: XP_038874416.1 (glutaredoxin-C1-like [Benincasa hispida])

HSP 1 Score: 208.4 bits (529), Expect = 3.8e-50
Identity = 110/130 (84.62%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYG+SSSSSS    SAND LR+IERMAAENAVV+FS+++CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGSSSSSSS---YSANDSLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVP 121
           GVNPTVYELDEDPRGKEIEKAL RLMGS SS VPAVFIGGKL+GS+DRVM SHINGSLVP
Sbjct: 61  GVNPTVYELDEDPRGKEIEKALMRLMGS-SSAVPAVFIGGKLVGSMDRVMVSHINGSLVP 120

Query: 122 LLKDAGALWL 131
           LLK+AGALWL
Sbjct: 121 LLKNAGALWL 126

[Close]

BLAST of MS009838 vs. NCBI nr
Match: XP_022983419.1 (glutaredoxin-C1-like [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 106/130 (81.54%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGASSSSSS         +R+IE+MAAENAVV+FS+S+CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASSSSSS--------PMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVP 121
           GVNPTVYELDEDPRGKEIEKAL RLMGS S+ VPAVFIGGKL+GS+DRVMASHINGSLVP
Sbjct: 61  GVNPTVYELDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVP 120

Query: 122 LLKDAGALWL 131
           LLK+AGALWL
Sbjct: 121 LLKNAGALWL 122

[Close]

BLAST of MS009838 vs. NCBI nr
Match: XP_022935242.1 (glutaredoxin-C1-like [Cucurbita moschata])

HSP 1 Score: 203.8 bits (517), Expect = 9.3e-49
Identity = 108/131 (82.44%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGASSSSSS         +R+IERMAAENAVV+FS+S+CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASSSSSS--------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMG-SGSSPVPAVFIGGKLIGSLDRVMASHINGSLV 121
           GVNPTVYELDEDPRGKEIEKAL RLMG S SS VPAVFIGGKL+GS+DRVMASHINGSLV
Sbjct: 61  GVNPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLV 120

Query: 122 PLLKDAGALWL 131
           PLLK+AGALWL
Sbjct: 121 PLLKNAGALWL 123

[Close]

BLAST of MS009838 vs. NCBI nr
Match: XP_023528287.1 (glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.8 bits (517), Expect = 9.3e-49
Identity = 108/131 (82.44%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGASSSSSS         +R+IERMAAENAVV+FS+S+CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASSSSSS--------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMGSGSS-PVPAVFIGGKLIGSLDRVMASHINGSLV 121
           GVNPTVYELDEDPRGKEIEKAL RLMGS SS  VPAVFIGGKL+GS+DRVMASHINGSLV
Sbjct: 61  GVNPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLV 120

Query: 122 PLLKDAGALWL 131
           PLLK+AGALWL
Sbjct: 121 PLLKNAGALWL 123

[Close]

BLAST of MS009838 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.4e-41
Identity = 86/134 (64.18%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 8   QYGASSSSSSRIGASA-----NDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMGV 67
           QYGA++  +  + A+A        + ++ER+A+E+AVVVFSVS+CCMCHAVKRLFCGMGV
Sbjct: 2   QYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGV 61

Query: 68  NPTVYELDEDPRGKEIEKALTRLMGSG----SSP--VPAVFIGGKLIGSLDRVMASHING 127
           +PTV+ELD DPRG+E+E+AL RL+G G    +SP  VP VFIGGKL+G++DRVMA+HING
Sbjct: 62  HPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHING 121

Query: 128 SLVPLLKDAGALWL 131
           SLVPLLK+AGALWL
Sbjct: 122 SLVPLLKEAGALWL 135

[Close]

BLAST of MS009838 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 167.9 bits (424), Expect = 7.4e-41
Identity = 82/134 (61.19%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 8   QYGASS--------SSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCG 67
           QYGA++        +++  + A+A     ++ER+A+E+AVVVFSVS+CCMCHAVKRLFCG
Sbjct: 2   QYGAAAAEQAWYMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCG 61

Query: 68  MGVNPTVYELDEDPRGKEIEKALTRLMGSG---SSPVPAVFIGGKLIGSLDRVMASHING 127
           MGV+P V+ELD DPRG+++E+AL RL+G+G   ++ VP VFIGGKL+G++DRVMA+HING
Sbjct: 62  MGVHPAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHING 121

Query: 128 SLVPLLKDAGALWL 131
           SLVPLLK+AGALWL
Sbjct: 122 SLVPLLKEAGALWL 135

[Close]

BLAST of MS009838 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 5.9e-38
Identity = 86/136 (63.24%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 2   MQYQAHQYGASSSSS---SRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFC 61
           MQYQ   +G+   SS     +G  A+  L +IE +A+E+AVV+FSVSTCCMCHAVK LF 
Sbjct: 1   MQYQTESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFR 60

Query: 62  GMGVNPTVYELDEDPRGKEIEKALTRLMG-SGSS---PVPAVFIGGKLIGSLDRVMASHI 121
           GMGV+P V+ELD  P G +I++AL RL+G SGSS    +P VFIGGKL+G++DRVMASHI
Sbjct: 61  GMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHI 120

Query: 122 NGSLVPLLKDAGALWL 131
           NGSLVPLLKDAGALWL
Sbjct: 121 NGSLVPLLKDAGALWL 136

[Close]

BLAST of MS009838 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 8.5e-37
Identity = 85/140 (60.71%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 2   MQYQAHQYGA-SSSSSSRIGASAN----DMLRQIERMAAENAVVVFSVSTCCMCHAVKRL 61
           MQY+    G+ S +++S++  + N    + L +IE MAAENAVV+FSVSTCCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 62  FCGMGVNPTVYELDEDPRGKEIEKALTRLMGSGS----SP--VPAVFIGGKLIGSLDRVM 121
           F GMGV+P V+ELD  P G EI +AL RL+G  S    SP  +P VFIGGK++G+++RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

Query: 122 ASHINGSLVPLLKDAGALWL 131
           ASHINGSLVPLLKDAGALWL
Sbjct: 121 ASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of MS009838 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.4e-36
Identity = 69/102 (67.65%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 29  QIERMAAENAVVVFSVSTCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALTRLMGS 88
           ++ R+AA+ AVV+FS+S+CCMCH V RLFC +GVNPTV ELDEDPRGKE+EKAL RL+G 
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 89  GSSPVPAVFIGGKLIGSLDRVMASHINGSLVPLLKDAGALWL 131
            S  VPAVFIGG+L+GS D+VM+ H++G+LVPLL++AGALW+
Sbjct: 63  -SPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of MS009838 vs. ExPASy TrEMBL
Match: A0A6J1DTQ0 (glutaredoxin-C1-like OS=Momordica charantia OX=3673 GN=LOC111023397 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 2   MQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMG 61
           MQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMG
Sbjct: 1   MQYQAHQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMG 60

Query: 62  VNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPL 121
           VNPTVYELDEDPRGKEIEKALTRL+GSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPL
Sbjct: 61  VNPTVYELDEDPRGKEIEKALTRLIGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVPL 120

Query: 122 LKDAGALWL 131
           LKDAGALWL
Sbjct: 121 LKDAGALWL 129

[Close]

BLAST of MS009838 vs. ExPASy TrEMBL
Match: A0A6J1J7B3 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 106/130 (81.54%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGASSSSSS         +R+IE+MAAENAVV+FS+S+CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASSSSSS--------PMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVP 121
           GVNPTVYELDEDPRGKEIEKAL RLMGS S+ VPAVFIGGKL+GS+DRVMASHINGSLVP
Sbjct: 61  GVNPTVYELDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVP 120

Query: 122 LLKDAGALWL 131
           LLK+AGALWL
Sbjct: 121 LLKNAGALWL 122

[Close]

BLAST of MS009838 vs. ExPASy TrEMBL
Match: A0A0A0LB28 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G563270 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.5e-49
Identity = 109/130 (83.85%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGAS+SSSS    SAND +R+IERMAAENAVV+FS+++CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASASSSS--SYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVP 121
           GV  TVYELDEDPRGKEIEKAL RLMGS SS VPAVFIGGKLIGS+DRVMASHINGSLVP
Sbjct: 61  GVKTTVYELDEDPRGKEIEKALMRLMGS-SSAVPAVFIGGKLIGSMDRVMASHINGSLVP 120

Query: 122 LLKDAGALWL 131
           LLK AGALWL
Sbjct: 121 LLKSAGALWL 127

[Close]

BLAST of MS009838 vs. ExPASy TrEMBL
Match: A0A6J1F512 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.5e-49
Identity = 108/131 (82.44%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGASSSSSS         +R+IERMAAENAVV+FS+S+CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASSSSSS--------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMG-SGSSPVPAVFIGGKLIGSLDRVMASHINGSLV 121
           GVNPTVYELDEDPRGKEIEKAL RLMG S SS VPAVFIGGKL+GS+DRVMASHINGSLV
Sbjct: 61  GVNPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLV 120

Query: 122 PLLKDAGALWL 131
           PLLK+AGALWL
Sbjct: 121 PLLKNAGALWL 123

[Close]

BLAST of MS009838 vs. ExPASy TrEMBL
Match: A0A5A7V3D7 (Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00530 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 108/130 (83.08%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 2   MQYQA-HQYGASSSSSSRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGM 61
           MQYQA  QYGAS+SSSS    S ND +R+IERMAAENAVV+FS+++CCMCHAVKRLFCGM
Sbjct: 1   MQYQAQQQYGASASSSS--SYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGM 60

Query: 62  GVNPTVYELDEDPRGKEIEKALTRLMGSGSSPVPAVFIGGKLIGSLDRVMASHINGSLVP 121
           GV  TVYELDEDPRGKEIEKAL RLMGS SS VPAVFIGGKLIGS+DRVMASHINGSLVP
Sbjct: 61  GVKTTVYELDEDPRGKEIEKALMRLMGS-SSAVPAVFIGGKLIGSMDRVMASHINGSLVP 120

Query: 122 LLKDAGALWL 131
           LLK AGALWL
Sbjct: 121 LLKSAGALWL 127

[Close]

BLAST of MS009838 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 4.2e-39
Identity = 86/136 (63.24%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 2   MQYQAHQYGASSSSS---SRIGASANDMLRQIERMAAENAVVVFSVSTCCMCHAVKRLFC 61
           MQYQ   +G+   SS     +G  A+  L +IE +A+E+AVV+FSVSTCCMCHAVK LF 
Sbjct: 1   MQYQTESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFR 60

Query: 62  GMGVNPTVYELDEDPRGKEIEKALTRLMG-SGSS---PVPAVFIGGKLIGSLDRVMASHI 121
           GMGV+P V+ELD  P G +I++AL RL+G SGSS    +P VFIGGKL+G++DRVMASHI
Sbjct: 61  GMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHI 120

Query: 122 NGSLVPLLKDAGALWL 131
           NGSLVPLLKDAGALWL
Sbjct: 121 NGSLVPLLKDAGALWL 136

[Close]

BLAST of MS009838 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 6.0e-38
Identity = 85/140 (60.71%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 2   MQYQAHQYGA-SSSSSSRIGASAN----DMLRQIERMAAENAVVVFSVSTCCMCHAVKRL 61
           MQY+    G+ S +++S++  + N    + L +IE MAAENAVV+FSVSTCCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 62  FCGMGVNPTVYELDEDPRGKEIEKALTRLMGSGS----SP--VPAVFIGGKLIGSLDRVM 121
           F GMGV+P V+ELD  P G EI +AL RL+G  S    SP  +P VFIGGK++G+++RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

Query: 122 ASHINGSLVPLLKDAGALWL 131
           ASHINGSLVPLLKDAGALWL
Sbjct: 121 ASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of MS009838 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 8.7e-29
Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 27  LRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALTRLM 86
           +  +++M +E +VV+FS ++CCM H +K LF  +GVNPT+YELDE  RGKEIE AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 87  GSGSSP-VPAVFIGGKLIGSLDRVMASHINGSLVPLLKDAGALWL 131
             G SP VP VFIGG+L+G  ++VM+ H+N SLVP+LK AGALWL
Sbjct: 61  --GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of MS009838 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28
Identity = 57/105 (54.29%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 27  LRQIERMAAENAVVVFSVSTCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALTRLM 86
           + ++++M +E ++V+FS ++CCM H +K LF  +GVNPT+YELDE  RGKEIE+AL +L 
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 87  GSGSSP-VPAVFIGGKLIGSLDRVMASHINGSLVPLLKDAGALWL 131
             G SP VP VFIGG+L+G  ++VM+ H+N SL+P+LK  GALWL
Sbjct: 61  --GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]

BLAST of MS009838 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-28
Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 29  QIERMAAENAVVVFSVSTCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALTRLMGS 88
           ++++M +E +VV+FS ++CCM H +K LF   GVNPT+YELDE  RGKEIE+AL +L   
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL--- 62

Query: 89  GSSP-VPAVFIGGKLIGSLDRVMASHINGSLVPLLKDAGALWL 131
           G SP VP VFIGG+L+G  ++VM+ H+N SLVP+LK  GALWL
Sbjct: 63  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of MS009838 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156514.1	3.5e-64	99.22	glutaredoxin-C1-like [Momordica charantia]	[more]
XP_038874416.1	3.8e-50	84.62	glutaredoxin-C1-like [Benincasa hispida]	[more]
XP_022983419.1	2.4e-49	81.54	glutaredoxin-C1-like [Cucurbita maxima]	[more]
XP_022935242.1	9.3e-49	82.44	glutaredoxin-C1-like [Cucurbita moschata]	[more]
XP_023528287.1	9.3e-49	82.44	glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS009838 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K609	7.4e-41	64.18	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q0JDM4	7.4e-41	61.19	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q96305	5.9e-38	63.24	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]
Q8LF89	8.5e-37	60.71	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q7G8Y5	9.4e-36	67.65	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of MS009838 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTQ0	1.7e-64	99.22	glutaredoxin-C1-like OS=Momordica charantia OX=3673 GN=LOC111023397 PE=3 SV=1	[more]
A0A6J1J7B3	1.2e-49	81.54	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1	[more]
A0A0A0LB28	4.5e-49	83.85	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G56327...	[more]
A0A6J1F512	4.5e-49	82.44	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1	[more]
A0A5A7V3D7	1.3e-48	83.08	Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G...	[more]

BLAST of MS009838 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02000.1	4.2e-39	63.24	Thioredoxin superfamily protein	[more]
AT5G14070.1	6.0e-38	60.71	Thioredoxin superfamily protein	[more]
AT4G15700.1	8.7e-29	57.14	Thioredoxin superfamily protein	[more]
AT4G15670.1	3.3e-28	54.29	Thioredoxin superfamily protein	[more]
AT4G15680.1	4.3e-28	57.28	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 39..57 score: 37.28 coord: 100..113 score: 27.98 coord: 86..99 score: 40.77
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 39..103 e-value: 5.7E-15 score: 55.3
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 30..130 e-value: 4.0E-43 score: 143.4
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 6..129
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 21..129 e-value: 7.8E-32 score: 111.3
None	No IPR available	PIRSR	PIRSR005894-2	PIRSR005894-2	coord: 26..126 e-value: 0.0051 score: 14.6
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 6..129
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 27..129 score: 23.092373
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 38..121 e-value: 6.23933E-41 score: 129.197
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 28..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009838.1	MS009838.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity