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MS009837 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGACGAGGACCTGATCGAGCTTAAGTTCCGACTTTATGATGGATCGGATATCGGTCCGTTTCGTTATTCACCAACTTCGACAATAGCGATGGTGAAGGAGAGAATCTTGGCAGAGTGGCCTAAAGGTCAGGGAGTTTTATTTTACTCGTCTGGGTTTTCAATTTGTGAACTGTTGCATGGTCATTACACTCGCCACTTTATTCTAGTCAGCTGTACTTATATAACTTCATGTTCTCTTTTAATTGAACCCTGCTGTGTGTGTCGACAATTGACTTATTGACTTGGAAGCTTGGAGCTCAACTTAGAACATGTATATACATGGAAAGAAGAAAGATAAATAAAGATAACTTAGACAAGTGTACTGGCTCACGTGGTTCGCAAGAAGGAATAACTGATATATATATATATTATATATAGTTTTATCCTTTCCTTCAATTTCCTTCAACTCTATAGGGTGAAAGAGAACAAATGAAGGATTGCTAGAAATAAGTATGGGTTCTGTCAGGAATCTTATTTAATCAGTAAATCCTTCTCAGGATGATAATCAGAGCCAGAGGTTAATAATTACCACCTCTGTCTTTGTTGATCAAGCTGGATAGGAATATTGTACGTTTTTGCATTGTAGATTTTCTTGGAGCCTGGAGGCCTGTTTTGTAATTTGTTACAGAAGAGTGAGAATCTATTCTAACTTTATCTTCACGTTTTCCTTTTATGGCTGAATGAGTTGGAGTGCTCTTAGATTCAGTCCACTTTTCAAGTTCATACTTCAGATAATAGTTATGATAAGAATGTATCTTATGCTTACTCGTTTTTGAGTAGCAGGAGAAGGGTATAGACCGATTGGTTCCAAAATAATACTAGTTGGTATCCTATCTAGAGACGAGTATTTTCAGACATGGATTGTGCCAACTAATAATAACATGGAATAAAGAAATTCATTCCTCCAGAATGTTTCTTCCCTTTGTTCGAGTATTTTGCATTTCTTTCTCACTTCATTTGCCTGTCCAACTTTATGCGACCTAACTATTTCTGTAAATGTTTTAATTTTTTAGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTCGGAGAGCTGCCTAGAGGAGTTATCACTATGCACGTTGTGGTGCAGCCAACTATAGCAAAAGCGAAAACAGGTAGCCAT ATGCCGGACGAGGACCTGATCGAGCTTAAGTTCCGACTTTATGATGGATCGGATATCGGTCCGTTTCGTTATTCACCAACTTCGACAATAGCGATGGTGAAGGAGAGAATCTTGGCAGAGTGGCCTAAAGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTCGGAGAGCTGCCTAGAGGAGTTATCACTATGCACGTTGTGGTGCAGCCAACTATAGCAAAAGCGAAAACAGGTAGCCAT ATGCCGGACGAGGACCTGATCGAGCTTAAGTTCCGACTTTATGATGGATCGGATATCGGTCCGTTTCGTTATTCACCAACTTCGACAATAGCGATGGTGAAGGAGAGAATCTTGGCAGAGTGGCCTAAAGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTCGGAGAGCTGCCTAGAGGAGTTATCACTATGCACGTTGTGGTGCAGCCAACTATAGCAAAAGCGAAAACAGGTAGCCAT MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERILAEWPKDKKVVPKAANDIKLINAGKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTGSH Homology
BLAST of MS009837 vs. NCBI nr
Match: XP_022156522.1 (membrane-anchored ubiquitin-fold protein 4-like [Momordica charantia]) HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. NCBI nr
Match: KAA0060276.1 (membrane-anchored ubiquitin-fold protein 4 [Cucumis melo var. makuwa] >TYK23039.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49 Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of MS009837 vs. NCBI nr
Match: XP_038905050.1 (membrane-anchored ubiquitin-fold protein 4-like [Benincasa hispida]) HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48 Identity = 95/100 (95.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. NCBI nr
Match: XP_004148006.2 (membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_011651547.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_031737935.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_031737936.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_031737937.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >KGN58155.1 hypothetical protein Csa_017641 [Cucumis sativus]) HSP 1 Score: 200.7 bits (509), Expect = 6.2e-48 Identity = 94/100 (94.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. NCBI nr
Match: XP_022928244.1 (membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata] >XP_022928245.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata] >XP_022928246.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata]) HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47 Identity = 94/100 (94.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 2.9e-40 Identity = 73/99 (73.74%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS009837 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 8.8e-37 Identity = 66/100 (66.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of MS009837 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2) HSP 1 Score: 134.4 bits (337), Expect = 7.2e-31 Identity = 59/97 (60.82%), Postives = 80/97 (82.47%), Query Frame = 0
BLAST of MS009837 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.0e-30 Identity = 56/87 (64.37%), Postives = 75/87 (86.21%), Query Frame = 0
BLAST of MS009837 vs. ExPASy Swiss-Prot
Match: Q9SH14 (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MUB5 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.3e-28 Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of MS009837 vs. ExPASy TrEMBL
Match: A0A6J1DS77 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111023404 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 5.5e-50 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. ExPASy TrEMBL
Match: A0A5A7V1C2 (Membrane-anchored ubiquitin-fold protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3819G00060 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 9.4e-50 Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of MS009837 vs. ExPASy TrEMBL
Match: A0A0A0L887 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_3G563280 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.0e-48 Identity = 94/100 (94.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. ExPASy TrEMBL
Match: A0A6J1ER66 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111435138 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.2e-48 Identity = 94/100 (94.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of MS009837 vs. ExPASy TrEMBL
Match: A0A1S3BNL5 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103491812 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47 Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 0
BLAST of MS009837 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor ) HSP 1 Score: 165.6 bits (418), Expect = 2.1e-41 Identity = 73/99 (73.74%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS009837 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein ) HSP 1 Score: 154.1 bits (388), Expect = 6.2e-38 Identity = 66/100 (66.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of MS009837 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor ) HSP 1 Score: 125.6 bits (314), Expect = 2.4e-29 Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of MS009837 vs. TAIR 10
Match: AT1G22050.1 (membrane-anchored ubiquitin-fold protein 6 precursor ) HSP 1 Score: 121.3 bits (303), Expect = 4.5e-28 Identity = 54/96 (56.25%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of MS009837 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 ) HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25 Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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