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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. GGCTCCCAGCAATCTGTCCGCTACGAATTCTATGTACTGGCTCATCAGATCGCCGTTCATTCCGACGAGAGCCACCGGCAATGCATCGCACACGAACTCCCTCTCTATATCCACCGCCTCCCGAACAATCTCCTTCACTCGATCCCCGCTCAGTTTCTTCCTCAAGAGCGAATACAGCAAACAGGCGAAATCGCAATGGAGACCTTCGTCTCGCGAAATCAGCTCGTTGGAGAACGTGAGTCCGGGCATTAATCCACGTTTTTTCAGCCAGAAAATGGAGCAGAAACTCCCGGAGAAGAAGATTCCCTCAACGCAAGCGAAAGCCAGAATCCGCTCGGCGAACGATTCGGTGCTATCGATCCACTTCAACGCCCATTCGGCCTTCTTCGCGACGCAAGGGACGGTCTCGATCGCGCGAAACAACCGGCTCTTCTCATTCGAATCTTTAATATACGTTTCCAGGAGAAGACTATACATCTCGGAGTGAATATTCTCAATCGCGATCTGGAATCCATAGAACGCTCTGGCCTCCGCGACCTGCACCTCCTTCATGAACCGTCCGGCAAGATTCTCCAAAACAATGCCGTCGGAGGCAGCGAAGAAGGCGAGAACGTGCGTGATGAAGTGCTTCTCGTCGGGAGTAAGGGATTCCCAGTGGCGGAGATCCTGCGAGAGATCGACTTCCTCGGCGGTCCAAAATGAAGCTTCAGCCTTCTTGTACATTTCCCAGACC mRNA sequence GGCTCCCAGCAATCTGTCCGCTACGAATTCTATGTACTGGCTCATCAGATCGCCGTTCATTCCGACGAGAGCCACCGGCAATGCATCGCACACGAACTCCCTCTCTATATCCACCGCCTCCCGAACAATCTCCTTCACTCGATCCCCGCTCAATTCTCCAAAACAATGCCGTCGGAGGCAGCGAAGAAGGCGAGAACGTGCGTGATGAAGTGCTTCTCGTCGGGAGTAAGGGATTCCCAGTGGCGGAGATCCTGCGAGAGATCGACTTCCTCGGCGGTCCAAAATGAAGCTTCAGCCTTCTTGTACATTTCCCAGACC Coding sequence (CDS) GGCTCCCAGCAATCTGTCCGCTACGAATTCTATGTACTGGCTCATCAGATCGCCGTTCATTCCGACGAGAGCCACCGGCAATGCATCGCACACGAACTCCCTCTCTATATCCACCGCCTCCCGAACAATCTCCTTCACTCGATCCCCGCTCAATTCTCCAAAACAATGCCGTCGGAGGCAGCGAAGAAGGCGAGAACGTGCGTGATGAAGTGCTTCTCGTCGGGAGTAAGGGATTCCCAGTGGCGGAGATCCTGCGAGAGATCGACTTCCTCGGCGGTCCAAAATGAAGCTTCAGCCTTCTTGTACATTTCCCAGACC Protein sequence GSQQSVRYEFYVLAHQIAVHSDESHRQCIAHELPLYIHRLPNNLLHSIPAQFSKTMPSEAAKKARTCVMKCFSSGVRDSQWRRSCERSTSSAVQNEASAFLYISQT
Homology
BLAST of MS009822 vs. ExPASy TrEMBL
Match: A0A0A0KP12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524680 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 9.1e-24 Identity = 67/102 (65.69%), Postives = 79/102 (77.45%), Query Frame = 0 Query: 6 VRYEFYVLAHQIAVHSDESHRQCIAHELPLYIHRLPNNLLHSI-PAQFSKTMPSEAAKK- 65 + +F VL HQIA+HS++ HRQ I +E PLY+H L NN H+I A+FSKT+ SEAAKK Sbjct: 7 ISQKFNVLTHQIAIHSNKKHRQSIINEFPLYVHGLSNNRPHTIRSARFSKTIASEAAKKE 66
Query: 66 ARTCVMKCFSSGVRDSQWRRSCERSTSSAVQNEASAFLYISQ 106 ARTCVMKCFSS ++ SQ RRS ERSTSS VQ EA AFLYISQ Sbjct: 67 ARTCVMKCFSSELKQSQSRRSYERSTSSVVQKEAWAFLYISQ 108
BLAST of MS009822 vs. ExPASy TrEMBL
Match: A0A0A9IFI0 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.0e-07 Identity = 39/53 (73.58%), Postives = 41/53 (77.36%), Query Frame = 0 Query: 50 AQFSKTMPSEAAKKARTCVMKCFSSG-VRDSQWRRSCERSTSSAVQNEASAFL 102 A+FS TMPSEAAKKART MK SSG SQWR S ERSTSSAVQ EA+AFL Sbjct: 5 ARFSSTMPSEAAKKARTWEMKWRSSGESASSQWRASAERSTSSAVQKEATAFL 57
BLAST of MS009822 vs. ExPASy TrEMBL
Match: A0A0A9I3F8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06 Identity = 38/53 (71.70%), Postives = 40/53 (75.47%), Query Frame = 0 Query: 50 AQFSKTMPSEAAKKARTCVMKCFSSG-VRDSQWRRSCERSTSSAVQNEASAFL 102 A+FS TMPSEAAKKA T MK SSG SQWR S ERSTSSAVQ EA+AFL Sbjct: 5 ARFSSTMPSEAAKKASTWEMKWRSSGESASSQWRASAERSTSSAVQKEATAFL 57
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KP12 | 9.1e-24 | 65.69 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524680 PE=4 SV=1 | [more] |
A0A0A9IFI0 | 2.0e-07 | 73.58 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
A0A0A9I3F8 | 1.0e-06 | 71.70 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS009822.1 | MS009822.1 | mRNA |
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