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MS009803 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCCTGCGTTTCAATCCATAGAAATTCCGATTCCCCCATGAAGCTCACTCTCTCCAAAACCGACCAGATTCTAATCCCCCCCTCGCCGATTAAAGACAACAACAACAACGCCGCCGTTTTCGTCACGCCCCCTCCTGAACGCCACTGTAAGCCCCTTCTTCTTCTTCACTTTCAGAAGCTTAATCCACTTCTAGTTCTGTGTTTTAGCTTTTAGTTGAGTGATGAACTATCAACACTCTTAATTTTACTTTTGATTTTGATTTTTATGTCTATTGTATTCTGCTTTACAATCAGTGCTTGCAAAGTCGTATGCGATCTAAAGTGTTTGCTTATTGCGTGTCCCTGATTTGACTTTCTTTGCTTTCACATCCAAGTTGGCTTTCTTTTCTTTTTCTAATCGAATATCTTATAGAATCATTGCCTTTTTGAAAGTTTGTTTAATTGGAATAATAAAGTTAATCTAGGTCCCATTTTTGTATATTTTAAACTGAGAAATCGATTCTTTTTTCATATACAAATCTGCAAAAATATCTGATAATTCAAATTAGAGAATTCCAGGCTCAAGTTTGAGCACCTCTTGGAACTTTTCTGTTTGCAGAGATGGAGAAACCTTTGTTCAGTAGAGATGACCAGGTTGATTTAGAACTCAGAAATCCTGTTTCCAGCAAACTTAAAAAACTCATGTATTGTCCAGTGGATTGTGGTTAATTATCATAGATTCATATAGAAGAAAAATAAAAATAATATCCCACAGTGCTCTGCTACTTCAGTTTACTAACTTCTGCTGTGAGGATGGGTATAGCTATGTAGCGATCACTTTTTGGTTGATCCTATAATTCCTCTTTTCTTATTTCTTTTTTCATTTTTTTCGGGTGTAGGATTTTTTGTGTGTGCCAGTATCATGAGTTTCTCTCTTCATCTCACATGAAGCATGCCTGTGTTCATGGAAAGTGAGTGTGGGATAGCATACAAGTTAGGAACCCTTTATTTTGGTCCTTTTACTTTCAAAACGCCCATTTTGGTTTCTATAAATTTGTACTAATGAAATGTAATCATAGATTTGTATTGAAGTAAACAAACATTAAAAGTACAGGACCAAAATAGATGTATTCAAAGTAAAGGGACCAAAGCGGAAAGTACAGGGATTAAAATATATTTATACCTTTTATATTCATTGTTTTGGGCCCTGTCCTACTATCTGTAAGGAGACATCTTGCACCCCAAGGTTCGAACCAAAGACCTTTGTAACTTCTGTCTAGACATTCGAAGCCCTTACCACTGAGGCCAGACGGCCGGTTTATCATAGGTTCAGTTTGGTCTCGCCTATTCGCTTTTGAGGGCAATGGGGTTTGCCCCTTTTGAGGAACTATTAGAAAAAGGAGAAGAGGGTGAAAGTGAGAGTATTCTTCCTAGGAAGTGCAGAGCAGAAGCATGTTCTGTTTAAGACTTCTTTCACAAGAATGCTATAATTCTGTTCCATTGAGAACATCACACACTTTTTCACTCACTCCTTTCTATCCATGGAGTTTCAGATTCTTGCTGTTATGATGCGGTGATCCGAATCCATTATGACCAAACTCGAAAAGTTTTTAGTGTGTTATTTTGAGATTGTGGCCTTCGTAGGCCGCCATGGAACTCCCTCACTTACGTGTCCATGACTTTCTTGACATTCCTTATGTTTCATCATATATCTTGACCCTTTTCATAACAACTCTGAAATAGCTAGTTATGAAAGAAGCAAGTTGAAAATTGAGCTCTTTTTGTAGATAGCAAAGATGAAGCGTTTTTTGATTCCCGGGCCTGGTTGGATTCTGATTGTGAAGATGATTTCTACAGTGTCAATGGTGGTAAGTAGACATATGAATTTTTTTATGCTATTTGATTTTTCATCTCTCTCCTGAAGTATTCAATGGCAATGGATTTGGCTTCCTTCCATTTATATATCCTCAGATTTCACCCCTTCGCGAGGAAACACTCCAGTACGAGGAAACACTCCGGTACATCACAAATTCTCCTCCGGTACTCCTCGGGTGAATCAAGTTCATTTCATTGATGATCAAACTCCAGCCACCATGCCTGAACCATCCCCAACAGGAAAGAAGAAGCTGGCTGAACTGTTTAGGGAGGGCTCAAGAAATGGCACTGACATACAACCCAAACCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCTGAAACACCTTACATGTCAGGAACAACCTCTCTATGCGGCAGCGAAAGGACCCCGAATGAAGATGTCTGGATGGAGAAGGAGAAGCCATTTGGGTCTGTACAGTGCTGCCTTCCAAGCTTGCGATCGTGCCATAGCTTCAGCGACCGGAGGAAGAAGACAAGTCCTGCCATAGCTGTA ATGGGTTCCTGCGTTTCAATCCATAGAAATTCCGATTCCCCCATGAAGCTCACTCTCTCCAAAACCGACCAGATTCTAATCCCCCCCTCGCCGATTAAAGACAACAACAACAACGCCGCCGTTTTCGTCACGCCCCCTCCTGAACGCCACTATAGCAAAGATGAAGCGTTTTTTGATTCCCGGGCCTGGTTGGATTCTGATTGTGAAGATGATTTCTACAGTGTCAATGGTGGAAACACTCCAGTACGAGGAAACACTCCGGTACATCACAAATTCTCCTCCGGTACTCCTCGGGTGAATCAAGTTCATTTCATTGATGATCAAACTCCAGCCACCATGCCTGAACCATCCCCAACAGGAAAGAAGAAGCTGGCTGAACTGTTTAGGGAGGGCTCAAGAAATGGCACTGACATACAACCCAAACCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCTGAAACACCTTACATGTCAGGAACAACCTCTCTATGCGGCAGCGAAAGGACCCCGAATGAAGATGTCTGGATGGAGAAGGAGAAGCCATTTGGGTCTGTACAGTGCTGCCTTCCAAGCTTGCGATCGTGCCATAGCTTCAGCGACCGGAGGAAGAAGACAAGTCCTGCCATAGCTGTA ATGGGTTCCTGCGTTTCAATCCATAGAAATTCCGATTCCCCCATGAAGCTCACTCTCTCCAAAACCGACCAGATTCTAATCCCCCCCTCGCCGATTAAAGACAACAACAACAACGCCGCCGTTTTCGTCACGCCCCCTCCTGAACGCCACTATAGCAAAGATGAAGCGTTTTTTGATTCCCGGGCCTGGTTGGATTCTGATTGTGAAGATGATTTCTACAGTGTCAATGGTGGAAACACTCCAGTACGAGGAAACACTCCGGTACATCACAAATTCTCCTCCGGTACTCCTCGGGTGAATCAAGTTCATTTCATTGATGATCAAACTCCAGCCACCATGCCTGAACCATCCCCAACAGGAAAGAAGAAGCTGGCTGAACTGTTTAGGGAGGGCTCAAGAAATGGCACTGACATACAACCCAAACCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCTGAAACACCTTACATGTCAGGAACAACCTCTCTATGCGGCAGCGAAAGGACCCCGAATGAAGATGTCTGGATGGAGAAGGAGAAGCCATTTGGGTCTGTACAGTGCTGCCTTCCAAGCTTGCGATCGTGCCATAGCTTCAGCGACCGGAGGAAGAAGACAAGTCCTGCCATAGCTGTA MGSCVSIHRNSDSPMKLTLSKTDQILIPPSPIKDNNNNAAVFVTPPPERHYSKDEAFFDSRAWLDSDCEDDFYSVNGGNTPVRGNTPVHHKFSSGTPRVNQVHFIDDQTPATMPEPSPTGKKKLAELFREGSRNGTDIQPKPTLNELALQSNPETPYMSGTTSLCGSERTPNEDVWMEKEKPFGSVQCCLPSLRSCHSFSDRRKKTSPAIAV Homology
BLAST of MS009803 vs. NCBI nr
Match: XP_022154205.1 (uncharacterized protein At3g27210-like [Momordica charantia]) HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118 Identity = 211/218 (96.79%), Postives = 211/218 (96.79%), Query Frame = 0
BLAST of MS009803 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 8.2e-87 Identity = 167/219 (76.26%), Postives = 175/219 (79.91%), Query Frame = 0
BLAST of MS009803 vs. NCBI nr
Match: XP_011651566.1 (uncharacterized protein At3g27210 isoform X1 [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 4.1e-86 Identity = 167/219 (76.26%), Postives = 175/219 (79.91%), Query Frame = 0
BLAST of MS009803 vs. NCBI nr
Match: XP_038901054.1 (uncharacterized protein At3g27210-like [Benincasa hispida]) HSP 1 Score: 325.1 bits (832), Expect = 4.5e-85 Identity = 165/219 (75.34%), Postives = 176/219 (80.37%), Query Frame = 0
BLAST of MS009803 vs. NCBI nr
Match: KAG6581091.1 (hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 308.5 bits (789), Expect = 4.4e-80 Identity = 160/225 (71.11%), Postives = 173/225 (76.89%), Query Frame = 0
BLAST of MS009803 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17 Identity = 74/212 (34.91%), Postives = 101/212 (47.64%), Query Frame = 0
BLAST of MS009803 vs. ExPASy TrEMBL
Match: A0A6J1DIZ4 (uncharacterized protein At3g27210-like OS=Momordica charantia OX=3673 GN=LOC111021519 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 8.8e-119 Identity = 211/218 (96.79%), Postives = 211/218 (96.79%), Query Frame = 0
BLAST of MS009803 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 4.0e-87 Identity = 167/219 (76.26%), Postives = 175/219 (79.91%), Query Frame = 0
BLAST of MS009803 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 2.0e-86 Identity = 167/219 (76.26%), Postives = 175/219 (79.91%), Query Frame = 0
BLAST of MS009803 vs. ExPASy TrEMBL
Match: A0A6J1F463 (uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 3.1e-79 Identity = 161/226 (71.24%), Postives = 173/226 (76.55%), Query Frame = 0
BLAST of MS009803 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.2e-77 Identity = 156/226 (69.03%), Postives = 172/226 (76.11%), Query Frame = 0
BLAST of MS009803 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-19 Identity = 77/222 (34.68%), Postives = 105/222 (47.30%), Query Frame = 0
BLAST of MS009803 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 91.7 bits (226), Expect = 7.8e-19 Identity = 74/212 (34.91%), Postives = 101/212 (47.64%), Query Frame = 0
BLAST of MS009803 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17 Identity = 58/154 (37.66%), Postives = 77/154 (50.00%), Query Frame = 0
BLAST of MS009803 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-12 Identity = 68/215 (31.63%), Postives = 89/215 (41.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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