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MS009794 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGAGCCAAACTAGATTATTTAGAAGCATTATCAATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAAAGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAATGTTATGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAACGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAAACAACTCTATTAAGGCCAAGAAT ATGGCTATGAGCCAAACTAGATTATTTAGAAGCATTATCAATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAAAGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAATGTTATGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAACGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAAACAACTCTATTAAGGCCAAGAAT ATGGCTATGAGCCAAACTAGATTATTTAGAAGCATTATCAATGCCAAAGATGCAATCAAAGTGACGTCTGTGAGAACATTTGCTGCTGGAGGTAAAAAGAAGGGCTCTAAAGGCGGTGCGGCTGCTGATGGTCCTAAAGCATCAATTCTAAGTAAAGAGGTCAAGTCTTCCACTGTTGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAATGTTATGGCAGACTCGGAGTACCCCGATTGGCTGTGGCGTTTGATCGATAAACATCCAGCTCTGAGTGAATTACGCAGGAAGAATGTCGAAGCCCTTCCCTACGAGGATCTGAAACGATTCGTTAAACTGGATAATCGAGCAAGTATTAAGGAAAACAACTCTATTAAGGCCAAGAAT MAMSQTRLFRSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTVVGANILKEGADPNVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKRFVKLDNRASIKENNSIKAKN Homology
BLAST of MS009794 vs. NCBI nr
Match: XP_022154133.1 (54S ribosomal protein L37, mitochondrial-like [Momordica charantia]) HSP 1 Score: 246.9 bits (629), Expect = 9.7e-62 Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0
BLAST of MS009794 vs. NCBI nr
Match: XP_022989738.1 (54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51 Identity = 112/132 (84.85%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of MS009794 vs. NCBI nr
Match: XP_038883607.1 (54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_038883608.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 3.2e-49 Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of MS009794 vs. NCBI nr
Match: XP_038883606.1 (39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 3.2e-49 Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of MS009794 vs. NCBI nr
Match: XP_022928329.1 (54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata] >XP_022928331.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 204.1 bits (518), Expect = 7.2e-49 Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of MS009794 vs. ExPASy Swiss-Prot
Match: Q9CPW3 (39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.5e-04 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of MS009794 vs. ExPASy TrEMBL
Match: A0A6J1DJG1 (54S ribosomal protein L37, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021461 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 4.7e-62 Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0
BLAST of MS009794 vs. ExPASy TrEMBL
Match: A0A6J1JQ61 (54S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111486735 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.5e-52 Identity = 112/132 (84.85%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of MS009794 vs. ExPASy TrEMBL
Match: A0A6J1EKI4 (54S ribosomal protein L37, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435190 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.5e-49 Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of MS009794 vs. ExPASy TrEMBL
Match: A0A7J6DU88 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_014279 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.9e-47 Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of MS009794 vs. ExPASy TrEMBL
Match: A0A7J6EZF4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_013579 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.9e-47 Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of MS009794 vs. TAIR 10
Match: AT3G01740.1 (Mitochondrial ribosomal protein L37 ) HSP 1 Score: 160.2 bits (404), Expect = 1.1e-39 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of MS009794 vs. TAIR 10
Match: AT5G14290.1 (Mitochondrial ribosomal protein L37 ) HSP 1 Score: 142.5 bits (358), Expect = 2.4e-34 Identity = 79/132 (59.85%), Postives = 97/132 (73.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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