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MS009787 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGGTAGAGGTTAAATTTGCAGATGGAAGTCTGTTCAATTTGTCAGCTGAATTCTTGAGAATATATAGCCCAGCTGTTGATGCTAAGGTCAGATCAATTGGGGGTGAAAAGGTATTGTAGAAACAAACTTTTAATTTCACCTGCACGGCCTCACTCTTTGTAACCTTCTTTTCTTTGCTTCTTTTGCAAGACATTTCCATTAGCTTTTAATCTGAAAATTGTGATCAACTCGCCCTTGATTGGTCCAATGGTTGAAGAGAAAAACACTCTTCAACCTGCGAAGTCTGATGCTAAATTGTAGTTTCCACCATAGGATTTTAAATATCTTACGAATTTTCTTGCACTAAATGCTGTAGGCAAGACAATTATCCTATAAAATTAGTCAAGATGCAAGATGTATGTAAGCTTGGTTACCACATTCACACTTATCTCTTTAAAGACAGTTGATTAGTTTTGGACCTCAAGTGTAAAAAATTTGACTGACCGTTGATGCAATAGAAGCACATGACTTCTTGCTGCTTTTTTATTTAAAAAAAGAAATGCAATAATATGCAGGGCCATACAAAAAACAAGTCCGACAAAAATGGATCTACCTATAAAAACGGACCTCAATCCAAAGAATAACACCCTAAATGATAATTACAAAGAGCCTTAGAAATCGACACTCAGAGAGAGGTATGAAATCTAACCAGCTCCCAAATTTCCCTCCAAAACCTCTTAACTCACCTCAGAATTCTACTATTCCTCTCGACCCTACTTGTAAGTATCTGATATTCAGACTCAATAGGTTTATGAGATATCACTGCCCTTATTCTATAGCTACATTTTTGGAGGTTTTCATATATAAGGGGTGTGCAATGGTCTCTTTGACTGCTCATCTTGTACAATTTTATGTTTAGCCACATTCTCATGATCTGATGCTTCTACTGTATTATCAATAACATCTTAAATTTTGGGTACTTTGTTTATAAGATCCAATTATTAAATTCGTGATTTTGAAGTAGGTGATTTCTGGGCGGCGTCACGTGGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGTACTTTGAAATTACTAATAAATATGGGTGTTTCTGAAATCTAAATAATCTCTTTCCATATTGGCTTGCAAGAATCTGAACATATTATTTTGGTCCTGGAAATTTTGTTGTTGCTACAATTTGCTAGGATACTTTTTGATGACTTGCATAAGACTGGGATTTATTCATGGGATTATTTCTACCATCTCGGGAGCAACAAATTTACACTCTTGAGAAATTATGTTAGAACACTACAGAAGCATGGGCTGAGTCGAGATCCACCTAGGAGAAAA CAGGTAGAGGTTAAATTTGCAGATGGAAGTCTGTTCAATTTGTCAGCTGAATTCTTGAGAATATATAGCCCAGCTGTTGATGCTAAGGTCAGATCAATTGGGGGTGAAAAGGTGATTTCTGGGCGGCGTCACGTGGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATACTTTTTGATGACTTGCATAAGACTGGGATTTATTCATGGGATTATTTCTACCATCTCGGGAGCAACAAATTTACACTCTTGAGAAATTATGTTAGAACACTACAGAAGCATGGGCTGAGTCGAGATCCACCTAGGAGAAAA CAGGTAGAGGTTAAATTTGCAGATGGAAGTCTGTTCAATTTGTCAGCTGAATTCTTGAGAATATATAGCCCAGCTGTTGATGCTAAGGTCAGATCAATTGGGGGTGAAAAGGTGATTTCTGGGCGGCGTCACGTGGGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATACTTTTTGATGACTTGCATAAGACTGGGATTTATTCATGGGATTATTTCTACCATCTCGGGAGCAACAAATTTACACTCTTGAGAAATTATGTTAGAACACTACAGAAGCATGGGCTGAGTCGAGATCCACCTAGGAGAAAA QVEVKFADGSLFNLSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGSNKFTLLRNYVRTLQKHGLSRDPPRRK Homology
BLAST of MS009787 vs. NCBI nr
Match: XP_022154140.1 (uncharacterized protein LOC111021468 isoform X1 [Momordica charantia]) HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of MS009787 vs. NCBI nr
Match: XP_022984013.1 (uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]) HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50 Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of MS009787 vs. NCBI nr
Match: XP_022935010.1 (uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]) HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50 Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of MS009787 vs. NCBI nr
Match: KAG7017806.1 (hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50 Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of MS009787 vs. NCBI nr
Match: KAE8650784.1 (hypothetical protein Csa_017608 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50 Identity = 97/106 (91.51%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of MS009787 vs. ExPASy TrEMBL
Match: A0A6J1DIS9 (uncharacterized protein LOC111021468 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021468 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of MS009787 vs. ExPASy TrEMBL
Match: A0A0A0LB75 (GBBH-like_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592140 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 6.8e-51 Identity = 97/107 (90.65%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of MS009787 vs. ExPASy TrEMBL
Match: A0A6J1J9C4 (uncharacterized protein LOC111482460 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482460 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 8.8e-51 Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of MS009787 vs. ExPASy TrEMBL
Match: A0A6J1F9C8 (uncharacterized protein LOC111442002 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442002 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 8.8e-51 Identity = 98/106 (92.45%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of MS009787 vs. ExPASy TrEMBL
Match: A0A1S3BNF3 (uncharacterized protein LOC103491759 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491759 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50 Identity = 99/106 (93.40%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of MS009787 vs. TAIR 10
Match: AT3G27340.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). ) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-46 Identity = 83/104 (79.81%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of MS009787 vs. TAIR 10
Match: AT3G27340.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). ) HSP 1 Score: 161.8 bits (408), Expect = 3.1e-40 Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of MS009787 vs. TAIR 10
Match: AT3G27340.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 4.5e-23 Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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