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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTCGTCAATCTCTTTTTGTTCTTGCTCTGATCTTCACCGCCGTCGTCGGCGCTGTCGCTCAAGCTCCGGCAACCTCCCCCACCGATTCTCCGACACTGATCAGCTCTTCGTCTGGTCCCGCCTCATCTTCTCCTTCTTTGTCGCCGACTGCCTCTTCAGAGGCTTCATCGCAGTCGTCTGTATCAGCGTCTGCTCCGTCGTCGATGGCTCCGATGAGCTCGCTTGGTTCTTACCCCTCCATAGCTTCTTCGCCGACCGGTGAGACTCCGGCCAGTTCTCCTTCTCAGGCTCCGACCGGCTCTCCTTTTGTG mRNA sequence ATGGCTCGTCAATCTCTTTTTGTTCTTGCTCTGATCTTCACCGCCGTCGTCGGCGCTGTCGCTCAAGCTCCGGCAACCTCCCCCACCGATTCTCCGACACTGATCAGCTCTTCGTCTGGTCCCGCCTCATCTTCTCCTTCTTTGTCGCCGACTGCCTCTTCAGAGGCTTCATCGCAGTCGTCTGTATCAGCGTCTGCTCCGTCGTCGATGGCTCCGATGAGCTCGCTTGGTTCTTACCCCTCCATAGCTTCTTCGCCGACCGGTGAGACTCCGGCCAGTTCTCCTTCTCAGGCTCCGACCGGCTCTCCTTTTGTG Coding sequence (CDS) ATGGCTCGTCAATCTCTTTTTGTTCTTGCTCTGATCTTCACCGCCGTCGTCGGCGCTGTCGCTCAAGCTCCGGCAACCTCCCCCACCGATTCTCCGACACTGATCAGCTCTTCGTCTGGTCCCGCCTCATCTTCTCCTTCTTTGTCGCCGACTGCCTCTTCAGAGGCTTCATCGCAGTCGTCTGTATCAGCGTCTGCTCCGTCGTCGATGGCTCCGATGAGCTCGCTTGGTTCTTACCCCTCCATAGCTTCTTCGCCGACCGGTGAGACTCCGGCCAGTTCTCCTTCTCAGGCTCCGACCGGCTCTCCTTTTGTG Protein sequence MARQSLFVLALIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQSSVSASAPSSMAPMSSLGSYPSIASSPTGETPASSPSQAPTGSPFV
Homology
BLAST of MS009783 vs. NCBI nr
Match: XP_022154166.1 (putative protein TPRXL [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 9.5e-36 Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 Query: 1 MARQSLFVLALIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQS 60 MARQSLFVL LIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQS Sbjct: 1 MARQSLFVLGLIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQS 60
Query: 61 SVSASAPSSMAPMSSLGSYPSIASSPTGETPASSPSQAPTGSPFV 106 SVSASAPSSMA MSSLGSYPSIASSPTGETPASSPS+APTGSPFV Sbjct: 61 SVSASAPSSMATMSSLGSYPSIASSPTGETPASSPSKAPTGSPFV 105
BLAST of MS009783 vs. ExPASy TrEMBL
Match: A0A6J1DMX5 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111021481 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.6e-36 Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0 Query: 1 MARQSLFVLALIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQS 60 MARQSLFVL LIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQS Sbjct: 1 MARQSLFVLGLIFTAVVGAVAQAPATSPTDSPTLISSSSGPASSSPSLSPTASSEASSQS 60
Query: 61 SVSASAPSSMAPMSSLGSYPSIASSPTGETPASSPSQAPTGSPFV 106 SVSASAPSSMA MSSLGSYPSIASSPTGETPASSPS+APTGSPFV Sbjct: 61 SVSASAPSSMATMSSLGSYPSIASSPTGETPASSPSKAPTGSPFV 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022154166.1 | 9.5e-36 | 97.14 | putative protein TPRXL [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DMX5 | 4.6e-36 | 97.14 | Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111021481 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 22..105 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 24..105 |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS009783.1 | MS009783.1 | mRNA |
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