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MS009778 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCGCTTCCTCTCTGTCATAAACCAGTGTCCCGTTCTGAACACGCCCACCGACTGGAAAGAGACTCCGGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACTGTGGCGGACCCGTGCTCCAGGTTCATTACTACAAACTCAAAATTTTAATCTGATAGATTACGATATTTTCTGTGGATTACCGATTTTGTACCTAGCGTAATAAATGGTTATTTATATTAATTGATTAAGTTCCACTCAAACTCAAAAAGTTTAAACTAATAAATTATAGTATATTTAATTTTTGTTAAATTATAAATTTGATCATGAATTTCATAATTATATATAATAGGTGTCAAAACTTTTAATCTTTTAATGGTGTCTAATCCACTCTTATATTTATCGATAAACTATTTAAAAAGTGTTTAACAATTTAAAATCTATTAGACATCATTCTAAAAATTTATAGAAGATAGAGAAAACTTATAATTTAAACAATTTACACTCTTAATAATATTTGGACCTTGCTTGTGAACTAAGTAAATAGTAGAGAGGAAATCAAAAGAAACAATGTTCATGGAAATTAAATTTAAACTATAAGTAGAATATGATTTACTAATATCTGTTACATGAGTTTGAATTCACCACCATTTTTATTGTACTTAAAAAAATAACAATAATTAATCTATCTTATTTCTATNNNNNNNNNNNNNAATTAGACAAAAAAAAAAAAAATAGCACAATATTCAATAAGGGATTAGAAAGCACATGGGATAACAAGGTTCCAACATTTAGAATTTGTTTGGCGTGATTTTTCGTTTTACGATTTTAATTTCATTAAGAAATCTAAGACGATTATTTATCTTTGTTATTTCTATTTTTTAAAATTGTATAAAAATTTTGAAACAATGAGTTTCTTGTTTTCCTTTATAATTTTACTTCAAAAGATAAATAAGAATATTGTTTTATTATTCTTGAATTCATAACATAATTGGATCATATATGAACAAAAATATTAAACGAAAATATTCCGGAACGAACTCTAAGCGAAGGAGATAGAGCAAGTATCGGAGACGAGAACGATGAGAGCAGTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAATGCGAAGGGCAGCGAGGTAACGGTAGCGATGGATAACGGAGTGCTAACGGTGACGGTGCCCAAAGGGGAAGTGAAGAAGCCACAGAGGAAGGTGATTGAGATCCAAACA ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCGCTTCCTCTCTGTCATAAACCAGTGTCCCGTTCTGAACACGCCCACCGACTGGAAAGAGACTCCGGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACTATAGAGCAAGTATCGGAGACGAGAACGATGAGAGCAGTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAATGCGAAGGGCAGCGAGGTAACGGTAGCGATGGATAACGGAGTGCTAACGGTGACGGTGCCCAAAGGGGAAGTGAAGAAGCCACAGAGGAAGGTGATTGAGATCCAAACA ATGTCTTCGATTCTCAATATCGCCGGCGCCGGCGAGCTCTTGGACCGCTTCCTCTCTGTCATAAACCAGTGTCCCGTTCTGAACACGCCCACCGACTGGAAAGAGACTCCGGCGGCTCACGTTTTAATCGCCGATCTGCCGGGTCTCAGCAAGGACCAGGTCAAGGTGGCGCTCGCGGACCACTATAGAGCAAGTATCGGAGACGAGAACGATGAGAGCAGTGGAAATAAGTGGTGGCGCATGGAGCGGTGCCGGGGGAAGTTCTGCAGGAGGTTCCGGCTGCCGGAGAATGCGAAGGGCAGCGAGGTAACGGTAGCGATGGATAACGGAGTGCTAACGGTGACGGTGCCCAAAGGGGAAGTGAAGAAGCCACAGAGGAAGGTGATTGAGATCCAAACA MSSILNIAGAGELLDRFLSVINQCPVLNTPTDWKETPAAHVLIADLPGLSKDQVKVALADHYRASIGDENDESSGNKWWRMERCRGKFCRRFRLPENAKGSEVTVAMDNGVLTVTVPKGEVKKPQRKVIEIQT Homology
BLAST of MS009778 vs. NCBI nr
Match: XP_022154167.1 (18.1 kDa class I heat shock protein-like [Momordica charantia]) HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63 Identity = 130/155 (83.87%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of MS009778 vs. NCBI nr
Match: XP_038875560.1 (class I heat shock protein-like [Benincasa hispida]) HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42 Identity = 93/145 (64.14%), Postives = 107/145 (73.79%), Query Frame = 0
BLAST of MS009778 vs. NCBI nr
Match: XP_008450042.1 (PREDICTED: class I heat shock protein-like [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41 Identity = 93/146 (63.70%), Postives = 106/146 (72.60%), Query Frame = 0
BLAST of MS009778 vs. NCBI nr
Match: XP_004145723.1 (class I heat shock protein [Cucumis sativus] >KGN58218.1 hypothetical protein Csa_017596 [Cucumis sativus]) HSP 1 Score: 177.2 bits (448), Expect = 9.5e-41 Identity = 89/137 (64.96%), Postives = 100/137 (72.99%), Query Frame = 0
BLAST of MS009778 vs. NCBI nr
Match: KAA0066962.1 (class I heat shock protein-like [Cucumis melo var. makuwa] >TYK30241.1 class I heat shock protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 176.4 bits (446), Expect = 1.6e-40 Identity = 92/146 (63.01%), Postives = 105/146 (71.92%), Query Frame = 0
BLAST of MS009778 vs. ExPASy Swiss-Prot
Match: P27879 (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26 Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of MS009778 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.4e-26 Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS009778 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26 Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS009778 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26 Identity = 62/108 (57.41%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS009778 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.0e-26 Identity = 62/107 (57.94%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of MS009778 vs. ExPASy TrEMBL
Match: A0A6J1DKY6 (18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111021482 PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.1e-64 Identity = 130/155 (83.87%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of MS009778 vs. ExPASy TrEMBL
Match: A0A1S3BNE8 (class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103491749 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41 Identity = 93/146 (63.70%), Postives = 106/146 (72.60%), Query Frame = 0
BLAST of MS009778 vs. ExPASy TrEMBL
Match: A0A0A0L8Q9 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595190 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.6e-41 Identity = 89/137 (64.96%), Postives = 100/137 (72.99%), Query Frame = 0
BLAST of MS009778 vs. ExPASy TrEMBL
Match: A0A5A7VF09 (Class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00670 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.9e-41 Identity = 92/146 (63.01%), Postives = 105/146 (71.92%), Query Frame = 0
BLAST of MS009778 vs. ExPASy TrEMBL
Match: A0A803QLB8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 4.5e-36 Identity = 81/148 (54.73%), Postives = 101/148 (68.24%), Query Frame = 0
BLAST of MS009778 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 ) HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26 Identity = 61/107 (57.01%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of MS009778 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 112.5 bits (280), Expect = 2.7e-25 Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of MS009778 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24 Identity = 61/123 (49.59%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of MS009778 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 ) HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24 Identity = 55/107 (51.40%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of MS009778 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 99.0 bits (245), Expect = 3.1e-21 Identity = 55/111 (49.55%), Postives = 67/111 (60.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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