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MS009775 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGGATAAAGGCCGTCCCTTGCCGAAATTCGGCGAGTGGGATGTCAACAATCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCACCTGGGAATACAGCAGCAAAAAACAATACCAGACCAGAACAAGATTATGACTATCCCCCAATGGTAACCAACTTACTTTTCCCT CAGGATAAAGGCCGTCCCTTGCCGAAATTCGGCGAGTGGGATGTCAACAATCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCACCTGGGAATACAGCAGCAAAAAACAATACCAGACCAGAACAAGATTATGACTATCCCCCAATGGTAACCAACTTACTTTTCCCT CAGGATAAAGGCCGTCCCTTGCCGAAATTCGGCGAGTGGGATGTCAACAATCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCACCTGGGAATACAGCAGCAAAAAACAATACCAGACCAGAACAAGATTATGACTATCCCCCAATGGTAACCAACTTACTTTTCCCT QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTRPEQDYDYPPMVTNLLFP Homology
BLAST of MS009775 vs. NCBI nr
Match: KAG7017799.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121.3 bits (303), Expect = 3.2e-24 Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of MS009775 vs. NCBI nr
Match: XP_038883812.1 (protein NOI4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MS009775 vs. NCBI nr
Match: XP_038883820.1 (protein NOI4-like isoform X2 [Benincasa hispida]) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MS009775 vs. NCBI nr
Match: KAG6581070.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21 Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of MS009775 vs. NCBI nr
Match: KAA0066959.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK30238.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21 Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MS009775 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.3e-14 Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
BLAST of MS009775 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 2.6e-05 Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of MS009775 vs. ExPASy TrEMBL
Match: A0A5D3E371 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00620 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.1e-22 Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MS009775 vs. ExPASy TrEMBL
Match: A0A0A0LDP9 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595220 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 0
BLAST of MS009775 vs. ExPASy TrEMBL
Match: A0A2P5B5J0 (RIN4, pathogenic type III effector avirulence factor Avr cleavage site OS=Parasponia andersonii OX=3476 GN=PanWU01x14_269930 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17 Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of MS009775 vs. ExPASy TrEMBL
Match: W9S8M1 (AvrRpt-cleavage domain-containing protein OS=Morus notabilis OX=981085 GN=L484_017683 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-17 Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of MS009775 vs. ExPASy TrEMBL
Match: A0A2P5FBR6 (RIN4, pathogenic type III effector avirulence factor Avr cleavage site OS=Trema orientale OX=63057 GN=TorRG33x02_087590 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.3e-17 Identity = 50/68 (73.53%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of MS009775 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 78.2 bits (191), Expect = 2.9e-15 Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 0
BLAST of MS009775 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 78.2 bits (191), Expect = 2.9e-15 Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 0
BLAST of MS009775 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 77.8 bits (190), Expect = 3.8e-15 Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
BLAST of MS009775 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-14 Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0
BLAST of MS009775 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 71.6 bits (174), Expect = 2.7e-13 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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