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MS009772 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGAGAAGGCCGGCAACACGGAATGGTCAGAACCTACCGGATCCTCCCGTCGCCGGTCAACCCACGGCCGGAGAATCGGTTCGTCAACCAGTCCGGTTCACCGCCGCTCACGGCTGGATTGTTCGCTAAAGCCCCAGTCGAGCCGACCAACCACTCGAAGTTCACCGGAAAGTGCAGCCGTCCCCGGTGCTCCGGCTGCCGCATGCATCCGGTTTGCAAAGCCAAGAACAAGACCAAAGGTATATTTAAAGTTAAAGTT ATGAAGAGAGAAGGCCGGCAACACGGAATGGTCAGAACCTACCGGATCCTCCCGTCGCCGGTCAACCCACGGCCGGAGAATCGGTTCGTCAACCAGTCCGGTTCACCGCCGCTCACGGCTGGATTGTTCGCTAAAGCCCCAGTCGAGCCGACCAACCACTCGAAGTTCACCGGAAAGTGCAGCCGTCCCCGGTGCTCCGGCTGCCGCATGCATCCGGTTTGCAAAGCCAAGAACAAGACCAAAGGTATATTTAAAGTTAAAGTT ATGAAGAGAGAAGGCCGGCAACACGGAATGGTCAGAACCTACCGGATCCTCCCGTCGCCGGTCAACCCACGGCCGGAGAATCGGTTCGTCAACCAGTCCGGTTCACCGCCGCTCACGGCTGGATTGTTCGCTAAAGCCCCAGTCGAGCCGACCAACCACTCGAAGTTCACCGGAAAGTGCAGCCGTCCCCGGTGCTCCGGCTGCCGCATGCATCCGGTTTGCAAAGCCAAGAACAAGACCAAAGGTATATTTAAAGTTAAAGTT MKREGRQHGMVRTYRILPSPVNPRPENRFVNQSGSPPLTAGLFAKAPVEPTNHSKFTGKCSRPRCSGCRMHPVCKAKNKTKGIFKVKV Homology
BLAST of MS009772 vs. NCBI nr
Match: PON95242.1 (histone-lysine N-methyltransferase trithorax-like protein [Trema orientale]) HSP 1 Score: 141.4 bits (355), Expect = 3.8e-30 Identity = 64/87 (73.56%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of MS009772 vs. NCBI nr
Match: XP_011655376.1 (uncharacterized protein LOC105435520 [Cucumis sativus] >KGN51328.1 hypothetical protein Csa_008960 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 5.0e-30 Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0
BLAST of MS009772 vs. NCBI nr
Match: TYJ17212.1 (hypothetical protein E1A91_A09G036700v1 [Gossypium mustelinum]) HSP 1 Score: 140.6 bits (353), Expect = 6.5e-30 Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of MS009772 vs. NCBI nr
Match: KAB2064651.1 (hypothetical protein ES319_A09G035000v1 [Gossypium barbadense] >PPS10410.1 hypothetical protein GOBAR_AA10232 [Gossypium barbadense] >TYH01246.1 hypothetical protein ES288_A09G042900v1 [Gossypium darwinii] >TYI08999.1 hypothetical protein ES332_A09G040900v1 [Gossypium tomentosum]) HSP 1 Score: 140.6 bits (353), Expect = 6.5e-30 Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of MS009772 vs. NCBI nr
Match: XP_017609749.1 (PREDICTED: uncharacterized protein LOC108455722 [Gossypium arboreum]) HSP 1 Score: 140.6 bits (353), Expect = 6.5e-30 Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of MS009772 vs. ExPASy TrEMBL
Match: A0A2P5FBR7 (Histone-lysine N-methyltransferase trithorax-like protein OS=Trema orientale OX=63057 GN=TorRG33x02_087640 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.9e-30 Identity = 64/87 (73.56%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of MS009772 vs. ExPASy TrEMBL
Match: A0A0A0KNY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517750 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30 Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0
BLAST of MS009772 vs. ExPASy TrEMBL
Match: A0A2P5Y486 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G035000v1 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30 Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of MS009772 vs. ExPASy TrEMBL
Match: A0A5D2NZ08 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G040900v1 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30 Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of MS009772 vs. ExPASy TrEMBL
Match: A0A6P4LTF8 (uncharacterized protein LOC108455722 OS=Gossypium arboreum OX=29729 GN=LOC108455722 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.2e-30 Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of MS009772 vs. TAIR 10
Match: AT5G40690.1 (CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 119.0 bits (297), Expect = 1.9e-27 Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of MS009772 vs. TAIR 10
Match: AT2G41730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of MS009772 vs. TAIR 10
Match: AT5G24640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09 Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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