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MS009771 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGTGGAATTCAGTTCCGCTGGAGATCGTTTACGAAGTATTAGGATGGAGCTCAATCATATGCTGGGGAGTCGCCGGATATCCACAGGTCATTCTGAATTTCCGGCGAAAAAGGTAAGAAAAAATCTATCGACTCTCGATTCCGGCGGCCGCGCCGTCGTGTTCATCGGCAGGATTATATATTGATGTTCTTTGTTTTTGTTTTTGGTACAGTGTTGTAGGATTCAGCTTCGATTACTTGATTCTGAATTTCACGAAGCAGTCGTCGTATTTGATTTACAACGTTTCTCTGTTCTTCAGCGCCGCCGTTCAGCGCCAGTACTTCGATAAATATGGCTACGATCAGGTAATTTAATTTTTCTTCAAAATTAGTCTCTAATCCTAATTCTAATCCTACCGATTTTTGTTATAGATCTAACCTTTAAAGAGAACAAAAAAGAAAAAGAAAAAAAAAAAAAAAAAAANNNNNNTATCCAACATATTTTATTTTCTTTTTCAATATGGAAACTCTGACGCTGAATATAGTTTTTAAAACAAAAAGAGGAAAAAATACAGAAACATCGTCAAACTGACTCAGCTCTAACTTTTTTTTTTAAATTTATATTTCTTAAATCCTTTATTTATATCGGAGTTACAAACTAAATATTTAATTTAGTCTAAAGTTATATTAATTTATTTATTTATTAATATTTTTTATGAATTTATTTTACAAGTTACATAATTTAGAATACATTATATTTTACAAGATTACAAAAACGAATATCCGAAATGCATGAATCCGAGATCCAATTTAAATATATACTTTTTATCTAAAAATCGTAAATTTAAATCCCAATCTTACTCGTTGATGTACTAAAATGAAGACGGTCAAAAAGTAGAAATCTCCGACAAATAAGGAGGAACACAAAAACTCTAAAAAAGAAAAAAAAAATTGATTTGGATATTTTGTTTTCCAAAAATATGGTGTAAGTTGGTCGTAGGTGCCTCTATCATCGCTGACATTTTGGGCGGCAGTATATTTTTTGACTTTATGCACAAGATTTTTATGGTTTATATACCTTGTTTTGGTTTTGGTATTTTGATTTTGATTTATTTTAGTTTCTGTTTTGAATGATTTTTAATTCATACATTTTCAATTTTTGTTCATTTAATTTTCAAATTTCGAACCATCTATTTTAGTTTCCATACTTTTTAAAAGTGGTTATTTTAGTTCATTTTGACCATTTTGTATCTTATTTATTTTAATCATAAATTTTAACATAACAATTTTCTCGATAAATTTCTTAAAATGTAGGTATAAATTTATATTAAAGAGTTTTTGTTAGTGTATTTGTGTTATAATTTTTCATACAAGAACCAAATATAGTCACATTTTTTAAAATATAGAGACCAAGTCAGAAGTTTTGAAAGTATATGAATCAAAATAAATAAAAATAAAAAATACATTCACTAAAATAGTATTTAAATATTATTTTTATTTGAGAAAACTTTTTAAGTGTCCAATAGTTGTATGGTGCAAATGTTTTTGTTATTAGTACAAACAATGGTGAAAAAAATTTTTAGTACAAATAATGGTGTAAATTTATTTCCTTTTTTAATTCAATTCGGTGGGAATTCTTCGAATTTCTTACCTTCTAGTCGATGATATATGTCTTAATCAATTGAGCTATGTTGAAGATAACCAACAGTATAATTAATACTTTAGTTACACTTTTTCCTAAAAGTGGCTAAGTGAGACTATTTTTGTGTTCGTAGGATCGGATATTTTCACCATTCATATTGGTTTTGGAGTAATTTTTAACTTTTTAATTTAATTTTGAGGAGAGATTAATTGCATATTACATCATAGGATTAGACCTTCAAACCTATAGAAAAGTTTAGCTTTTTTTAGTATAGAATATTACAATGGTGGTTTGGAGTTGTTTGTTTTTCTTTTTTATGTAATTACCACATGAGTGGAGATTTCGACTTTCAAATTTTGAGTCATGTCAAGTTTAATGTGAGAGTATAAATTTAAAACATCGAAGTTAGTTTTACCTTTACTATTAAACTACGTCAAATTGATAGACAGCGTTTGGTATCTTAACCTTTGTTAAGATTACATGTTTAAGTTTTAATAGGACTGATCGAAGTTTTAAAGATTACAAACTTAGTAGTAAAATTTTAAAATTTCTCTTTTTTATTTCTAATATTTTTTAATATTGATTAAATTAATATGCATTCAATATCTATATTACTCACACAAATTTGAAAATCCGACTAAAATGTTCGATGGAGAATGTAAAATGCATTCAAACTCGACAACAAAATCCAGTTAATAAGCATTAAACACGACAAAAATAATCGTACCTTTAAAAATTGTAAAAAAGTTGAGGGTAAATTACCTTTTTAGTCATTGAGATTTGAACACTAAATCGATTTTGTGCGAGACTTCATTGAGAATTTTTAATCCGTTACGGGTAAAATTGAGGATTTAAAAAATATACGACTAAATTTAAAATTACATAAAATAATAGGGACCCTTTTAACTAAATGTAAAATTTTACCTTTTATTACATTTTTTTATTTAGTTAAAATATTATTTGGTTCGTGTACTTGAACTCTGATTTATTTTAGTTTTTGTACTCTCAGAATGTTCATTTTGATCATTGTACTTTATAAAAGTGACCATTTTGATAAATATTTACAAAATTTTAATTGATTTTACATATAATGGAAATCCGTTAATATAAAATCATATTTACATTTAAATAAATATATTGAATATAATATTGTGTTAAAATTATGGTAAGAAAAAATGAGATTAAAAAAAAATTAAGTGACTAAAATGGTTACTTTTTAATAGTACAAGCGATCAAAACAAACATTTTAAAAATAGAAACCACCAAAGTTGAAAATATATGCACCAACATGAACATAAAATACAAAAATTAAAATGAACCAAAACTCAATGTACACAGATGAAATAATATTTTAACCTTTTTATTTGAATTTCCTTTTCAACTCCGAGAGAGAATTTCCATATCCGTTGGCTGCTATTTTTTTACGCTCCATTTGATATTTGGAACGGGTAGGAAATGATTTCAAATTCTAGGATTTCAAATGACGAAGATGATTTCAAATTCCTAATTCCATTTGGAATCAAATTGATTCTAAATCATTGAAATTAAAATTCTTATTTGGATGTTCACCGGAAATGAAAAGAAAACATAAATTAGTAATTTCAACGTTGAAAAACATAAATAATTTAATCAAATAAACCCAAAAAAAAAAAACTACACTTTTATTTTAAAAACTAAATAAAGAAAACTTGCAAAAGTCTTGATTAAAATATTAAAAAAAAAACTTAAAATCAAACTGCTTCAATTTATTCGCAGGAATTTTATTTTTTACTATCATAGTTATTTTATGATATACAAAAAACGAAAGTAATAGAGGAAAAGAAGAAAAATCTATAAAAAAAACGTAAATATATAAAAATTTAAACAAAATTGAAATATAAAGAAAATTAAATACACGAAGAAAAAATTAGAAAATCAACCTTGTTTGAATAGTAATATAAAAAATGTACAGGGAGAACCGGTTTATATTTATTAGAATAAAAAAAAGAGTTACATACAACAAATAAAATTTGAAACTAAGTGTGTCGATCATCACGCAAATAAAAAATGTTAGAGTGGACAAGTATTTTTTTCACCAAAATATGATAAAATAGAAATTTACTGCATTTAAACTTAAAATCTTCACCGATCCAACATAAAATATTTAGGTCAAAATTAACCTGATACAACCATAATTGATATATATCTCCGATAATTAGTATATATCGGATAAGTGAGTTCGATCGAAATGTGGCAATGGATAAGTTTGTTCTTCAGTTCGTTTTTAGTATTTATCATCACGATTAGTCGAAATGTGGCTATGAATTTTTTCGATTTGCATTTTTTTTCCTATTCTCCTTTGTCTGATGCGAACATGTGGTGCCTCCTCGGGAAATTTCAGCGTTATAGCAGTAGAAAATTGAGGGATGATATAATTTTGGTCTTAAGACGCTCAAACTGCTGCTTAATCCCATTTCTTTTCCTTGTTCACAGAATTGGATGCAGAAATTTGTATTTATTGTATACATTTATTGAATCTGAACAGTTTTAATTGACTGTTGCAGATGATACCGGTGGCTTTGAGCGACGTGATTTTCCCCATTCACTCGTTGTTATTGATCTTCGTTTTCTCAGTTCAAATTGCATTTTCTGAAGTCAGTACTTATTTGCTCTTTTAGGGTTCCATCTTGCTTTGGTTTAATTTGGGTAACTATTTGGTATTCTACTGATTGAATTTTGACGCAGCGTGGCAACCAGAAGCTCTCGAAGATAGCCATCGCCATCTTCGCTGGAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATTGCTCTGCCAACCCATTCATGGCTCTGGCTCGTCTCCATCTTCAAGTAACCATTTCCTCTTCCTTTTTAACCTTATGAAGTTATGTTAGTTGATTTGGCCCAACGGATAGTCCAGTCGGCGGAGGCTTGATATCTCTTGGTGATATTGGCTTAGAGGTCTCAAGTTTGAACCTTCTTGGTAAGCTTAATACAAAAAGCTCGATGACTCCCGAGTCTGGACGTTGGGGCGGGCACCGGTGCGGGTGCCCTTGGGTATAGGAGAGCAAAGCTCCGACTTCCAGTTATCAAATAAATAAAAAAATTGTTAGTTGATTTGCTAATAATTCACTAAGGATCATTGTCAATGTGTTGCAGTACAATTCAAGTTTTTATGACAATCATCAAATACTCTCCTCAGGTTAGGCTTTCATTCTAAAGTATTTATTAGTCCTTTTTCATGATTCAACTTGATATCTAAACAAACTCTTTTATTTTTCTTTGCACAATAGATTATGTATAAGAGATTGTTCATTTTTTTCAATTATATTTTCATGTGTGTGGTCTTATAGATGAGATAAGGAAAAGGTAATGGAGAAAAATTGTTAAATCCACAATTTACTTGTTTTCATTTTGTTATTAAATTTCGTTGTATTTGGCATTAAGTTTTTTTATTCTACTCCAGTTTTGCTTAATTTTTTTTGGTAAAAACCAATTGCTTAAGATATTAAAAAATGTTGTAGTACAAGACAGAAGTGTTCTTGTCTGTTAACAAAAAGGCTAAGGGTGAGTTTGGGGTGTCTTAAAACAAATTGCTTTTAAGTTTTAAGTTAAAACACTTCTTCTATGGGTACTTTTGGAAGAAATTCTCATTAAGCGCTCTTCCTAAAAGCTTAAGTTTCATTTTGTGCTTTAGAATTTCACTTTTGATAATCAATAAATTTGGCTTAAGTTTGAAAACTTAAAAGATATAGTCCAACCCCAAGTATGGTAATATTTCATAAAGTTGTGCAGCGTGGTAAGTCATGGAATTACTTGCAATATTGCCTTGTGGAATCCATTTGAGAGTAAAATGAGTTTGTGCACTGACAAAGAACATAGAAGCTAGCATTTCATTTAAGTTCTGTTGTTATTACGTACAGGCATTTATGAACTTCACCCGAAAGAGCACAGTAGGATTCAGCATTGGTAATGTTGTTCTTGACTTCACCGGAGGAGTGGCAAGTTTGGCTCAAATGAGCGTGCAGTCGATTGACCAAGGTCATCTACTCTTTTCTTTACCAAACAAATTCCAAATCCTTCTGTCGCAACTTATGTCTATGGTTAGCTTGGTAACCAGAATCATATTTCTATCACATAATTAGAAAAAATGAAAAGTGATAAAGTGAAAATCTTAATCGTATTGCAAACTACCACCTTGCTAATGATTTTGATATGGTTGTTCACCCTTATGTTGTGATGAATTTACAAGAATAGTTTCATATTTTTTTATGTATAAACGGTAACAGGATAGAAATATTAAGCTCGATGGACTAAATCATTGATACCTGATAATATTATCCTTAATTCCTGGTCTTCTGATTCTTTTCCAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTTGGTATGATCTCTCTCTATCTCAGTAGTTGCAGAAGCTAACTATAGCCCTTAAACTTAGCCTCTAAAGTTAGGCAAAAACTTGAGGTCTCTTGGTCATACTAATTTAGAGGTCTCAAGTTCGAACCTTCTAGAGAGTTTAATACCAAAAAAATCTTGATGTCTCCCAGGTCCGGGGCTTGGGTGGGTGTGGATGCCCTTGAGTATAGGGGGAGCAAAGCTCCAAGTCCCAGTTATAAGGAAGAAAAAAAAAAAAAGAAAAAAAAACTATAGCATCCAAACATTTCTGAGTAATTCGAGTTTGCACTATTTGCTCACTGCATTTATACTGTGTTGCAGATCTCTATAATGTTTGATCTGATTTTCTTCTATCAACATTTTGTACTATATCATACCAAGGCATCAAGGATTTCATTTCAACTTGATCCTGAAAGCACTGAGCCATTGGTTAAGGACTCTGATCACTTGAAGGGGTTGCCACAGCCAGTT ATGGCTTCGTGGAATTCAGTTCCGCTGGAGATCGTTTACGAAGTATTAGGATGGAGCTCAATCATATGCTGGGGAGTCGCCGGATATCCACAGGTCATTCTGAATTTCCGGCGAAAAAGTGTTGTAGGATTCAGCTTCGATTACTTGATTCTGAATTTCACGAAGCAGTCGTCGTATTTGATTTACAACGTTTCTCTGTTCTTCAGCGCCGCCGTTCAGCGCCAGTACTTCGATAAATATGGCTACGATCAGATGATACCGGTGGCTTTGAGCGACGTGATTTTCCCCATTCACTCGTTGTTATTGATCTTCGTTTTCTCAGTTCAAATTGCATTTTCTGAACGTGGCAACCAGAAGCTCTCGAAGATAGCCATCGCCATCTTCGCTGGAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATTGCTCTGCCAACCCATTCATGGCTCTGGCTCGTCTCCATCTTCAATACAATTCAAGTTTTTATGACAATCATCAAATACTCTCCTCAGGCATTTATGAACTTCACCCGAAAGAGCACAGTAGGATTCAGCATTGGTAATGTTGTTCTTGACTTCACCGGAGGAGTGGCAAGTTTGGCTCAAATGAGCGTGCAGTCGATTGACCAAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTTGATCTCTATAATGTTTGATCTGATTTTCTTCTATCAACATTTTGTACTATATCATACCAAGGCATCAAGGATTTCATTTCAACTTGATCCTGAAAGCACTGAGCCATTGGTTAAGGACTCTGATCACTTGAAGGGGTTGCCACAGCCAGTT ATGGCTTCGTGGAATTCAGTTCCGCTGGAGATCGTTTACGAAGTATTAGGATGGAGCTCAATCATATGCTGGGGAGTCGCCGGATATCCACAGGTCATTCTGAATTTCCGGCGAAAAAGTGTTGTAGGATTCAGCTTCGATTACTTGATTCTGAATTTCACGAAGCAGTCGTCGTATTTGATTTACAACGTTTCTCTGTTCTTCAGCGCCGCCGTTCAGCGCCAGTACTTCGATAAATATGGCTACGATCAGATGATACCGGTGGCTTTGAGCGACGTGATTTTCCCCATTCACTCGTTGTTATTGATCTTCGTTTTCTCAGTTCAAATTGCATTTTCTGAACGTGGCAACCAGAAGCTCTCGAAGATAGCCATCGCCATCTTCGCTGGAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATTGCTCTGCCAACCCATTCATGGCTCTGGCTCGTCTCCATCTTCAATACAATTCAAGTTTTTATGACAATCATCAAATACTCTCCTCAGGCATTTATGAACTTCACCCGAAAGAGCACAGTAGGATTCAGCATTGGTAATGTTGTTCTTGACTTCACCGGAGGAGTGGCAAGTTTGGCTCAAATGAGCGTGCAGTCGATTGACCAAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTTGATCTCTATAATGTTTGATCTGATTTTCTTCTATCAACATTTTGTACTATATCATACCAAGGCATCAAGGATTTCATTTCAACTTGATCCTGAAAGCACTGAGCCATTGGTTAAGGACTCTGATCACTTGAAGGGGTTGCCACAGCCAGTT MASWNSVPLEIVYEVLGWSSIICWGVAGYPQVILNFRRKSVVGFSFDYLILNFTKQSSYLIYNVSLFFSAAVQRQYFDKYGYDQMIPVALSDVIFPIHSLLLIFVFSVQIAFSERGNQKLSKIAIAIFAGVWFFAAACFFIALPTHSWLWLVSIFNTIQVFMTIIKYSPQAFMNFTRKSTVGFSIGNVVLDFTGGVASLAQMSVQSIDQGSWVNFFGNIGKPLLALISIMFDLIFFYQHFVLYHTKASRISFQLDPESTEPLVKDSDHLKGLPQPV Homology
BLAST of MS009771 vs. NCBI nr
Match: XP_022154196.1 (cystinosin homolog [Momordica charantia]) HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150 Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of MS009771 vs. NCBI nr
Match: XP_038884260.1 (cystinosin homolog isoform X3 [Benincasa hispida]) HSP 1 Score: 466.1 bits (1198), Expect = 2.1e-127 Identity = 226/272 (83.09%), Postives = 249/272 (91.54%), Query Frame = 0
BLAST of MS009771 vs. NCBI nr
Match: XP_004145688.1 (cystinosin homolog isoform X2 [Cucumis sativus] >KGN58224.1 hypothetical protein Csa_017462 [Cucumis sativus]) HSP 1 Score: 454.5 bits (1168), Expect = 6.4e-124 Identity = 221/274 (80.66%), Postives = 247/274 (90.15%), Query Frame = 0
BLAST of MS009771 vs. NCBI nr
Match: XP_038880439.1 (cystinosin homolog [Benincasa hispida]) HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122 Identity = 216/279 (77.42%), Postives = 247/279 (88.53%), Query Frame = 0
BLAST of MS009771 vs. NCBI nr
Match: XP_038884230.1 (cystinosin homolog isoform X1 [Benincasa hispida] >XP_038884243.1 cystinosin homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122 Identity = 226/302 (74.83%), Postives = 249/302 (82.45%), Query Frame = 0
BLAST of MS009771 vs. ExPASy Swiss-Prot
Match: P57758 (Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.8e-92 Identity = 167/268 (62.31%), Postives = 210/268 (78.36%), Query Frame = 0
BLAST of MS009771 vs. ExPASy Swiss-Prot
Match: Q54WT7 (Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 7.5e-51 Identity = 102/242 (42.15%), Postives = 152/242 (62.81%), Query Frame = 0
BLAST of MS009771 vs. ExPASy Swiss-Prot
Match: A7MB63 (Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 3.9e-47 Identity = 103/239 (43.10%), Postives = 152/239 (63.60%), Query Frame = 0
BLAST of MS009771 vs. ExPASy Swiss-Prot
Match: O60931 (Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2) HSP 1 Score: 187.2 bits (474), Expect = 2.5e-46 Identity = 100/242 (41.32%), Postives = 151/242 (62.40%), Query Frame = 0
BLAST of MS009771 vs. ExPASy Swiss-Prot
Match: P57757 (Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 3.1e-44 Identity = 98/239 (41.00%), Postives = 145/239 (60.67%), Query Frame = 0
BLAST of MS009771 vs. ExPASy TrEMBL
Match: A0A6J1DN06 (cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150 Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of MS009771 vs. ExPASy TrEMBL
Match: A0A0A0LB92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 3.1e-124 Identity = 221/274 (80.66%), Postives = 247/274 (90.15%), Query Frame = 0
BLAST of MS009771 vs. ExPASy TrEMBL
Match: A0A6J1EJ63 (cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 5.7e-118 Identity = 211/272 (77.57%), Postives = 243/272 (89.34%), Query Frame = 0
BLAST of MS009771 vs. ExPASy TrEMBL
Match: A0A5D3E357 (Cystinosin-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00520 PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 4.8e-117 Identity = 209/279 (74.91%), Postives = 241/279 (86.38%), Query Frame = 0
BLAST of MS009771 vs. ExPASy TrEMBL
Match: A0A1S3BP09 (cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491741 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.8e-116 Identity = 207/279 (74.19%), Postives = 240/279 (86.02%), Query Frame = 0
BLAST of MS009771 vs. TAIR 10
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein ) HSP 1 Score: 340.5 bits (872), Expect = 1.3e-93 Identity = 167/268 (62.31%), Postives = 210/268 (78.36%), Query Frame = 0
BLAST of MS009771 vs. TAIR 10
Match: AT4G36850.1 (PQ-loop repeat family protein / transmembrane family protein ) HSP 1 Score: 44.3 bits (103), Expect = 1.9e-04 Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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