MS009668 (gene) Bitter gourd (TR) v1

Overview
NameMS009668
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpre-mRNA-processing protein 40C
Locationscaffold813: 3109584 .. 3120344 (+)
RNA-Seq ExpressionMS009668
SyntenyMS009668
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCAGCATCAACTGCCTCTCAATCCCTTTCATTACCCGCTCCGCCTACTTCCAACTCTGCAGCCAATGGATCTTCAATTCCCAATTTGATCCCCGCAACTTCACCAGTTCCTCCTGCCCCTTCTTTACATATTCATCAACTAGTGCCTGGAACTCCGATGATACCTGGTCCACCGGGAATGTCACCATCTATTCCGGTAGTGTCGACAAGTCCAGCAACTATGTTTTCACCCAGTGATTCATCTGGTTCCACTATCTCAGGACCCAATATGCATCCAACTCCCAACTCAATAAATACTTCCGTTCGTCCTCAAATATGTGGTTCGTATCCTTTAACTCATGTTGTTTCCCCACCCCACGCAATATGGTTTCAGCCTCCTCAGATGGGAGGTATGCCCAGGCCTCCCTTTCTGCCATATTCTGCTTCTTTTCACGGCCCTCTTCCTTTTCCTGCTCGTGGAATGCCCCTTCCATCTGTCCCATTGCCCGATCCTCAACCTCCTGGTGTTACCCCTGTTCAAGTTGCGTCAGCAATTACTGTGTCATCTGGTCATGGCAATCAGCTTACTGGAAATTCGGTGATCCAGATGGACTTAAATCATTCTGGACTTGGTATGATATGTGTTGTTAAATTACTATCTTTCTGACATGGTAAGCCTATTAGCACTCTGGTTCCTACGAACCTAAACTTCTGTTCTTCGTTCATTGTTTGATCATTTCACAGATGGCCAGAAATACGCTCAAGGTGTGGTTCATTCTGAGAGCAACTCTTTAATCAAGCGCCTAGATGATTGGACTGCCCACAAGACTGAGGCTGGAATAATCTATTACTATAATGCTTTGACAGGAGAATCTACTTACGAAAAGCCTTCTGGATTTACAGGGGAGGTATTTTCCGAAAGTTTTATATAGTTTCCGTTGCGGATAAGTTTCTATTGGTCTATAGGCTGATTTTAGCATAAAGCTCTCCCTCTTTCTCTCTTCCCCATTTCCCCCTCCCTGTTTGCGTCACACCATCTGAATTTTTTTTGTTATTCTGGTTGCATTAGCTTCATGGCTAATTCTATTTCAGCACGAAGCTTTTGTGGAATACGGGCAGATGAGTAATTATCTGAAATGACCATTGTTGACATCATGGTTTACTATTGAACTTTATGATGCTTTTCTTTATCGTAATGGCATGACTGTATCCTGTCTTCTTTATCCGTTTCTTTGGCATTGAAGTGTTGCAATTTTCCAATATTGGTGCATCTCATTCAATAATACGTACTTTTTTTTGTGTGATTGAATGTGTTGCAGCCTGATAATCTTGCGGTGCAGCCAACATCAGTTTCGATGTAAGCTCTTTTTAGCTTTATTAACCATGATGCACATGAAATTTCTTCCTTTTCATATGAAAGAAATTTTTAAATCTCATTTCTTAGTTCCATAACAGCTGTATTTTGATTTTGGCCATGCATTGAAAATTTTTATGTTGTAATATGACTGTTATTTACTGAGTTGCAATATTACTAGCATTTTGTTGAAGATTTTGTTTTTTTATGAAAAACCATAGGAAAGGACATAAAACGAACAATACAAAAGACCAGCCCAAACTAAAAGAAGCAAAAAAAAAAAAAATCAAACTAAAAGAAAGGGCTCGGACTCTTAAGAATAAGAACCAAAGGATAAATACAAAACTCTTTAGTCACGACACCTAGAGGGAGATATTGAACGTAGCTGTAGATCAAACCTCTCCCAAGACGACTCCCATCCCCTAAAGATCCTCTTCTTTATCTCAAGCTAGACATTCTACAAAATGGACAAAAAGCTAGTTTTACAGAACACTTCTTCATTGTCTCTAAGTGGCTGATGGAACAGCACCTCCTTTGCCATCAAATGACACAAACTATTACAGATTAGGGAAGTACTGAAATACACCATAAACCGTCCTACATCAAGCAAGCAAGCTGCATCTCCAAAACACATGATCCAAACTCTAGGAGGCACCTTTACACATAACACATGACTTTTGCCCAAACCATATGGAAGAAGCTCTTTCCATCAAACTGATAATGTAATCTTCCCATGCATGAGCTGCCAAGCAAATAATAGAGCCACACAAATGAGAAAAGAACGAGCTATAGGAAAAACTATATAAAGGGTTGCATTACCCCGAAAAAGAGGGAGACCGTATGGAATTTTTCTTGTTTGAAATAGGTATCTAGAGCTTGTTTATTACCCCGAAAACAAAAAATTATAGAAATGCCGGGGAGAATATAAACCATCTGTTTATTCATTGCTTTTCCTACAATACTTGTTTTTTTTTTTGATAATTGGGATTCGGAGCTTTGCTCTCCTATACCCGGGGGCATCCGTGCCCGCCCTAAGGCCCACATCAAAGTTTTTTGTATAGGACTTGAGAACTCTAAGCCGGTATGGCCAAGAGACCCCAAGCCATTATCAACCGGGCCACTCCTTGGGGGTTGCTTTGCCTAGAAAGGTTAAAACCACTTGATATTGTTGGGTATTTATAGGTGTTGTCCTTGGAATATTAGTATCAATAGTTTTTTGATAATCAACAATATACATCTCTGCAGTAGGTGCGTTTCCCTTCATTTATACTAGTTCATCCTCTTGGCATTGGCATAATTTTTGGGCTTTGTTTCTTCCTAGTTGTTGGTTTTTAGTAGGCCCAACAAAGATTACCTTTTCCTCGAACTTTGTGACTCATGGCTACACATCTTAGTTATTAGAACGTGATTAATAGTGATTTTCTAACGACCGATGAATGTGATTGTGTTCTATTGTCTGTAGGTCGAACTTGTCCGGTACAGATTGGGTTTTGGTCAGTATGAGTGATGGTAAAAAGTATTACTACAACAATAAGACGAAGGTACTGCTCCTTGTTTTCTTGTATTTTTTTCTTTTAAATACCTTTTCCCCATTATGATAGGGAACAAGGCTTTGTATATAAAATAAAGTATTCGAAAAAGAGGGAGACTGTATGGAATTTTTCTTGTTTGAAATAGGTATCTAGAGCTTGTTCCTGTTCATAACAACTTGTATATATGAGAAAATAGTCCACTGCAGTTAGTTCTTAAAAGTTAAAAGCTTTTCTATATGTTGAAGGACCGGCAACTTTCAATTATTTTCTTGTGTTAGCGGTCTTTTAGACATAACTAGCCTATTATGCTTCTTTTTTGTGTCTGTGTTTGATTTTATATGTATAGAATTGATGATGCTATTCCATTAAAAACATAGAAAATAACATGTATAATTTCCACGAAGTAACTAGAAAAGAAGCTACAATGTATCTGCTGTCATATACTATATGAGGTAGGCAGTGGCTGAAAATTGGATTTATTTCTTAGAAAAGGCGTCTCCATCCAGATGGTTCATGTATCATTAGACATATGTTCTTTAAACTCATTGGATGAAGAACATGATCCTCAAAATCATATTTCTGCATTCTGTCCTTTACTTTAGAATGTTGTTATGAAACGTATGGCTCTTGTAGTAATTTATATTAATAGTAAGTTTTAGCCATGAAATTTTAACCTTTTATTGGTGCCAACTTGATTCTCTCTCTGTCTCCATCCAGATGGTTCATGTATCATTAGACATATGTTCTTTAAACTCATTGGATGAAGAACATGATCCTCAAAATCATATTTCTGCATCTTTACTTTAGAATGTTGTTATGAAACGTATGGCTCTTGTAGTAATTTATATTAATAGTAAGTTTTAGCCATGAAATTTTAGCCTTTTATTGGTGCCAACTTGACTCTCTCTCTCTCTCCCTCTTGAAATCAGATTAGCAGTTGGCAGATCCCAAATGAAGTGACTGAATCGAGGCAGCAGAATGATGAAAAAACGAAGGAACGTTCAGCTCCTGTGCCAAATAGTAATGCATTAACTGAACAAGGATCTTCGCCTATCAGTATCAGCACTCCTGCCATTAACACGGGTGGTCGTGAAGCCATACCCCTTAGAACGGTAGGAATATCAGCGTCATCATCTGCCCTGGATTTGATCAAGAAAAAATTACAAGATTCTGGAACTCCTGTAGCTGCCTCGCCTGTTTCAGCACCAACAATAGCCCAATCAGATGTAAATCTGCCGAGAGAGGCTGATGCTGCAGTTAAGGGACTGCAGAGTGAGAACAGCAAGGATAAGCCAAAAGATGCTAATGGTGATGGAAATGTATCGGACACCTCCTCAGACTCCGAAGATGTAGACAGTGGGCCAACTAATGAGCAGTTAATTATCCAATTTAAGGTATCATCTTACTTCCCCTTGATTGCAGATCAACATAATAATCTGATGCATTTTGTCCTTCCTTTTCCTCCTGCCTTAAACATTTGACAGTTCGATACTAGACGAAGCTTTGTCTTTTTTGCTAATCTTTTTTGTTGCTAGTATCTGGAATATCAAGTTCATTCTAATTTGGATTGGGTCCCTTCATGTAGGTGGTTTTCCTTTTGGTGGGCTTGTTTTTTTATGCCCCTTGTATATTTATTCTTTCATGTTTCTCAATGAAAACTCGGTTTATTATAAAAGAAATCTGTGTCTTTTTCCTGCATCTTGATCTTGGGTGTGCTTGAGCCTCTGTGTTGTAGATGCATTAATTTCACACCCATTATGAAAGTCAGCCAAGCTTGCTGCTCCATTCATGGAGCAAGTTGAAAAAGAGTTAGGGAACTTAAGCTGCTTCCCTTCATCAGGCCAACATTTAGTGAATGGAAAGCAGGTCTGGTTGTTGGCCTATCAGTGTAGTCACGTCATATTTCTAATAATTGATCATGGTCTTTATTTATATTTACTTCTTGTTACTATCATTCCTGAAGTTGCCATCATAAGTTTCCGGCCATATTATCTTAAGTTTAAGGAACTTCTATCCTCTGCAATCTCAACTGATCTGGTGGAAAGTGCTCATTATGTTGTATGTAATTGTAGGAGATGCTTAAGGAGCGGGGAGTGGCACCATTCTCTAAATGGGACAAGGAATTGCCGAAGATAGTGTTTGATCCCCGTTTTAAGGTTTGTTGAGTATAAAGATTTGAATTACTTTGTTCGGGAATAAGGGGCTCCTACCAATGGTACCCCTTGATACAGGTTTGTTTGATTTTGTTTGTCTATGTTAGACTACTTTCATACATTTGAATTCTTGGTTGACACATGATTTTCTTTTGTTATGGCCTCTAACAAGTTTGTTCATCTGTAGTCCTTCTCATTATAATACCAGTAACTTTCTATTTTTTCAAATAGACTTGCATCTATCTACCTATGTAACATTTTCTTGTCTGTTCTTTTCTTTTCTTTTCTGACTTTGATCTTTGTGGTTATATTGTTTTGGGATATTCCTTTTTCTTAGAACCAGAACGTGGTTTTGGTTTTACTTCTTTCTTTAGAGTTAGGGTGCAGAATGATTAATTGATAGTTTATTACTAGAAACCTTTATTTTTTTTAAATATAAAGAACACTATGTTTGTGTTTTGCCCTTTATGTGCTGGATTACTGTTTGTTATTTGTTATGAAAAGTATCATTTAATGACAGGCTATTCCAAGTTATTCAGCTAGGAGGTCCCTGTTTGAACACTATGTTAAGACCCGTGCCGAGGAGGAACGGAAGGAAAAAAGAGCTGCTCAAAAGGCTGCAATAGAGGGATTTAAGCAGTTACTGGATAGCGCATCTGAGGTTTTATCTCTTTCCACATTGATTATTTTGTCTTAGGTTGCTATATTTGTTATCATTGAGCCTTTTGAATCAAATAAGATGGACGAGTTCATAACCTAGGTGAAATATGATACTTGTTACACATTTTTTTTTCTTTAACATAAATTGTTTCTCTCTCTAATCAGAATTACAAATACCTCAAAATAGGGTCAAGCATGTCCTAAAATTTTAACTTGGTTCCCACAGAAAGATTGGGGATTTTGGGTATCAATATAGAATATAGACATTGTGCTAATCATGGTGGCCACCTATCTAGGATTTAATATCCTACAAGTTATCTTGTCAACCAAATGTAATAGGGTCAGGCGGTTGGCCCGTGGTGGGTATAAACGAGGCTTTTGTTGCTGACTACTTTGCACTTGTTTTATTTTTATTTTCAGGATATTGATCAATCAACCAGTTATCAAACATTCAAAAAGAAATGGGGCAATGACCCACGGTTTGAAGCTTTGGATCGCAAAGATCGGGAGAATTTATTGAATGAAAGGTGCCATTTAATGTGTAATAGTATGAACTTTTTTTCTCAATCTCGGTACATTTATAACTCTGTTTTATGCTTTCGTGTTGATTTTTCAATTTCATAATTATCTCGTCTAATTGGCAAAGTAAATCAATATGATTATCATAGCAATTTTCCTGTCTGGTAAAAATGACTTTTTCAGGTGGTATTAATTATTATGATGCCAAGGTTGACTAAGGTGCATTTCAAACCATTATGTGTTAGCCAATCATCTCCCGTATGTTGCCCATAGAATTTTCTAGGAATTTCTTTTTTGAATTTATTCATTTACTAATTGTTTGCCGTGAGGTTTTCTACCATTGGGAATGGGTATCCTGTAATATTAATTTATTGGTTAAAATACACATTTTATCCGTGAACACTGATTTAGTCCTTGAACTTTCAATAGTAACGATTTAGTCCCAGTACTTTAAACTTGGTTACAATTTAGTCCCTACTGTTAAAAATTAGGTTAGATTTAAAAGAAAGCTAACGTGGCTAATCTATGTATACAAATTAAATGGCCAGCTGTGCAAGTTGGTTCAATCTCGGGTCGGTTCAAACTTCAACCGGTTTACGATTAAAAAAAGAGGAGAATAATTCTAAAGAGGAAAACACCACCCCACCTTAATGTCGTTGTCTCCTCCGTCTCGTACAGCATCTCCGCCTTCTTCTTGTTCTTCTTCTCCACCTCTTTCAATCCTCCTATTTCAGCAGATCCTCAAACACCCATCCACACATATAGATCCCAAACAGGGAGGGGTGTTGTACAGTGAATTGTTTTTATGGTGGATCTTGTACTCCAACACCACAAGAGTCACCTATTGGGCTGCGTCGAGCATATCCTTCCTGATGATAACAATGGTGAAACTAGATGTCCCCACGTTCTTCTATGCTCTCGCATAAATCACCCCAACTTTAGATATGTTCACAGGTTCGAGTAGAAATTGGACGACATGTCGGCCACCAAGAGGCTATTCGAATATGGATAGTTCTTGAATTCAACTCCATGGATGGTCTCGTTCGCTCAGATGTGTAGATATTTGGCATTGGGGGCTTTGTTCCAGGTCCTCGAAGGCGGGGGTTTTGGTGCATTTTTTAGCTTTCCAGACCAAATTACCTTTGACTTGCATAATTTATGAGCCTCCTTGAACGCCTTGTTGCCCCATGGGCCGATGACGACGGTGTCCTCAGGCTTGCACAGATTCAAAGGAATTCCGGCGAATTGAGTGGAATGGTGTAATCTGCCAGAACATCGAGGAGGCTTCAGAGACCTGCCTCAGCCTTTTAGATTATGGAGGTGAAATATTTGCCTTTGTGGCTCGTCTCCATTACGCTTATGCCAGATCTGCACCTGTTGTATAGCTACGACATGGTCGCCAACCTGAGGGCAAAGTTGAACACTCGATCATCGGATTGATTGTGGGCCGGTCAAGATTGAGATGCGCTTTGTACATGGCGAAGGAAGAGGGATAATTTTTTCCATCTCCGGTCCTGTAGGTGACGGCGTCGGACGGTGGAGTAGGCTTGGACAACTCAGATGGCAGCGATGGTGGTGGGAAGGCTTTGAAAGAGTCGCGAAAGGTGGGGTGGTGTTTTTCTCTTTATATATTTTTTTAGAAATCTTATATCGATTCAAATTTGAACCGACCCGCACAGTTGGCCATTTAATTTATACATATAGATCAGCCACGTTAGCTTTGGTTAAATCTAACCTTATTTTAAACGGTTGGGACTAAATTGTAACCAATCTTAAAGTACAGGAACTAAATTGTAACTTTTGAAAGTTTAGAGACTAAATCGTTTATTTTAATGAAAGTTCAGGGACCAAATGTGTTTTTTAACCTAATTTATTCATTAATTCATGGTTTGTCTGCTTTTAAGCTTGGGATTGCAAGACCTAGGGTCGTTTCATAACTCTCTCTCAAGGGTTTATGAAATCTTCCAAATCTACAATTTTCCTTATTTCGCATGGGGATGAATGAGAAAGGAAGGGGTAAAGGGAGTACTAAATTATTTTTAATTTTGATTGTCTACGTAGTTCTTAATTTTATCAATTCCTTACTCTTAATTTTGGTCAGTTACTTTTTTTTACTATTAAAATAAATTAACTAAATATTAGTTTGATCAATTTAAAATTCTTCATTATAATTACTTGATTAAAATAATCTATTACATGTAATTTTGGTTAACTTCATTTTTTAATATTGCAGTTATATAAATATTAATTAATTAGTTCATTGACTAATATATTTTACTTAATTTTAATTAATTAATTAATATTAGAACTAACTGGTCTACTCTACTTGATTTCAAATTCCTTTAGTACTAATTGATTGATTTAAAATTTTATTTTTGTTCATATATTTGTTAGCATTGTCTATTTTATTGATTTATATAATCAATGAAATTTCTATAGAGAAACTAATGCAAAATTTTATACAGACATCTTAATCCTAGACATCTTGTTGCCGAACATCTTGTTCCCATTCAATTTTTGAAATAAATGCCTTAAATTGCAACTTGCACGGTTATTTGATCAATCTGAGATATTTTTTCTTGAACTTTTTGTGTGATTTCTATATCTTCCCCTTCCAATTAACAACTTTTTTTCAATTAACAACTTTGGCCTCCTAGTTATGATGGTGAGAATGGTAGTTTATGTTTATCATACATATTTAAAATCGTATAATCAGGCTTTCAGATACTAAAAAGGTTTGGCTCGTCTTAAAATAAGTTCACTGTGTTAACTTTTGTGAAAGACCTATACTTAACATGCCTCTTATTCAATTTACTCAAGTTTGACTGTGAATTTTAATTATCTGTTTTCTGCAAATTGGAGCTTTAGCCGTTCTACATATTGTATTAGGAGACTTTATTTACCCCCGACATCGCCAGTTACTCTTCTTGGTATGCCTTATGATCATGTCTTTTGGAATTTAAAAATTTGGTTGCGTCATTCCTTTGATATGTCTGCCCTCTTTGATATGGTTTTACACTAGGTGGATACTTATTCAAATGTAATATCAACTGTTTTGTACACAGAAAGTGCTTACTATTGATAACCCCTGAAAAAGCAACTTGAGTCAACAAGGTAGTAGGCTAGTAACCAGAATCTCATATTTATATTTGATGTGTCTTTTAACTAAAATCTATTATGTTGGCTTTTAGTTAGATGATACCTCAATTTAACTTGTAGGGTTATTTGTCTGAAGAAGGCTGCCGTTGAAAAGGCTCAAGCCTTATGGGCTGCTTCCACCACTAGTTTCAAGTCCATGCTGAGGGAGAGAGGAGATATCAATGTCAATTCCCGTTGGTTGAGGGTGGGTGCACCATGCTCTCACTAATTGGTAGTTCATGTTCTGATGAGTATCTGAATGTCTATTTTCCTGCATGCTAATGGTTTTTTTCCTTTTAATAAAAGTAAAATTTTGTTGGAGACATGTGGCTAAATAATGTTAGTTAAGAAGGCAGATTATAGTATTCTCTTAATATTTTACATCTGAAATATCGTTTAGAGTAAGAGTCTGTTTGATATGCAATTTGGATTCAGTTTCTTGTTTTCAAGATTCACTGAATTTAGCGAATTCAGTGAATATATGTTTGACACATTTGTTTTTTAAAACTGTTTCGGATTCTGTAATCCAAATAGTAGAATTCTGAAAACAACATAAAATTATTTTAAGTGGTTTTAGATTTTGAATTTGAAATTTTAAAATGCAAAAAGTTACATTAAAAAGACAAAAAAAAGAAAAAAAACTTTGATAAATATACTATTTCATGTTATAAACTAATTTTATTTTTGTTAAAATTAAAAAATGTAAAATAGAATATATTCTAAAATTAGCTCTTGGGTGTAAATGTTTTTATCCCCCTTCAGTAGCTACTCTCAAAGTGCCTTGCTTCTAATTGGAAGTCTTTTTTGTAATTAGCCACTATAGCTTTTCAGATATTTCATACCATCAATGAAATACATGTTTCTTACCCAAAAAACCCTATAAGTTTGTCCTCTTTTTTCCTTTTCTTTTAAGTTATTGCTCATGTTTTCTGATTGTTTTTGTATTGGTTCACTGTTTTTAAATAGTGAGCAGAGGTTGTTGGAGAGAACGAATATGATGCATTCATAGAATGAAAATTTTCATCTATGCTGCGCCAGTTTCAGGTCTCATAAACTTGATGAAAGATTATATGTAATTAGATTCAATCTGTCACATCAACCCAAGGCACAATCATTTAAAATTTAGATCTATATCTGCACTTATAATGTGAAATTATACGACTCAACTAATAGTTAATATGCAACGTTATTATGAACATGCGTCTGTAAGGCTGTAACCGTTTCTTACTACCCCTGTTTTGATGCTTTAGGTAAAAGATAGCCTACGGGATGATCCAAGATACAGATCTGTCAAGCATGAGGAGCGTGAGATGTTATTCAATGAGTACATATTTGAACTTAAGGCTGTTGAAGAGGAAAAACAACGTGAATCAAAAACTAGAAAGGAGGAGCAGGTATGTAAACTTGAATTCCCAACCTTT

mRNA sequence

ATGTCATCAGCATCAACTGCCTCTCAATCCCTTTCATTACCCGCTCCGCCTACTTCCAACTCTGCAGCCAATGGATCTTCAATTCCCAATTTGATCCCCGCAACTTCACCAGTTCCTCCTGCCCCTTCTTTACATATTCATCAACTAGTGCCTGGAACTCCGATGATACCTGGTCCACCGGGAATGTCACCATCTATTCCGGTAGTGTCGACAAGTCCAGCAACTATGTTTTCACCCAGTGATTCATCTGGTTCCACTATCTCAGGACCCAATATGCATCCAACTCCCAACTCAATAAATACTTCCGTTCGTCCTCAAATATGTGGTTCGTATCCTTTAACTCATGTTGTTTCCCCACCCCACGCAATATGGTTTCAGCCTCCTCAGATGGGAGGTATGCCCAGGCCTCCCTTTCTGCCATATTCTGCTTCTTTTCACGGCCCTCTTCCTTTTCCTGCTCGTGGAATGCCCCTTCCATCTGTCCCATTGCCCGATCCTCAACCTCCTGGTGTTACCCCTGTTCAAGTTGCGTCAGCAATTACTGTGTCATCTGGTCATGGCAATCAGCTTACTGGAAATTCGGTGATCCAGATGGACTTAAATCATTCTGGACTTGATGGCCAGAAATACGCTCAAGGTGTGGTTCATTCTGAGAGCAACTCTTTAATCAAGCGCCTAGATGATTGGACTGCCCACAAGACTGAGGCTGGAATAATCTATTACTATAATGCTTTGACAGGAGAATCTACTTACGAAAAGCCTTCTGGATTTACAGGGGAGCCTGATAATCTTGCGGTGCAGCCAACATCAGTTTCGATGTCGAACTTGTCCGGTACAGATTGGGTTTTGGTCAGTATGAGTGATGGTAAAAAGTATTACTACAACAATAAGACGAAGATTAGCAGTTGGCAGATCCCAAATGAAGTGACTGAATCGAGGCAGCAGAATGATGAAAAAACGAAGGAACGTTCAGCTCCTGTGCCAAATAGTAATGCATTAACTGAACAAGGATCTTCGCCTATCAGTATCAGCACTCCTGCCATTAACACGGGTGGTCGTGAAGCCATACCCCTTAGAACGGTAGGAATATCAGCGTCATCATCTGCCCTGGATTTGATCAAGAAAAAATTACAAGATTCTGGAACTCCTGTAGCTGCCTCGCCTGTTTCAGCACCAACAATAGCCCAATCAGATGTAAATCTGCCGAGAGAGGCTGATGCTGCAGTTAAGGGACTGCAGAGTGAGAACAGCAAGGATAAGCCAAAAGATGCTAATGGTGATGGAAATGTATCGGACACCTCCTCAGACTCCGAAGATGTAGACAGTGGGCCAACTAATGAGCAGTTAATTATCCAATTTAAGGAGATGCTTAAGGAGCGGGGAGTGGCACCATTCTCTAAATGGGACAAGGAATTGCCGAAGATAGTGTTTGATCCCCGTTTTAAGGCTATTCCAAGTTATTCAGCTAGGAGGTCCCTGTTTGAACACTATGTTAAGACCCGTGCCGAGGAGGAACGGAAGGAAAAAAGAGCTGCTCAAAAGGCTGCAATAGAGGGATTTAAGCAGTTACTGGATAGCGCATCTGAGGTTTTATCTCTTTCCACATTGATTATTTTGGTTATTTGTCTGAAGAAGGCTGCCGTTGAAAAGGCTCAAGCCTTATGGGCTGCTTCCACCACTAGTTTCAAGTCCATGCTGAGGGAGAGAGGAGATATCAATGTCAATTCCCGTTGGTTGAGGGTAAAAGATAGCCTACGGGATGATCCAAGATACAGATCTGTCAAGCATGAGGAGCGTGAGATGTTATTCAATGAGTACATATTTGAACTTAAGGCTGTTGAAGAGGAAAAACAACGTGAATCAAAAACTAGAAAGGAGGAGCAGGTATGTAAACTTGAATTCCCAACCTTT

Coding sequence (CDS)

ATGTCATCAGCATCAACTGCCTCTCAATCCCTTTCATTACCCGCTCCGCCTACTTCCAACTCTGCAGCCAATGGATCTTCAATTCCCAATTTGATCCCCGCAACTTCACCAGTTCCTCCTGCCCCTTCTTTACATATTCATCAACTAGTGCCTGGAACTCCGATGATACCTGGTCCACCGGGAATGTCACCATCTATTCCGGTAGTGTCGACAAGTCCAGCAACTATGTTTTCACCCAGTGATTCATCTGGTTCCACTATCTCAGGACCCAATATGCATCCAACTCCCAACTCAATAAATACTTCCGTTCGTCCTCAAATATGTGGTTCGTATCCTTTAACTCATGTTGTTTCCCCACCCCACGCAATATGGTTTCAGCCTCCTCAGATGGGAGGTATGCCCAGGCCTCCCTTTCTGCCATATTCTGCTTCTTTTCACGGCCCTCTTCCTTTTCCTGCTCGTGGAATGCCCCTTCCATCTGTCCCATTGCCCGATCCTCAACCTCCTGGTGTTACCCCTGTTCAAGTTGCGTCAGCAATTACTGTGTCATCTGGTCATGGCAATCAGCTTACTGGAAATTCGGTGATCCAGATGGACTTAAATCATTCTGGACTTGATGGCCAGAAATACGCTCAAGGTGTGGTTCATTCTGAGAGCAACTCTTTAATCAAGCGCCTAGATGATTGGACTGCCCACAAGACTGAGGCTGGAATAATCTATTACTATAATGCTTTGACAGGAGAATCTACTTACGAAAAGCCTTCTGGATTTACAGGGGAGCCTGATAATCTTGCGGTGCAGCCAACATCAGTTTCGATGTCGAACTTGTCCGGTACAGATTGGGTTTTGGTCAGTATGAGTGATGGTAAAAAGTATTACTACAACAATAAGACGAAGATTAGCAGTTGGCAGATCCCAAATGAAGTGACTGAATCGAGGCAGCAGAATGATGAAAAAACGAAGGAACGTTCAGCTCCTGTGCCAAATAGTAATGCATTAACTGAACAAGGATCTTCGCCTATCAGTATCAGCACTCCTGCCATTAACACGGGTGGTCGTGAAGCCATACCCCTTAGAACGGTAGGAATATCAGCGTCATCATCTGCCCTGGATTTGATCAAGAAAAAATTACAAGATTCTGGAACTCCTGTAGCTGCCTCGCCTGTTTCAGCACCAACAATAGCCCAATCAGATGTAAATCTGCCGAGAGAGGCTGATGCTGCAGTTAAGGGACTGCAGAGTGAGAACAGCAAGGATAAGCCAAAAGATGCTAATGGTGATGGAAATGTATCGGACACCTCCTCAGACTCCGAAGATGTAGACAGTGGGCCAACTAATGAGCAGTTAATTATCCAATTTAAGGAGATGCTTAAGGAGCGGGGAGTGGCACCATTCTCTAAATGGGACAAGGAATTGCCGAAGATAGTGTTTGATCCCCGTTTTAAGGCTATTCCAAGTTATTCAGCTAGGAGGTCCCTGTTTGAACACTATGTTAAGACCCGTGCCGAGGAGGAACGGAAGGAAAAAAGAGCTGCTCAAAAGGCTGCAATAGAGGGATTTAAGCAGTTACTGGATAGCGCATCTGAGGTTTTATCTCTTTCCACATTGATTATTTTGGTTATTTGTCTGAAGAAGGCTGCCGTTGAAAAGGCTCAAGCCTTATGGGCTGCTTCCACCACTAGTTTCAAGTCCATGCTGAGGGAGAGAGGAGATATCAATGTCAATTCCCGTTGGTTGAGGGTAAAAGATAGCCTACGGGATGATCCAAGATACAGATCTGTCAAGCATGAGGAGCGTGAGATGTTATTCAATGAGTACATATTTGAACTTAAGGCTGTTGAAGAGGAAAAACAACGTGAATCAAAAACTAGAAAGGAGGAGCAGGTATGTAAACTTGAATTCCCAACCTTT

Protein sequence

MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPPGMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLSTLIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQVCKLEFPTF
Homology
BLAST of MS009668 vs. NCBI nr
Match: XP_022146153.1 (pre-mRNA-processing protein 40C [Momordica charantia])

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 618/654 (94.50%), Postives = 620/654 (94.80%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSASTASQSLSLPAPPTSNSAANGSSIPNL+PATSPVPPAPSLHIHQLVPGTPMIPGPP
Sbjct: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLMPATSPVPPAPSLHIHQLVPGTPMIPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120
           GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP
Sbjct: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120

Query: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180
           HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI
Sbjct: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180

Query: 181 TVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240
           TVSSGHGNQLTGNSVIQ DLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY
Sbjct: 181 TVSSGHGNQLTGNSVIQTDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240

Query: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300
           YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI
Sbjct: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300

Query: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360
           SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT
Sbjct: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360

Query: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420
           VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK
Sbjct: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420

Query: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480
           PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR
Sbjct: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480

Query: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST----- 540
           FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  ST     
Sbjct: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDQSTSYQTF 540

Query: 541 ---------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDINV 600
                                L   VICLKKAAVEKA ALWAASTTSFKSMLRERGDINV
Sbjct: 541 KKKWGNDPRFEALDRKDRENLLNERVICLKKAAVEKAHALWAASTTSFKSMLRERGDINV 600

Query: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ
Sbjct: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 654

BLAST of MS009668 vs. NCBI nr
Match: XP_023547625.1 (pre-mRNA-processing protein 40C [Cucurbita pepo subsp. pepo] >XP_023547626.1 pre-mRNA-processing protein 40C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1006.5 bits (2601), Expect = 1.0e-289
Identity = 543/656 (82.77%), Postives = 575/656 (87.65%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1   MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
           GMSPS+PV       MF PSDSS  STI GPNMH  PNSINTSVRPQICGSYP L  VVS
Sbjct: 61  GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120

Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
           PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180

Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           A  V S HGN LTGNS+IQ D NH  LD QK+AQG+  SES SL K  ++WTAHKTEAGI
Sbjct: 181 ATAVPSSHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           KISSWQIPNEVTE RQQNDEKTKE S P+PN+NALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSGPLPNNNALTEPGSSPISMNTPAINTGGREAMPL 360

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           RTVG+S  SSALDLIKKKLQ+SGTPVA+SP+SAPTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSK 420

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
           DKPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  +T   
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649

BLAST of MS009668 vs. NCBI nr
Match: XP_022953473.1 (pre-mRNA-processing protein 40C [Cucurbita moschata] >XP_022953474.1 pre-mRNA-processing protein 40C [Cucurbita moschata])

HSP 1 Score: 1005.0 bits (2597), Expect = 2.9e-289
Identity = 543/656 (82.77%), Postives = 574/656 (87.50%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1   MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
           GMSPS+PV       MF PSDSS  STI GPNMH  PNSINTSVRPQICGSYP L  VVS
Sbjct: 61  GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120

Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
           PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180

Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           A  V S HGN LTGNS+IQ D NH  LD QK+AQG+  SES SL K  ++WTAHKTEAGI
Sbjct: 181 ATAVPSTHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           KISSWQIPNEVTE RQQNDEKTKE SAP+PN+NALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNNALTEPGSSPISMNTPAINTGGREAMPL 360

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           RTVG+S  SSALDLIKKKLQ+SGTPVA+SP+S PTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISVPTIAQSDVNLPRDADAAVKALQTENSK 420

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
           DKPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLD ASE +  +T   
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDRASEDIDHTTSYQ 540

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK RKEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKARKEEQ 649

BLAST of MS009668 vs. NCBI nr
Match: KAG6575389.1 (Pre-mRNA-processing protein 40C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1000.7 bits (2586), Expect = 5.6e-288
Identity = 539/656 (82.16%), Postives = 574/656 (87.50%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1   MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
           GMSPS+PV       MF PSDSS  STI GPNMH  PNSINTSVRPQICGSYP L  VVS
Sbjct: 61  GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120

Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
           PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180

Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           A  V S HGN LTGNS+IQ D NH  LD QK+AQG+  SES SL K  ++WTAHKTEAGI
Sbjct: 181 ATAVPSTHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           KISSWQIPNEVTE RQQNDEKTKE S P+PN+NALTE GSSPIS++TPAI+TGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSTPLPNNNALTEPGSSPISMNTPAISTGGREAMPL 360

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           RTVG+S  SSALDLIKKKLQ+SGTPVA+SP+S PTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISVPTIAQSDVNLPRDADAAVKALQTENSK 420

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
           DKPKDANGDGNVSD+SSDSED+DSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDIDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  +T   
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+CLKKAAVEKAQALWAASTTSFKS+L+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSLLQERGDI 600

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649

BLAST of MS009668 vs. NCBI nr
Match: XP_022992104.1 (pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992105.1 pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992106.1 pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992107.1 pre-mRNA-processing protein 40C [Cucurbita maxima])

HSP 1 Score: 991.1 bits (2561), Expect = 4.4e-285
Identity = 537/656 (81.86%), Postives = 572/656 (87.20%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPAT PVPPA S HIHQL PGTPM+PGPP
Sbjct: 1   MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATLPVPPAQSFHIHQLAPGTPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
           GMSPS+PV       MF PSDSS  STI GPNMH  PNSINTSVRPQICGSYP L  VVS
Sbjct: 61  GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120

Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
           PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGM LPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMHLPSVPLPDPQPPGVTPVQVSS 180

Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           A  V S HG+ LTGNS+IQ D NH  LD  K+AQG+  SES SL K  ++WTAHKTE+GI
Sbjct: 181 ATAVPSTHGSHLTGNSLIQTDFNHPELDAHKHAQGMGQSESISLSKHSENWTAHKTESGI 240

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           KISSWQIPNEVTE RQQNDEKTKE SAP+PN++ALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNHALTEPGSSPISMNTPAINTGGREAMPL 360

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           RTVG+S  SSALDLIKKKLQ+SGTPVA+SP+SAPTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSK 420

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
            KPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 VKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  +T   
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649

BLAST of MS009668 vs. ExPASy Swiss-Prot
Match: Q9LT25 (Pre-mRNA-processing protein 40C OS=Arabidopsis thaliana OX=3702 GN=PRP40C PE=1 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 2.3e-127
Identity = 305/655 (46.56%), Postives = 398/655 (60.76%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MS AST   S S+P   T+    N ++  N+    +P+P A  + +     G P    PP
Sbjct: 49  MSIASTGFVSQSVPYSVTAQWGTNAAASSNV----NPIPQASPM-LANAPFGRPGTLAPP 108

Query: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTH-VVSP 120
           G+  S P           P  +  ST   P M   P  +N  + P +   YP  H +   
Sbjct: 109 GLMTSPPAF---------PGSNPFSTTPRPGMSAGPAQMNPGIHPHM---YPPYHSLPGT 168

Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
           P  +W QPP MGG+PR PFL +  +F G  PFP RG+  P++P     P G +P+     
Sbjct: 169 PQGMWLQPPSMGGIPRAPFLSHPTTFPGSYPFPVRGIS-PNLPYSGSHPLGASPMGSVGN 228

Query: 181 ITVSSGHGNQLT-GNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           +    G    ++ G    ++    SG+D +  +Q V +        RLD WTAHK+EAG+
Sbjct: 229 VHALPGRQPDISPGRKTEEL----SGIDDRAGSQLVGN--------RLDAWTAHKSEAGV 288

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYN++TG+STYEKP GF GEPD + VQP  VSM +L GTDW LVS +DGKKYYYNNKT
Sbjct: 289 LYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWALVSTNDGKKYYYNNKT 348

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           K+SSWQIP EV +  ++ +E+  E  A VP+++ LTE+GS   S+S PAI+ GGR+A  L
Sbjct: 349 KVSSWQIPAEVKDFGKKLEERAMESVASVPSAD-LTEKGSDLTSLSAPAISNGGRDAASL 408

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           +T      SSALDL+KKKL DSG PV+++         S+ N  +  +    G +S NS 
Sbjct: 409 KTTNF--GSSALDLVKKKLHDSGMPVSST-------ITSEANSGKTTEVTPSG-ESGNST 468

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
            K KDA G G +SD+SSDSED DSGP+ E+   QFKEMLKERG+APFSKW+KELPKI+FD
Sbjct: 469 GKVKDAPGAGALSDSSSDSEDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKELPKIIFD 528

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPS+S RRSLFE YVKTRAEEER+EKRAA KAAIEGF+QLLD AS  +   T   
Sbjct: 529 PRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLDDASTDIDQHTDYR 588

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+ LK++A +KAQ + AA+ + FK+MLRER +I
Sbjct: 589 AFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTMLRER-EI 648

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEE 628
           ++NS W +VKDSLR++PRYRSV HE+RE+ + EYI ELKA +     E K R EE
Sbjct: 649 SINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDEE 661

BLAST of MS009668 vs. ExPASy Swiss-Prot
Match: B6EUA9 (Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 9.3e-20
Identity = 121/462 (26.19%), Postives = 196/462 (42.42%), Query Frame = 0

Query: 207 GQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAV 266
           GQ+    V     N   +   DW  H +  G  YYYN  T +S +EKP            
Sbjct: 168 GQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELM-------- 227

Query: 267 QPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAP 326
             T +  ++ S T W   +  +GKKYYYN  TK S W IP ++  +R+Q    +++ S  
Sbjct: 228 --TPLERADAS-TVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS-- 287

Query: 327 VPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSG--TPV 386
                 L+E GS+P+S       +    A+   T  + ++SSAL         +G   PV
Sbjct: 288 ------LSEAGSTPLSHHAA---SSSDLAVSTVTSVVPSTSSALTGHSSSPIQAGLAVPV 347

Query: 387 AASPVSAP-------------TIAQSDVNLPREADAAVKGLQSEN--SKDKPKDANGDGN 446
              P  AP             T  + D    R AD +  G  ++N  +++K    NG  N
Sbjct: 348 TRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKAN 407

Query: 447 VSDTSSDSEDVDSG---PTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPS 506
           +S  + D  +V+      T ++    FK +L+   V     W++ L +IV D R+ A+ +
Sbjct: 408 LS-PAGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRT 467

Query: 507 YSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEV---LSLSTLIIL---- 566
              R+  F  Y+  R + E +E+R  QK A E F ++L+   E+   L  S  + L    
Sbjct: 468 LGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFEND 527

Query: 567 -------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLR 623
                              ++ L++   EKA          ++  L     I   ++W +
Sbjct: 528 QRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRK 587

BLAST of MS009668 vs. ExPASy Swiss-Prot
Match: O14776 (Transcription elongation regulator 1 OS=Homo sapiens OX=9606 GN=TCERG1 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 5.1e-18
Identity = 164/657 (24.96%), Postives = 263/657 (40.03%), Query Frame = 0

Query: 60  PGMSPSIPVVSTSPATMFSPSDSS--------GSTISGP-NMHPTPNSINTSVRPQICGS 119
           P  S   P VSTS ++    S +S          T+S P     TP+S  +   P +  S
Sbjct: 261 PTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVS 320

Query: 120 YPL-----THVVSPPHAIWFQPPQMGGMPRP----PFLPYSASFHGPLPFPARGMPLPSV 179
            P         V  PH     P     +P+P    P  P       P+  P   +PLP +
Sbjct: 321 TPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFP-------PVMVPPFRVPLPGM 380

Query: 180 PLPDPQPPGVTPVQVAS---AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSE 239
           P+P    PGV  +Q+ S     TV++     L G +   + + H         Q  + + 
Sbjct: 381 PIP---LPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIH--------PQVAIAAS 440

Query: 240 SNSL--IKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGF------------------- 299
             +L     + +WT +KT  G  YYYN  T EST+EKP                      
Sbjct: 441 PATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSE 500

Query: 300 ----------------------------TGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDG 359
                                         E +  A +   V+ + + GT W +V   D 
Sbjct: 501 EPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTGDE 560

Query: 360 KKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAIN 419
           + ++YN  T++S W  P+++   R   D+  +E     P+   + E     +   TP + 
Sbjct: 561 RVFFYNPTTRLSMWDRPDDLI-GRADVDKIIQE----PPHKKGMEE--LKKLRHPTPTM- 620

Query: 420 TGGREAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAV 479
                      + I     ++  IK++ +                   ++N     D  V
Sbjct: 621 -----------LSIQKWQFSMSAIKEEQE----------------LMEEIN----EDEPV 680

Query: 480 KGLQSENSKDKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWD 539
           K  + +   +K  D+  +  +      + +    P  E  + QFK+ML ERGV+ FS W+
Sbjct: 681 KAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPL-EARMKQFKDMLLERGVSAFSTWE 740

Query: 540 KELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSA-- 599
           KEL KIVFDPR+  + +   R+ +F+ YVKTRAEEER+EK+     A E FK++++ A  
Sbjct: 741 KELHKIVFDPRYLLL-NPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKF 800

Query: 600 ------SEVLSLSTLIILVICLKKAAVEKA--QALWAASTTSFKSMLRERGD-------- 621
                 SE  +          ++K    +A      AA+    K   + RG+        
Sbjct: 801 NPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFE 858

BLAST of MS009668 vs. ExPASy Swiss-Prot
Match: Q8CGF7 (Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-15
Identity = 171/705 (24.26%), Postives = 280/705 (39.72%), Query Frame = 0

Query: 2   SSASTASQSLSLPAPPTSNSA-ANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 61
           + A   +Q++  P P TS+ A A  +S P   P+++      +  + Q    T   P   
Sbjct: 249 AQAQVQAQAVGAPTPTTSSPAPAVSTSTPTSTPSSTTATTTTATSVAQ----TVSTPTTQ 308

Query: 62  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 121
             +PS  V   +P            T+S     PT   + T  +P     +P T   + P
Sbjct: 309 DQTPSSAVSVATP------------TVSVSAPAPTATPVQTVPQP-----HPQTLPPAVP 368

Query: 122 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS-- 181
           H++   P     +P  P          P+  P   +PLP +P+P    PGV  +Q+ S  
Sbjct: 369 HSV---PQPAAAIPAFP----------PVMVPPFRVPLPGMPIP---LPGVAMMQIVSCP 428

Query: 182 -AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSL--IKRLDDWTAHKTE 241
              TV++     L G +   + + H         Q  + +   +L     + +WT +KT 
Sbjct: 429 YVKTVATTKTGVLPGMAPPIVPMIH--------PQVAIAASPATLAGATAVSEWTEYKTA 488

Query: 242 AGIIYYYNALTGESTYEKPSGF-------------------------------------- 301
            G  YYYN  T EST+EKP                                         
Sbjct: 489 DGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPVKE 548

Query: 302 ---------TGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNE 361
                      E +  A +   V+ + + GT W +V   D + ++YN  T++S W  P++
Sbjct: 549 IKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDD 608

Query: 362 VTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSS 421
           +   R   D+  +E     P+   L +       +  PA       +I      +SA   
Sbjct: 609 LI-GRADVDKIIQE----PPHKKGLEDMK----KLRHPAPT---MLSIQKWQFSMSAIKE 668

Query: 422 ALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDKPKDANGDG 481
             +L+++  +D        P+ A                          K + +D N D 
Sbjct: 669 EQELMEEMNED-------EPIKA--------------------------KKRKRDDNKD- 728

Query: 482 NVSDTSSDSEDVDSGPTNEQLII-------QFKEMLKERGVAPFSKWDKELPKIVFDPRF 541
            +      + + +     E+ I+       QFK+ML ERGV+ FS W+KEL KIVFDPR+
Sbjct: 729 -IDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRY 788

Query: 542 KAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSA--------SEVLSL 601
             + +   R+ +F+ YVKTRAEEER+EK+     A E FK++++ A        SE  + 
Sbjct: 789 LLL-NPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAK 848

Query: 602 STLIILVICLKKAAVEKA--QALWAASTTSFKSMLRERGD--------------INVNSR 621
                    ++K    +A      AA+    K   + RG+              ++  SR
Sbjct: 849 HAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSR 860

BLAST of MS009668 vs. ExPASy Swiss-Prot
Match: Q6NWY9 (Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 7.1e-12
Identity = 122/546 (22.34%), Postives = 206/546 (37.73%), Query Frame = 0

Query: 133 MPRPPFLPYSASFHGPLPFPARGMPLPS--VPLPDPQPPGV-----TPVQVASAITVSSG 192
           M  PPF+P       P PFP  G+P  S   P   P PPG+      P+     +T   G
Sbjct: 1   MMPPPFMPPPGI---PPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQIPG 60

Query: 193 H-GNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNA 252
                + G  +  + +  +   G   A   V             W+ H    G IYYYNA
Sbjct: 61  MVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRAL----WSEHVAPDGRIYYYNA 120

Query: 253 LTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQ 312
              +S +EKPS    + + L           LS   W       GK YYYNN++K S W 
Sbjct: 121 DDKQSVWEKPSVLKSKAELL-----------LSQCPWKEYKSDTGKPYYYNNQSKESRWT 180

Query: 313 IPNEVTE-----------SRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGR 372
            P ++ +            +QQ   +T +   P P      +    P+      + TG  
Sbjct: 181 RPKDLDDLEVLVKQEAAGKQQQQLPQTLQPQPPQP------QPDPPPVPPGPTPVPTGLL 240

Query: 373 EAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQ 432
           E  P         S   D+++          A  P+    + Q +   P  +       +
Sbjct: 241 EPEP-------GGSEDCDVLE----------ATQPLEQGFLQQLEEG-PSSSGQHQPQQE 300

Query: 433 SENSKDKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELP 492
            E SK +P+ +                 S    E+    FKE+L+++ V   + W++ + 
Sbjct: 301 EEESKPEPERSG---------------LSWSNREKAKQAFKELLRDKAVPSNASWEQAMK 360

Query: 493 KIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSL 552
            +V DPR+ A+P  S ++  F  Y   R +EE++E R   K A +  +  L+    + S 
Sbjct: 361 MVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTST 420

Query: 553 S-------------------------TLIILVICLKKAAVEKAQALWAASTTSFKSMLRE 612
           +                             ++  L K   E+A+ L   +  + KS+L  
Sbjct: 421 TRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDG 480

Query: 613 RGDINVNSRWLRVKDSLRDDPRY------RSVKHEEREMLFNEYIFELKAVEEEKQRESK 629
              +N  + W + +  L D+P +      +++  E+  + F E+I  L+  EEE++  ++
Sbjct: 481 MSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERAR 489

BLAST of MS009668 vs. ExPASy TrEMBL
Match: A0A6J1CXT9 (pre-mRNA-processing protein 40C OS=Momordica charantia OX=3673 GN=LOC111015435 PE=4 SV=1)

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 618/654 (94.50%), Postives = 620/654 (94.80%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSASTASQSLSLPAPPTSNSAANGSSIPNL+PATSPVPPAPSLHIHQLVPGTPMIPGPP
Sbjct: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLMPATSPVPPAPSLHIHQLVPGTPMIPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120
           GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP
Sbjct: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120

Query: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180
           HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI
Sbjct: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180

Query: 181 TVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240
           TVSSGHGNQLTGNSVIQ DLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY
Sbjct: 181 TVSSGHGNQLTGNSVIQTDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240

Query: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300
           YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI
Sbjct: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300

Query: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360
           SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT
Sbjct: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360

Query: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420
           VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK
Sbjct: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420

Query: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480
           PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR
Sbjct: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480

Query: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST----- 540
           FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  ST     
Sbjct: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDQSTSYQTF 540

Query: 541 ---------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDINV 600
                                L   VICLKKAAVEKA ALWAASTTSFKSMLRERGDINV
Sbjct: 541 KKKWGNDPRFEALDRKDRENLLNERVICLKKAAVEKAHALWAASTTSFKSMLRERGDINV 600

Query: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ
Sbjct: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 654

BLAST of MS009668 vs. ExPASy TrEMBL
Match: A0A6J1GNF1 (pre-mRNA-processing protein 40C OS=Cucurbita moschata OX=3662 GN=LOC111456014 PE=4 SV=1)

HSP 1 Score: 1005.0 bits (2597), Expect = 1.4e-289
Identity = 543/656 (82.77%), Postives = 574/656 (87.50%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1   MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
           GMSPS+PV       MF PSDSS  STI GPNMH  PNSINTSVRPQICGSYP L  VVS
Sbjct: 61  GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120

Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
           PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180

Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           A  V S HGN LTGNS+IQ D NH  LD QK+AQG+  SES SL K  ++WTAHKTEAGI
Sbjct: 181 ATAVPSTHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           KISSWQIPNEVTE RQQNDEKTKE SAP+PN+NALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNNALTEPGSSPISMNTPAINTGGREAMPL 360

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           RTVG+S  SSALDLIKKKLQ+SGTPVA+SP+S PTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISVPTIAQSDVNLPRDADAAVKALQTENSK 420

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
           DKPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLD ASE +  +T   
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDRASEDIDHTTSYQ 540

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK RKEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKARKEEQ 649

BLAST of MS009668 vs. ExPASy TrEMBL
Match: A0A6J1JUS6 (pre-mRNA-processing protein 40C OS=Cucurbita maxima OX=3661 GN=LOC111488550 PE=4 SV=1)

HSP 1 Score: 991.1 bits (2561), Expect = 2.1e-285
Identity = 537/656 (81.86%), Postives = 572/656 (87.20%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPAT PVPPA S HIHQL PGTPM+PGPP
Sbjct: 1   MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATLPVPPAQSFHIHQLAPGTPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
           GMSPS+PV       MF PSDSS  STI GPNMH  PNSINTSVRPQICGSYP L  VVS
Sbjct: 61  GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120

Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
           PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGM LPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMHLPSVPLPDPQPPGVTPVQVSS 180

Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           A  V S HG+ LTGNS+IQ D NH  LD  K+AQG+  SES SL K  ++WTAHKTE+GI
Sbjct: 181 ATAVPSTHGSHLTGNSLIQTDFNHPELDAHKHAQGMGQSESISLSKHSENWTAHKTESGI 240

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           KISSWQIPNEVTE RQQNDEKTKE SAP+PN++ALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNHALTEPGSSPISMNTPAINTGGREAMPL 360

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           RTVG+S  SSALDLIKKKLQ+SGTPVA+SP+SAPTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSK 420

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
            KPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 VKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  +T   
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649

BLAST of MS009668 vs. ExPASy TrEMBL
Match: A0A5D3BYD0 (Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001920 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 7.8e-280
Identity = 528/661 (79.88%), Postives = 564/661 (85.33%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNS ANGSSIPNLIP+TSPVPPAPS HIHQL P  PM+PGPP
Sbjct: 1   MSSASTVSQSVSLPAPPTSNSVANGSSIPNLIPSTSPVPPAPSFHIHQLPPVAPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVSP 120
           GMSPS P+VST PA +F P+DS+ STI GPNMH   N I+ S RPQICGSYP LT VVSP
Sbjct: 61  GMSPSTPLVSTGPAVLFPPTDSA-STIPGPNMHAIHNPIHPSARPQICGSYPSLTPVVSP 120

Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
           PHA+WFQPPQ+G MPRPPF+PYSAS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA
Sbjct: 121 PHAMWFQPPQLGAMPRPPFIPYSASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180

Query: 181 ITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGII 240
           I V SGHGNQL GNS+IQ D NH  LD QK+ Q V HSE+ SL K  +DWTAHKTEAGII
Sbjct: 181 IPVPSGHGNQLIGNSLIQTDSNHPELDSQKHTQVVGHSENISLNKHSEDWTAHKTEAGII 240

Query: 241 YYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTK 300
           YYYNALTGESTYEKP GF GE +NL  Q TSVSMSNLSGTDWVLV+M DGKKYYYNNKTK
Sbjct: 241 YYYNALTGESTYEKPPGFRGEAENLVAQATSVSMSNLSGTDWVLVTMGDGKKYYYNNKTK 300

Query: 301 ISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLR 360
           ISSWQIPNEV+E RQQNDEKTKE SAP+PN+NALT+ G+S  SI+TPAINTGGREA PLR
Sbjct: 301 ISSWQIPNEVSELRQQNDEKTKELSAPLPNNNALTDLGTSSSSINTPAINTGGREATPLR 360

Query: 361 TVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKD 420
           TVGI  SSSALDLIKKKLQDSGTPVA+SP+SA T+AQSDVNLPR+ADA VK LQ+EN+KD
Sbjct: 361 TVGIPGSSSALDLIKKKLQDSGTPVASSPISATTVAQSDVNLPRDADATVKALQTENNKD 420

Query: 421 KPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480
           KPKDAN DGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP
Sbjct: 421 KPKDANADGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480

Query: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST---- 540
           RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  +T    
Sbjct: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQT 540

Query: 541 ----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDIN 600
                                 L   V+CLKKAAVEKAQALWAASTTSFKSML+ER DIN
Sbjct: 541 FKKKWGNDSRFEALDRKDRENLLNERVLCLKKAAVEKAQALWAASTTSFKSMLQEREDIN 600

Query: 601 VNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQVCKLE 635
           VNSRW RVKDSLR+DPRYRSVKHEEREMLFNEYI ELKA EEEKQRESK RKEEQ     
Sbjct: 601 VNSRWFRVKDSLREDPRYRSVKHEEREMLFNEYISELKAAEEEKQRESKARKEEQEAVAS 660

BLAST of MS009668 vs. ExPASy TrEMBL
Match: A0A5A7V0S2 (Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00550 PE=4 SV=1)

HSP 1 Score: 972.2 bits (2512), Expect = 1.0e-279
Identity = 527/655 (80.46%), Postives = 563/655 (85.95%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MSSAST SQS+SLPAPPTSNS ANGSSIPNLIP+TSPVPPAPS HIHQL P  PM+PGPP
Sbjct: 1   MSSASTVSQSVSLPAPPTSNSVANGSSIPNLIPSTSPVPPAPSFHIHQLPPVAPMVPGPP 60

Query: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVSP 120
           GMSPS P+VST PA +F P+DS+ STI GPNMH   N I+ S RPQICGSYP LT VVSP
Sbjct: 61  GMSPSTPLVSTGPAVLFPPTDSA-STIPGPNMHAIHNPIHPSARPQICGSYPSLTPVVSP 120

Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
           PHA+WFQPPQ+G MPRPPF+PYSAS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA
Sbjct: 121 PHAMWFQPPQLGAMPRPPFIPYSASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180

Query: 181 ITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGII 240
           I V SGHGNQL GNS+IQ D NH  LD QK+ Q V HSE+ SL K  +DWTAHKTEAGII
Sbjct: 181 IPVPSGHGNQLIGNSLIQTDSNHPELDSQKHTQVVGHSENISLNKHSEDWTAHKTEAGII 240

Query: 241 YYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTK 300
           YYYNALTGESTYEKP GF GE +NL  Q TSVSMSNLSGTDWVLV+M DGKKYYYNNKTK
Sbjct: 241 YYYNALTGESTYEKPPGFRGEAENLVAQATSVSMSNLSGTDWVLVTMGDGKKYYYNNKTK 300

Query: 301 ISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLR 360
           ISSWQIPNEV+E RQQNDEKTKE SAP+PN+NALT+ G+S  SI+TPAINTGGREA PLR
Sbjct: 301 ISSWQIPNEVSELRQQNDEKTKELSAPLPNNNALTDLGTSSSSINTPAINTGGREATPLR 360

Query: 361 TVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKD 420
           TVGI  SSSALDLIKKKLQDSGTPVA+SP+SA T+AQSDVNLPR+ADA VK LQ+EN+KD
Sbjct: 361 TVGIPGSSSALDLIKKKLQDSGTPVASSPISATTVAQSDVNLPRDADATVKALQTENNKD 420

Query: 421 KPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480
           KPKDAN DGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP
Sbjct: 421 KPKDANADGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480

Query: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST---- 540
           RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE +  +T    
Sbjct: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQT 540

Query: 541 ----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDIN 600
                                 L   V+CLKKAAVEKAQALWAASTTSFKSML+ER DIN
Sbjct: 541 FKKKWGNDSRFEALDRKDRENLLNERVLCLKKAAVEKAQALWAASTTSFKSMLQEREDIN 600

Query: 601 VNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
           VNSRW RVKDSLR+DPRYRSVKHEEREMLFNEYI ELKA EEEKQRESK RKEEQ
Sbjct: 601 VNSRWFRVKDSLREDPRYRSVKHEEREMLFNEYISELKAAEEEKQRESKARKEEQ 654

BLAST of MS009668 vs. TAIR 10
Match: AT3G19840.1 (pre-mRNA-processing protein 40C )

HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-128
Identity = 305/655 (46.56%), Postives = 398/655 (60.76%), Query Frame = 0

Query: 1   MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
           MS AST   S S+P   T+    N ++  N+    +P+P A  + +     G P    PP
Sbjct: 49  MSIASTGFVSQSVPYSVTAQWGTNAAASSNV----NPIPQASPM-LANAPFGRPGTLAPP 108

Query: 61  GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTH-VVSP 120
           G+  S P           P  +  ST   P M   P  +N  + P +   YP  H +   
Sbjct: 109 GLMTSPPAF---------PGSNPFSTTPRPGMSAGPAQMNPGIHPHM---YPPYHSLPGT 168

Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
           P  +W QPP MGG+PR PFL +  +F G  PFP RG+  P++P     P G +P+     
Sbjct: 169 PQGMWLQPPSMGGIPRAPFLSHPTTFPGSYPFPVRGIS-PNLPYSGSHPLGASPMGSVGN 228

Query: 181 ITVSSGHGNQLT-GNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
           +    G    ++ G    ++    SG+D +  +Q V +        RLD WTAHK+EAG+
Sbjct: 229 VHALPGRQPDISPGRKTEEL----SGIDDRAGSQLVGN--------RLDAWTAHKSEAGV 288

Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
           +YYYN++TG+STYEKP GF GEPD + VQP  VSM +L GTDW LVS +DGKKYYYNNKT
Sbjct: 289 LYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWALVSTNDGKKYYYNNKT 348

Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
           K+SSWQIP EV +  ++ +E+  E  A VP+++ LTE+GS   S+S PAI+ GGR+A  L
Sbjct: 349 KVSSWQIPAEVKDFGKKLEERAMESVASVPSAD-LTEKGSDLTSLSAPAISNGGRDAASL 408

Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
           +T      SSALDL+KKKL DSG PV+++         S+ N  +  +    G +S NS 
Sbjct: 409 KTTNF--GSSALDLVKKKLHDSGMPVSST-------ITSEANSGKTTEVTPSG-ESGNST 468

Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
            K KDA G G +SD+SSDSED DSGP+ E+   QFKEMLKERG+APFSKW+KELPKI+FD
Sbjct: 469 GKVKDAPGAGALSDSSSDSEDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKELPKIIFD 528

Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
           PRFKAIPS+S RRSLFE YVKTRAEEER+EKRAA KAAIEGF+QLLD AS  +   T   
Sbjct: 529 PRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLDDASTDIDQHTDYR 588

Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
                                  L   V+ LK++A +KAQ + AA+ + FK+MLRER +I
Sbjct: 589 AFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTMLRER-EI 648

Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEE 628
           ++NS W +VKDSLR++PRYRSV HE+RE+ + EYI ELKA +     E K R EE
Sbjct: 649 SINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDEE 661

BLAST of MS009668 vs. TAIR 10
Match: AT1G44910.1 (pre-mRNA-processing protein 40A )

HSP 1 Score: 100.1 bits (248), Expect = 6.6e-21
Identity = 121/462 (26.19%), Postives = 196/462 (42.42%), Query Frame = 0

Query: 207 GQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAV 266
           GQ+    V     N   +   DW  H +  G  YYYN  T +S +EKP            
Sbjct: 168 GQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELM-------- 227

Query: 267 QPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAP 326
             T +  ++ S T W   +  +GKKYYYN  TK S W IP ++  +R+Q    +++ S  
Sbjct: 228 --TPLERADAS-TVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS-- 287

Query: 327 VPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSG--TPV 386
                 L+E GS+P+S       +    A+   T  + ++SSAL         +G   PV
Sbjct: 288 ------LSEAGSTPLSHHAA---SSSDLAVSTVTSVVPSTSSALTGHSSSPIQAGLAVPV 347

Query: 387 AASPVSAP-------------TIAQSDVNLPREADAAVKGLQSEN--SKDKPKDANGDGN 446
              P  AP             T  + D    R AD +  G  ++N  +++K    NG  N
Sbjct: 348 TRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKAN 407

Query: 447 VSDTSSDSEDVDSG---PTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPS 506
           +S  + D  +V+      T ++    FK +L+   V     W++ L +IV D R+ A+ +
Sbjct: 408 LS-PAGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRT 467

Query: 507 YSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEV---LSLSTLIIL---- 566
              R+  F  Y+  R + E +E+R  QK A E F ++L+   E+   L  S  + L    
Sbjct: 468 LGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFEND 527

Query: 567 -------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLR 623
                              ++ L++   EKA          ++  L     I   ++W +
Sbjct: 528 QRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRK 587

BLAST of MS009668 vs. TAIR 10
Match: AT1G44910.2 (pre-mRNA-processing protein 40A )

HSP 1 Score: 100.1 bits (248), Expect = 6.6e-21
Identity = 121/462 (26.19%), Postives = 196/462 (42.42%), Query Frame = 0

Query: 207 GQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAV 266
           GQ+    V     N   +   DW  H +  G  YYYN  T +S +EKP            
Sbjct: 168 GQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELM-------- 227

Query: 267 QPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAP 326
             T +  ++ S T W   +  +GKKYYYN  TK S W IP ++  +R+Q    +++ S  
Sbjct: 228 --TPLERADAS-TVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS-- 287

Query: 327 VPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSG--TPV 386
                 L+E GS+P+S       +    A+   T  + ++SSAL         +G   PV
Sbjct: 288 ------LSEAGSTPLSHHAA---SSSDLAVSTVTSVVPSTSSALTGHSSSPIQAGLAVPV 347

Query: 387 AASPVSAP-------------TIAQSDVNLPREADAAVKGLQSEN--SKDKPKDANGDGN 446
              P  AP             T  + D    R AD +  G  ++N  +++K    NG  N
Sbjct: 348 TRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKAN 407

Query: 447 VSDTSSDSEDVDSG---PTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPS 506
           +S  + D  +V+      T ++    FK +L+   V     W++ L +IV D R+ A+ +
Sbjct: 408 LS-PAGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRT 467

Query: 507 YSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEV---LSLSTLIIL---- 566
              R+  F  Y+  R + E +E+R  QK A E F ++L+   E+   L  S  + L    
Sbjct: 468 LGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFEND 527

Query: 567 -------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLR 623
                              ++ L++   EKA          ++  L     I   ++W +
Sbjct: 528 QRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRK 587

BLAST of MS009668 vs. TAIR 10
Match: AT3G19670.1 (pre-mRNA-processing protein 40B )

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-14
Identity = 115/473 (24.31%), Postives = 192/473 (40.59%), Query Frame = 0

Query: 224 KRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVL 283
           K L DW  H +  G  Y++N  T +ST+EKP           V+  ++     + TDW  
Sbjct: 204 KALTDWVEHTSADGRKYFFNKRTKKSTWEKP-----------VELMTLFERADARTDWKE 263

Query: 284 VSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISI 343
            S  DG+KYYYN  TK S+W +P E+   R+Q     +  S   P++  + +  +S +  
Sbjct: 264 HSSPDGRKYYYNKITKQSTWTMPEEMKIVREQ----AEIASVQGPHAEGIID--ASEVLT 323

Query: 344 STPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPV-------------- 403
            +   +T     +P +T   S     L L     Q +  P ++SPV              
Sbjct: 324 RSDTASTAAPTGLPSQT-STSEGVEKLTLTSDLKQPASVPGSSSPVENVDRVQMSADETS 383

Query: 404 -----------SAPTIAQSDVNLPREADAAVKGLQSENSKDKPKDAN-GDGNVSDTSS-- 463
                      S P    S   L  + + +V G   ++     K+AN G G+    S   
Sbjct: 384 QLCDTSETDGLSVPVTETSAATLVEKDEISV-GNSGDSDDMSTKNANQGSGSGPKESQKP 443

Query: 464 --DSEDVDSGPTNEQL-------------IIQFKEMLKERGVAPFSKWDKELPKIVFDPR 523
             +SE V+S    +Q+             +  FK +LK   V     W++ + +I+ D R
Sbjct: 444 MVESEKVESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREIINDKR 503

Query: 524 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLS----TL 583
           + A+ +   R+  F  ++        +E+ A QK   E FK++L+   E+   +    T+
Sbjct: 504 YGALRTLGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRWSKTV 563

Query: 584 IIL----------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINV 628
            +                       V  LK+    KA      +   +K  L     I  
Sbjct: 564 TMFEDDERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCNFIKP 623

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146153.10.0e+0094.50pre-mRNA-processing protein 40C [Momordica charantia][more]
XP_023547625.11.0e-28982.77pre-mRNA-processing protein 40C [Cucurbita pepo subsp. pepo] >XP_023547626.1 pre... [more]
XP_022953473.12.9e-28982.77pre-mRNA-processing protein 40C [Cucurbita moschata] >XP_022953474.1 pre-mRNA-pr... [more]
KAG6575389.15.6e-28882.16Pre-mRNA-processing protein 40C, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022992104.14.4e-28581.86pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992105.1 pre-mRNA-proc... [more]
Match NameE-valueIdentityDescription
Q9LT252.3e-12746.56Pre-mRNA-processing protein 40C OS=Arabidopsis thaliana OX=3702 GN=PRP40C PE=1 S... [more]
B6EUA99.3e-2026.19Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 S... [more]
O147765.1e-1824.96Transcription elongation regulator 1 OS=Homo sapiens OX=9606 GN=TCERG1 PE=1 SV=2[more]
Q8CGF71.4e-1524.26Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=... [more]
Q6NWY97.1e-1222.34Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A6J1CXT90.0e+0094.50pre-mRNA-processing protein 40C OS=Momordica charantia OX=3673 GN=LOC111015435 P... [more]
A0A6J1GNF11.4e-28982.77pre-mRNA-processing protein 40C OS=Cucurbita moschata OX=3662 GN=LOC111456014 PE... [more]
A0A6J1JUS62.1e-28581.86pre-mRNA-processing protein 40C OS=Cucurbita maxima OX=3661 GN=LOC111488550 PE=4... [more]
A0A5D3BYD07.8e-28079.88Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7V0S21.0e-27980.46Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
AT3G19840.11.6e-12846.56pre-mRNA-processing protein 40C [more]
AT1G44910.16.6e-2126.19pre-mRNA-processing protein 40A [more]
AT1G44910.26.6e-2126.19pre-mRNA-processing protein 40A [more]
AT3G19670.12.1e-1424.31pre-mRNA-processing protein 40B [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 224..256
e-value: 1.2E-6
score: 38.1
coord: 276..308
e-value: 0.0024
score: 27.1
IPR001202WW domainPFAMPF00397WWcoord: 227..254
e-value: 1.2E-7
score: 31.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 229..254
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 281..306
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 281..308
score: 10.915601
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 229..256
score: 9.713901
IPR001202WW domainCDDcd00201WWcoord: 279..308
e-value: 2.76722E-6
score: 42.1298
IPR001202WW domainCDDcd00201WWcoord: 227..254
e-value: 1.19067E-7
score: 45.9818
IPR002713FF domainSMARTSM00441FF_2coord: 446..500
e-value: 6.9E-9
score: 45.5
coord: 555..609
e-value: 0.99
score: 18.4
IPR002713FF domainPFAMPF01846FFcoord: 561..606
e-value: 1.0E-10
score: 41.6
coord: 452..497
e-value: 4.5E-12
score: 46.0
IPR002713FF domainPROSITEPS51676FFcoord: 552..609
score: 8.906079
IPR002713FF domainPROSITEPS51676FFcoord: 445..500
score: 10.244658
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 445..512
e-value: 1.2E-19
score: 72.2
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 542..623
e-value: 5.3E-15
score: 57.2
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 446..506
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 551..616
NoneNo IPR availableGENE3D2.20.70.10coord: 226..265
e-value: 1.3E-10
score: 42.5
NoneNo IPR availableGENE3D2.20.70.10coord: 266..326
e-value: 3.8E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..348
NoneNo IPR availablePANTHERPTHR15377:SF3TRANSCRIPTION ELONGATION REGULATOR HOMOLOGcoord: 3..628
IPR045148Transcription elongation regulator 1-likePANTHERPTHR15377TRANSCRIPTION ELONGATION REGULATOR 1coord: 3..628
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 280..311
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 228..259

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS009668.1MS009668.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0070063 RNA polymerase binding
molecular_function GO:0003712 transcription coregulator activity