Homology
BLAST of MS009668 vs. NCBI nr
Match:
XP_022146153.1 (pre-mRNA-processing protein 40C [Momordica charantia])
HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 618/654 (94.50%), Postives = 620/654 (94.80%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSASTASQSLSLPAPPTSNSAANGSSIPNL+PATSPVPPAPSLHIHQLVPGTPMIPGPP
Sbjct: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLMPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120
GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP
Sbjct: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120
Query: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180
HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI
Sbjct: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180
Query: 181 TVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240
TVSSGHGNQLTGNSVIQ DLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY
Sbjct: 181 TVSSGHGNQLTGNSVIQTDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240
Query: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300
YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI
Sbjct: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300
Query: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360
SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT
Sbjct: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360
Query: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420
VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK
Sbjct: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420
Query: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480
PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR
Sbjct: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480
Query: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST----- 540
FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + ST
Sbjct: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDQSTSYQTF 540
Query: 541 ---------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDINV 600
L VICLKKAAVEKA ALWAASTTSFKSMLRERGDINV
Sbjct: 541 KKKWGNDPRFEALDRKDRENLLNERVICLKKAAVEKAHALWAASTTSFKSMLRERGDINV 600
Query: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ
Sbjct: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 654
BLAST of MS009668 vs. NCBI nr
Match:
XP_023547625.1 (pre-mRNA-processing protein 40C [Cucurbita pepo subsp. pepo] >XP_023547626.1 pre-mRNA-processing protein 40C [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1006.5 bits (2601), Expect = 1.0e-289
Identity = 543/656 (82.77%), Postives = 575/656 (87.65%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1 MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
GMSPS+PV MF PSDSS STI GPNMH PNSINTSVRPQICGSYP L VVS
Sbjct: 61 GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120
Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180
Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
A V S HGN LTGNS+IQ D NH LD QK+AQG+ SES SL K ++WTAHKTEAGI
Sbjct: 181 ATAVPSSHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
KISSWQIPNEVTE RQQNDEKTKE S P+PN+NALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSGPLPNNNALTEPGSSPISMNTPAINTGGREAMPL 360
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
RTVG+S SSALDLIKKKLQ+SGTPVA+SP+SAPTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSK 420
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
DKPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + +T
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649
BLAST of MS009668 vs. NCBI nr
Match:
XP_022953473.1 (pre-mRNA-processing protein 40C [Cucurbita moschata] >XP_022953474.1 pre-mRNA-processing protein 40C [Cucurbita moschata])
HSP 1 Score: 1005.0 bits (2597), Expect = 2.9e-289
Identity = 543/656 (82.77%), Postives = 574/656 (87.50%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1 MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
GMSPS+PV MF PSDSS STI GPNMH PNSINTSVRPQICGSYP L VVS
Sbjct: 61 GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120
Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180
Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
A V S HGN LTGNS+IQ D NH LD QK+AQG+ SES SL K ++WTAHKTEAGI
Sbjct: 181 ATAVPSTHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
KISSWQIPNEVTE RQQNDEKTKE SAP+PN+NALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNNALTEPGSSPISMNTPAINTGGREAMPL 360
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
RTVG+S SSALDLIKKKLQ+SGTPVA+SP+S PTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISVPTIAQSDVNLPRDADAAVKALQTENSK 420
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
DKPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLD ASE + +T
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDRASEDIDHTTSYQ 540
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK RKEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKARKEEQ 649
BLAST of MS009668 vs. NCBI nr
Match:
KAG6575389.1 (Pre-mRNA-processing protein 40C, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1000.7 bits (2586), Expect = 5.6e-288
Identity = 539/656 (82.16%), Postives = 574/656 (87.50%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1 MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
GMSPS+PV MF PSDSS STI GPNMH PNSINTSVRPQICGSYP L VVS
Sbjct: 61 GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120
Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180
Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
A V S HGN LTGNS+IQ D NH LD QK+AQG+ SES SL K ++WTAHKTEAGI
Sbjct: 181 ATAVPSTHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
KISSWQIPNEVTE RQQNDEKTKE S P+PN+NALTE GSSPIS++TPAI+TGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSTPLPNNNALTEPGSSPISMNTPAISTGGREAMPL 360
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
RTVG+S SSALDLIKKKLQ+SGTPVA+SP+S PTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISVPTIAQSDVNLPRDADAAVKALQTENSK 420
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
DKPKDANGDGNVSD+SSDSED+DSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDIDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + +T
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+CLKKAAVEKAQALWAASTTSFKS+L+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSLLQERGDI 600
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649
BLAST of MS009668 vs. NCBI nr
Match:
XP_022992104.1 (pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992105.1 pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992106.1 pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992107.1 pre-mRNA-processing protein 40C [Cucurbita maxima])
HSP 1 Score: 991.1 bits (2561), Expect = 4.4e-285
Identity = 537/656 (81.86%), Postives = 572/656 (87.20%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPAT PVPPA S HIHQL PGTPM+PGPP
Sbjct: 1 MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATLPVPPAQSFHIHQLAPGTPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
GMSPS+PV MF PSDSS STI GPNMH PNSINTSVRPQICGSYP L VVS
Sbjct: 61 GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120
Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGM LPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMHLPSVPLPDPQPPGVTPVQVSS 180
Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
A V S HG+ LTGNS+IQ D NH LD K+AQG+ SES SL K ++WTAHKTE+GI
Sbjct: 181 ATAVPSTHGSHLTGNSLIQTDFNHPELDAHKHAQGMGQSESISLSKHSENWTAHKTESGI 240
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
KISSWQIPNEVTE RQQNDEKTKE SAP+PN++ALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNHALTEPGSSPISMNTPAINTGGREAMPL 360
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
RTVG+S SSALDLIKKKLQ+SGTPVA+SP+SAPTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSK 420
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
KPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 VKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + +T
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649
BLAST of MS009668 vs. ExPASy Swiss-Prot
Match:
Q9LT25 (Pre-mRNA-processing protein 40C OS=Arabidopsis thaliana OX=3702 GN=PRP40C PE=1 SV=1)
HSP 1 Score: 457.6 bits (1176), Expect = 2.3e-127
Identity = 305/655 (46.56%), Postives = 398/655 (60.76%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MS AST S S+P T+ N ++ N+ +P+P A + + G P PP
Sbjct: 49 MSIASTGFVSQSVPYSVTAQWGTNAAASSNV----NPIPQASPM-LANAPFGRPGTLAPP 108
Query: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTH-VVSP 120
G+ S P P + ST P M P +N + P + YP H +
Sbjct: 109 GLMTSPPAF---------PGSNPFSTTPRPGMSAGPAQMNPGIHPHM---YPPYHSLPGT 168
Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
P +W QPP MGG+PR PFL + +F G PFP RG+ P++P P G +P+
Sbjct: 169 PQGMWLQPPSMGGIPRAPFLSHPTTFPGSYPFPVRGIS-PNLPYSGSHPLGASPMGSVGN 228
Query: 181 ITVSSGHGNQLT-GNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
+ G ++ G ++ SG+D + +Q V + RLD WTAHK+EAG+
Sbjct: 229 VHALPGRQPDISPGRKTEEL----SGIDDRAGSQLVGN--------RLDAWTAHKSEAGV 288
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYN++TG+STYEKP GF GEPD + VQP VSM +L GTDW LVS +DGKKYYYNNKT
Sbjct: 289 LYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWALVSTNDGKKYYYNNKT 348
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
K+SSWQIP EV + ++ +E+ E A VP+++ LTE+GS S+S PAI+ GGR+A L
Sbjct: 349 KVSSWQIPAEVKDFGKKLEERAMESVASVPSAD-LTEKGSDLTSLSAPAISNGGRDAASL 408
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
+T SSALDL+KKKL DSG PV+++ S+ N + + G +S NS
Sbjct: 409 KTTNF--GSSALDLVKKKLHDSGMPVSST-------ITSEANSGKTTEVTPSG-ESGNST 468
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
K KDA G G +SD+SSDSED DSGP+ E+ QFKEMLKERG+APFSKW+KELPKI+FD
Sbjct: 469 GKVKDAPGAGALSDSSSDSEDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKELPKIIFD 528
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPS+S RRSLFE YVKTRAEEER+EKRAA KAAIEGF+QLLD AS + T
Sbjct: 529 PRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLDDASTDIDQHTDYR 588
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+ LK++A +KAQ + AA+ + FK+MLRER +I
Sbjct: 589 AFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTMLRER-EI 648
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEE 628
++NS W +VKDSLR++PRYRSV HE+RE+ + EYI ELKA + E K R EE
Sbjct: 649 SINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDEE 661
BLAST of MS009668 vs. ExPASy Swiss-Prot
Match:
B6EUA9 (Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 9.3e-20
Identity = 121/462 (26.19%), Postives = 196/462 (42.42%), Query Frame = 0
Query: 207 GQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAV 266
GQ+ V N + DW H + G YYYN T +S +EKP
Sbjct: 168 GQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELM-------- 227
Query: 267 QPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAP 326
T + ++ S T W + +GKKYYYN TK S W IP ++ +R+Q +++ S
Sbjct: 228 --TPLERADAS-TVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS-- 287
Query: 327 VPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSG--TPV 386
L+E GS+P+S + A+ T + ++SSAL +G PV
Sbjct: 288 ------LSEAGSTPLSHHAA---SSSDLAVSTVTSVVPSTSSALTGHSSSPIQAGLAVPV 347
Query: 387 AASPVSAP-------------TIAQSDVNLPREADAAVKGLQSEN--SKDKPKDANGDGN 446
P AP T + D R AD + G ++N +++K NG N
Sbjct: 348 TRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKAN 407
Query: 447 VSDTSSDSEDVDSG---PTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPS 506
+S + D +V+ T ++ FK +L+ V W++ L +IV D R+ A+ +
Sbjct: 408 LS-PAGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRT 467
Query: 507 YSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEV---LSLSTLIIL---- 566
R+ F Y+ R + E +E+R QK A E F ++L+ E+ L S + L
Sbjct: 468 LGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFEND 527
Query: 567 -------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLR 623
++ L++ EKA ++ L I ++W +
Sbjct: 528 QRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRK 587
BLAST of MS009668 vs. ExPASy Swiss-Prot
Match:
O14776 (Transcription elongation regulator 1 OS=Homo sapiens OX=9606 GN=TCERG1 PE=1 SV=2)
HSP 1 Score: 94.4 bits (233), Expect = 5.1e-18
Identity = 164/657 (24.96%), Postives = 263/657 (40.03%), Query Frame = 0
Query: 60 PGMSPSIPVVSTSPATMFSPSDSS--------GSTISGP-NMHPTPNSINTSVRPQICGS 119
P S P VSTS ++ S +S T+S P TP+S + P + S
Sbjct: 261 PTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVS 320
Query: 120 YPL-----THVVSPPHAIWFQPPQMGGMPRP----PFLPYSASFHGPLPFPARGMPLPSV 179
P V PH P +P+P P P P+ P +PLP +
Sbjct: 321 TPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFP-------PVMVPPFRVPLPGM 380
Query: 180 PLPDPQPPGVTPVQVAS---AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSE 239
P+P PGV +Q+ S TV++ L G + + + H Q + +
Sbjct: 381 PIP---LPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIH--------PQVAIAAS 440
Query: 240 SNSL--IKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGF------------------- 299
+L + +WT +KT G YYYN T EST+EKP
Sbjct: 441 PATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSE 500
Query: 300 ----------------------------TGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDG 359
E + A + V+ + + GT W +V D
Sbjct: 501 EPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATAPIPGTPWCVVWTGDE 560
Query: 360 KKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAIN 419
+ ++YN T++S W P+++ R D+ +E P+ + E + TP +
Sbjct: 561 RVFFYNPTTRLSMWDRPDDLI-GRADVDKIIQE----PPHKKGMEE--LKKLRHPTPTM- 620
Query: 420 TGGREAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAV 479
+ I ++ IK++ + ++N D V
Sbjct: 621 -----------LSIQKWQFSMSAIKEEQE----------------LMEEIN----EDEPV 680
Query: 480 KGLQSENSKDKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWD 539
K + + +K D+ + + + + P E + QFK+ML ERGV+ FS W+
Sbjct: 681 KAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPL-EARMKQFKDMLLERGVSAFSTWE 740
Query: 540 KELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSA-- 599
KEL KIVFDPR+ + + R+ +F+ YVKTRAEEER+EK+ A E FK++++ A
Sbjct: 741 KELHKIVFDPRYLLL-NPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKF 800
Query: 600 ------SEVLSLSTLIILVICLKKAAVEKA--QALWAASTTSFKSMLRERGD-------- 621
SE + ++K +A AA+ K + RG+
Sbjct: 801 NPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFE 858
BLAST of MS009668 vs. ExPASy Swiss-Prot
Match:
Q8CGF7 (Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2)
HSP 1 Score: 86.3 bits (212), Expect = 1.4e-15
Identity = 171/705 (24.26%), Postives = 280/705 (39.72%), Query Frame = 0
Query: 2 SSASTASQSLSLPAPPTSNSA-ANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 61
+ A +Q++ P P TS+ A A +S P P+++ + + Q T P
Sbjct: 249 AQAQVQAQAVGAPTPTTSSPAPAVSTSTPTSTPSSTTATTTTATSVAQ----TVSTPTTQ 308
Query: 62 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 121
+PS V +P T+S PT + T +P +P T + P
Sbjct: 309 DQTPSSAVSVATP------------TVSVSAPAPTATPVQTVPQP-----HPQTLPPAVP 368
Query: 122 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS-- 181
H++ P +P P P+ P +PLP +P+P PGV +Q+ S
Sbjct: 369 HSV---PQPAAAIPAFP----------PVMVPPFRVPLPGMPIP---LPGVAMMQIVSCP 428
Query: 182 -AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSL--IKRLDDWTAHKTE 241
TV++ L G + + + H Q + + +L + +WT +KT
Sbjct: 429 YVKTVATTKTGVLPGMAPPIVPMIH--------PQVAIAASPATLAGATAVSEWTEYKTA 488
Query: 242 AGIIYYYNALTGESTYEKPSGF-------------------------------------- 301
G YYYN T EST+EKP
Sbjct: 489 DGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEPLPMETEEEDPKEEPVKE 548
Query: 302 ---------TGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNE 361
E + A + V+ + + GT W +V D + ++YN T++S W P++
Sbjct: 549 IKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDD 608
Query: 362 VTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSS 421
+ R D+ +E P+ L + + PA +I +SA
Sbjct: 609 LI-GRADVDKIIQE----PPHKKGLEDMK----KLRHPAPT---MLSIQKWQFSMSAIKE 668
Query: 422 ALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDKPKDANGDG 481
+L+++ +D P+ A K + +D N D
Sbjct: 669 EQELMEEMNED-------EPIKA--------------------------KKRKRDDNKD- 728
Query: 482 NVSDTSSDSEDVDSGPTNEQLII-------QFKEMLKERGVAPFSKWDKELPKIVFDPRF 541
+ + + + E+ I+ QFK+ML ERGV+ FS W+KEL KIVFDPR+
Sbjct: 729 -IDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRY 788
Query: 542 KAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSA--------SEVLSL 601
+ + R+ +F+ YVKTRAEEER+EK+ A E FK++++ A SE +
Sbjct: 789 LLL-NPKERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAK 848
Query: 602 STLIILVICLKKAAVEKA--QALWAASTTSFKSMLRERGD--------------INVNSR 621
++K +A AA+ K + RG+ ++ SR
Sbjct: 849 HAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSR 860
BLAST of MS009668 vs. ExPASy Swiss-Prot
Match:
Q6NWY9 (Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 7.1e-12
Identity = 122/546 (22.34%), Postives = 206/546 (37.73%), Query Frame = 0
Query: 133 MPRPPFLPYSASFHGPLPFPARGMPLPS--VPLPDPQPPGV-----TPVQVASAITVSSG 192
M PPF+P P PFP G+P S P P PPG+ P+ +T G
Sbjct: 1 MMPPPFMPPPGI---PPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQIPG 60
Query: 193 H-GNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNA 252
+ G + + + + G A V W+ H G IYYYNA
Sbjct: 61 MVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRAL----WSEHVAPDGRIYYYNA 120
Query: 253 LTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQ 312
+S +EKPS + + L LS W GK YYYNN++K S W
Sbjct: 121 DDKQSVWEKPSVLKSKAELL-----------LSQCPWKEYKSDTGKPYYYNNQSKESRWT 180
Query: 313 IPNEVTE-----------SRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGR 372
P ++ + +QQ +T + P P + P+ + TG
Sbjct: 181 RPKDLDDLEVLVKQEAAGKQQQQLPQTLQPQPPQP------QPDPPPVPPGPTPVPTGLL 240
Query: 373 EAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQ 432
E P S D+++ A P+ + Q + P + +
Sbjct: 241 EPEP-------GGSEDCDVLE----------ATQPLEQGFLQQLEEG-PSSSGQHQPQQE 300
Query: 433 SENSKDKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELP 492
E SK +P+ + S E+ FKE+L+++ V + W++ +
Sbjct: 301 EEESKPEPERSG---------------LSWSNREKAKQAFKELLRDKAVPSNASWEQAMK 360
Query: 493 KIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSL 552
+V DPR+ A+P S ++ F Y R +EE++E R K A + + L+ + S
Sbjct: 361 MVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTST 420
Query: 553 S-------------------------TLIILVICLKKAAVEKAQALWAASTTSFKSMLRE 612
+ ++ L K E+A+ L + + KS+L
Sbjct: 421 TRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDG 480
Query: 613 RGDINVNSRWLRVKDSLRDDPRY------RSVKHEEREMLFNEYIFELKAVEEEKQRESK 629
+N + W + + L D+P + +++ E+ + F E+I L+ EEE++ ++
Sbjct: 481 MSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERAR 489
BLAST of MS009668 vs. ExPASy TrEMBL
Match:
A0A6J1CXT9 (pre-mRNA-processing protein 40C OS=Momordica charantia OX=3673 GN=LOC111015435 PE=4 SV=1)
HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 618/654 (94.50%), Postives = 620/654 (94.80%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSASTASQSLSLPAPPTSNSAANGSSIPNL+PATSPVPPAPSLHIHQLVPGTPMIPGPP
Sbjct: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLMPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120
GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP
Sbjct: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTHVVSPP 120
Query: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180
HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI
Sbjct: 121 HAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASAI 180
Query: 181 TVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240
TVSSGHGNQLTGNSVIQ DLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY
Sbjct: 181 TVSSGHGNQLTGNSVIQTDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIY 240
Query: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300
YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI
Sbjct: 241 YYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKI 300
Query: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360
SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT
Sbjct: 301 SSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLRT 360
Query: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420
VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK
Sbjct: 361 VGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKDK 420
Query: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480
PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR
Sbjct: 421 PKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPR 480
Query: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST----- 540
FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + ST
Sbjct: 481 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDQSTSYQTF 540
Query: 541 ---------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDINV 600
L VICLKKAAVEKA ALWAASTTSFKSMLRERGDINV
Sbjct: 541 KKKWGNDPRFEALDRKDRENLLNERVICLKKAAVEKAHALWAASTTSFKSMLRERGDINV 600
Query: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ
Sbjct: 601 NSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 654
BLAST of MS009668 vs. ExPASy TrEMBL
Match:
A0A6J1GNF1 (pre-mRNA-processing protein 40C OS=Cucurbita moschata OX=3662 GN=LOC111456014 PE=4 SV=1)
HSP 1 Score: 1005.0 bits (2597), Expect = 1.4e-289
Identity = 543/656 (82.77%), Postives = 574/656 (87.50%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPATSPVPPA S HIHQL PGTPM+PGPP
Sbjct: 1 MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATSPVPPAQSFHIHQLAPGTPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
GMSPS+PV MF PSDSS STI GPNMH PNSINTSVRPQICGSYP L VVS
Sbjct: 61 GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120
Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVSS 180
Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
A V S HGN LTGNS+IQ D NH LD QK+AQG+ SES SL K ++WTAHKTEAGI
Sbjct: 181 ATAVPSTHGNHLTGNSLIQTDFNHPELDAQKHAQGMGQSESISLSKHSENWTAHKTEAGI 240
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
KISSWQIPNEVTE RQQNDEKTKE SAP+PN+NALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNNALTEPGSSPISMNTPAINTGGREAMPL 360
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
RTVG+S SSALDLIKKKLQ+SGTPVA+SP+S PTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISVPTIAQSDVNLPRDADAAVKALQTENSK 420
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
DKPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 DKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLD ASE + +T
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDRASEDIDHTTSYQ 540
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK RKEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKARKEEQ 649
BLAST of MS009668 vs. ExPASy TrEMBL
Match:
A0A6J1JUS6 (pre-mRNA-processing protein 40C OS=Cucurbita maxima OX=3661 GN=LOC111488550 PE=4 SV=1)
HSP 1 Score: 991.1 bits (2561), Expect = 2.1e-285
Identity = 537/656 (81.86%), Postives = 572/656 (87.20%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNSAANGSSIPNLIPAT PVPPA S HIHQL PGTPM+PGPP
Sbjct: 1 MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATLPVPPAQSFHIHQLAPGTPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSS-GSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVS 120
GMSPS+PV MF PSDSS STI GPNMH PNSINTSVRPQICGSYP L VVS
Sbjct: 61 GMSPSMPV-------MFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVS 120
Query: 121 PPHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVAS 180
PPHAIWFQPPQ+GGMPRPPFLPY AS+HGPLPFPARGM LPSVPLPDPQPPGVTPVQV+S
Sbjct: 121 PPHAIWFQPPQLGGMPRPPFLPYPASYHGPLPFPARGMHLPSVPLPDPQPPGVTPVQVSS 180
Query: 181 AITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
A V S HG+ LTGNS+IQ D NH LD K+AQG+ SES SL K ++WTAHKTE+GI
Sbjct: 181 ATAVPSTHGSHLTGNSLIQTDFNHPELDAHKHAQGMGQSESISLSKHSENWTAHKTESGI 240
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYNALTGESTYEKPSGF GEPDNL VQPTSVSMSNLSGTDWVLV+M DGKKYYYNNKT
Sbjct: 241 MYYYNALTGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKT 300
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
KISSWQIPNEVTE RQQNDEKTKE SAP+PN++ALTE GSSPIS++TPAINTGGREA+PL
Sbjct: 301 KISSWQIPNEVTELRQQNDEKTKEHSAPLPNNHALTEPGSSPISMNTPAINTGGREAMPL 360
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
RTVG+S SSALDLIKKKLQ+SGTPVA+SP+SAPTIAQSDVNLPR+ADAAVK LQ+ENSK
Sbjct: 361 RTVGVSGPSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSK 420
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
KPKDANGDGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD
Sbjct: 421 VKPKDANGDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPSYSARRSLFEH+VKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + +T
Sbjct: 481 PRFKAIPSYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQ 540
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ERGDI
Sbjct: 541 TFKKKWGNDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDI 600
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
NVNSRWLRVKDSLRDDPRYRSVKHE+REMLFNEYI ELKAVEEEKQRESK +KEEQ
Sbjct: 601 NVNSRWLRVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQ 649
BLAST of MS009668 vs. ExPASy TrEMBL
Match:
A0A5D3BYD0 (Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001920 PE=4 SV=1)
HSP 1 Score: 972.6 bits (2513), Expect = 7.8e-280
Identity = 528/661 (79.88%), Postives = 564/661 (85.33%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNS ANGSSIPNLIP+TSPVPPAPS HIHQL P PM+PGPP
Sbjct: 1 MSSASTVSQSVSLPAPPTSNSVANGSSIPNLIPSTSPVPPAPSFHIHQLPPVAPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVSP 120
GMSPS P+VST PA +F P+DS+ STI GPNMH N I+ S RPQICGSYP LT VVSP
Sbjct: 61 GMSPSTPLVSTGPAVLFPPTDSA-STIPGPNMHAIHNPIHPSARPQICGSYPSLTPVVSP 120
Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
PHA+WFQPPQ+G MPRPPF+PYSAS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA
Sbjct: 121 PHAMWFQPPQLGAMPRPPFIPYSASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
Query: 181 ITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGII 240
I V SGHGNQL GNS+IQ D NH LD QK+ Q V HSE+ SL K +DWTAHKTEAGII
Sbjct: 181 IPVPSGHGNQLIGNSLIQTDSNHPELDSQKHTQVVGHSENISLNKHSEDWTAHKTEAGII 240
Query: 241 YYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTK 300
YYYNALTGESTYEKP GF GE +NL Q TSVSMSNLSGTDWVLV+M DGKKYYYNNKTK
Sbjct: 241 YYYNALTGESTYEKPPGFRGEAENLVAQATSVSMSNLSGTDWVLVTMGDGKKYYYNNKTK 300
Query: 301 ISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLR 360
ISSWQIPNEV+E RQQNDEKTKE SAP+PN+NALT+ G+S SI+TPAINTGGREA PLR
Sbjct: 301 ISSWQIPNEVSELRQQNDEKTKELSAPLPNNNALTDLGTSSSSINTPAINTGGREATPLR 360
Query: 361 TVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKD 420
TVGI SSSALDLIKKKLQDSGTPVA+SP+SA T+AQSDVNLPR+ADA VK LQ+EN+KD
Sbjct: 361 TVGIPGSSSALDLIKKKLQDSGTPVASSPISATTVAQSDVNLPRDADATVKALQTENNKD 420
Query: 421 KPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480
KPKDAN DGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP
Sbjct: 421 KPKDANADGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480
Query: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST---- 540
RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + +T
Sbjct: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQT 540
Query: 541 ----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDIN 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ER DIN
Sbjct: 541 FKKKWGNDSRFEALDRKDRENLLNERVLCLKKAAVEKAQALWAASTTSFKSMLQEREDIN 600
Query: 601 VNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQVCKLE 635
VNSRW RVKDSLR+DPRYRSVKHEEREMLFNEYI ELKA EEEKQRESK RKEEQ
Sbjct: 601 VNSRWFRVKDSLREDPRYRSVKHEEREMLFNEYISELKAAEEEKQRESKARKEEQEAVAS 660
BLAST of MS009668 vs. ExPASy TrEMBL
Match:
A0A5A7V0S2 (Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00550 PE=4 SV=1)
HSP 1 Score: 972.2 bits (2512), Expect = 1.0e-279
Identity = 527/655 (80.46%), Postives = 563/655 (85.95%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MSSAST SQS+SLPAPPTSNS ANGSSIPNLIP+TSPVPPAPS HIHQL P PM+PGPP
Sbjct: 1 MSSASTVSQSVSLPAPPTSNSVANGSSIPNLIPSTSPVPPAPSFHIHQLPPVAPMVPGPP 60
Query: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYP-LTHVVSP 120
GMSPS P+VST PA +F P+DS+ STI GPNMH N I+ S RPQICGSYP LT VVSP
Sbjct: 61 GMSPSTPLVSTGPAVLFPPTDSA-STIPGPNMHAIHNPIHPSARPQICGSYPSLTPVVSP 120
Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
PHA+WFQPPQ+G MPRPPF+PYSAS+HGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA
Sbjct: 121 PHAMWFQPPQLGAMPRPPFIPYSASYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
Query: 181 ITVSSGHGNQLTGNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGII 240
I V SGHGNQL GNS+IQ D NH LD QK+ Q V HSE+ SL K +DWTAHKTEAGII
Sbjct: 181 IPVPSGHGNQLIGNSLIQTDSNHPELDSQKHTQVVGHSENISLNKHSEDWTAHKTEAGII 240
Query: 241 YYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTK 300
YYYNALTGESTYEKP GF GE +NL Q TSVSMSNLSGTDWVLV+M DGKKYYYNNKTK
Sbjct: 241 YYYNALTGESTYEKPPGFRGEAENLVAQATSVSMSNLSGTDWVLVTMGDGKKYYYNNKTK 300
Query: 301 ISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPLR 360
ISSWQIPNEV+E RQQNDEKTKE SAP+PN+NALT+ G+S SI+TPAINTGGREA PLR
Sbjct: 301 ISSWQIPNEVSELRQQNDEKTKELSAPLPNNNALTDLGTSSSSINTPAINTGGREATPLR 360
Query: 361 TVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSKD 420
TVGI SSSALDLIKKKLQDSGTPVA+SP+SA T+AQSDVNLPR+ADA VK LQ+EN+KD
Sbjct: 361 TVGIPGSSSALDLIKKKLQDSGTPVASSPISATTVAQSDVNLPRDADATVKALQTENNKD 420
Query: 421 KPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480
KPKDAN DGNVSD+SSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP
Sbjct: 421 KPKDANADGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDP 480
Query: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST---- 540
RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASE + +T
Sbjct: 481 RFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQT 540
Query: 541 ----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDIN 600
L V+CLKKAAVEKAQALWAASTTSFKSML+ER DIN
Sbjct: 541 FKKKWGNDSRFEALDRKDRENLLNERVLCLKKAAVEKAQALWAASTTSFKSMLQEREDIN 600
Query: 601 VNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEEQ 629
VNSRW RVKDSLR+DPRYRSVKHEEREMLFNEYI ELKA EEEKQRESK RKEEQ
Sbjct: 601 VNSRWFRVKDSLREDPRYRSVKHEEREMLFNEYISELKAAEEEKQRESKARKEEQ 654
BLAST of MS009668 vs. TAIR 10
Match:
AT3G19840.1 (pre-mRNA-processing protein 40C )
HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-128
Identity = 305/655 (46.56%), Postives = 398/655 (60.76%), Query Frame = 0
Query: 1 MSSASTASQSLSLPAPPTSNSAANGSSIPNLIPATSPVPPAPSLHIHQLVPGTPMIPGPP 60
MS AST S S+P T+ N ++ N+ +P+P A + + G P PP
Sbjct: 49 MSIASTGFVSQSVPYSVTAQWGTNAAASSNV----NPIPQASPM-LANAPFGRPGTLAPP 108
Query: 61 GMSPSIPVVSTSPATMFSPSDSSGSTISGPNMHPTPNSINTSVRPQICGSYPLTH-VVSP 120
G+ S P P + ST P M P +N + P + YP H +
Sbjct: 109 GLMTSPPAF---------PGSNPFSTTPRPGMSAGPAQMNPGIHPHM---YPPYHSLPGT 168
Query: 121 PHAIWFQPPQMGGMPRPPFLPYSASFHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASA 180
P +W QPP MGG+PR PFL + +F G PFP RG+ P++P P G +P+
Sbjct: 169 PQGMWLQPPSMGGIPRAPFLSHPTTFPGSYPFPVRGIS-PNLPYSGSHPLGASPMGSVGN 228
Query: 181 ITVSSGHGNQLT-GNSVIQMDLNHSGLDGQKYAQGVVHSESNSLIKRLDDWTAHKTEAGI 240
+ G ++ G ++ SG+D + +Q V + RLD WTAHK+EAG+
Sbjct: 229 VHALPGRQPDISPGRKTEEL----SGIDDRAGSQLVGN--------RLDAWTAHKSEAGV 288
Query: 241 IYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKT 300
+YYYN++TG+STYEKP GF GEPD + VQP VSM +L GTDW LVS +DGKKYYYNNKT
Sbjct: 289 LYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWALVSTNDGKKYYYNNKT 348
Query: 301 KISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISISTPAINTGGREAIPL 360
K+SSWQIP EV + ++ +E+ E A VP+++ LTE+GS S+S PAI+ GGR+A L
Sbjct: 349 KVSSWQIPAEVKDFGKKLEERAMESVASVPSAD-LTEKGSDLTSLSAPAISNGGRDAASL 408
Query: 361 RTVGISASSSALDLIKKKLQDSGTPVAASPVSAPTIAQSDVNLPREADAAVKGLQSENSK 420
+T SSALDL+KKKL DSG PV+++ S+ N + + G +S NS
Sbjct: 409 KTTNF--GSSALDLVKKKLHDSGMPVSST-------ITSEANSGKTTEVTPSG-ESGNST 468
Query: 421 DKPKDANGDGNVSDTSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFD 480
K KDA G G +SD+SSDSED DSGP+ E+ QFKEMLKERG+APFSKW+KELPKI+FD
Sbjct: 469 GKVKDAPGAGALSDSSSDSEDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKELPKIIFD 528
Query: 481 PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLST--- 540
PRFKAIPS+S RRSLFE YVKTRAEEER+EKRAA KAAIEGF+QLLD AS + T
Sbjct: 529 PRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLDDASTDIDQHTDYR 588
Query: 541 -----------------------LIILVICLKKAAVEKAQALWAASTTSFKSMLRERGDI 600
L V+ LK++A +KAQ + AA+ + FK+MLRER +I
Sbjct: 589 AFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTMLRER-EI 648
Query: 601 NVNSRWLRVKDSLRDDPRYRSVKHEEREMLFNEYIFELKAVEEEKQRESKTRKEE 628
++NS W +VKDSLR++PRYRSV HE+RE+ + EYI ELKA + E K R EE
Sbjct: 649 SINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDEE 661
BLAST of MS009668 vs. TAIR 10
Match:
AT1G44910.1 (pre-mRNA-processing protein 40A )
HSP 1 Score: 100.1 bits (248), Expect = 6.6e-21
Identity = 121/462 (26.19%), Postives = 196/462 (42.42%), Query Frame = 0
Query: 207 GQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAV 266
GQ+ V N + DW H + G YYYN T +S +EKP
Sbjct: 168 GQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELM-------- 227
Query: 267 QPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAP 326
T + ++ S T W + +GKKYYYN TK S W IP ++ +R+Q +++ S
Sbjct: 228 --TPLERADAS-TVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS-- 287
Query: 327 VPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSG--TPV 386
L+E GS+P+S + A+ T + ++SSAL +G PV
Sbjct: 288 ------LSEAGSTPLSHHAA---SSSDLAVSTVTSVVPSTSSALTGHSSSPIQAGLAVPV 347
Query: 387 AASPVSAP-------------TIAQSDVNLPREADAAVKGLQSEN--SKDKPKDANGDGN 446
P AP T + D R AD + G ++N +++K NG N
Sbjct: 348 TRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKAN 407
Query: 447 VSDTSSDSEDVDSG---PTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPS 506
+S + D +V+ T ++ FK +L+ V W++ L +IV D R+ A+ +
Sbjct: 408 LS-PAGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRT 467
Query: 507 YSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEV---LSLSTLIIL---- 566
R+ F Y+ R + E +E+R QK A E F ++L+ E+ L S + L
Sbjct: 468 LGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFEND 527
Query: 567 -------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLR 623
++ L++ EKA ++ L I ++W +
Sbjct: 528 QRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRK 587
BLAST of MS009668 vs. TAIR 10
Match:
AT1G44910.2 (pre-mRNA-processing protein 40A )
HSP 1 Score: 100.1 bits (248), Expect = 6.6e-21
Identity = 121/462 (26.19%), Postives = 196/462 (42.42%), Query Frame = 0
Query: 207 GQKYAQGVVHSESNSLIKRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAV 266
GQ+ V N + DW H + G YYYN T +S +EKP
Sbjct: 168 GQQTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELM-------- 227
Query: 267 QPTSVSMSNLSGTDWVLVSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAP 326
T + ++ S T W + +GKKYYYN TK S W IP ++ +R+Q +++ S
Sbjct: 228 --TPLERADAS-TVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTS-- 287
Query: 327 VPNSNALTEQGSSPISISTPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSG--TPV 386
L+E GS+P+S + A+ T + ++SSAL +G PV
Sbjct: 288 ------LSEAGSTPLSHHAA---SSSDLAVSTVTSVVPSTSSALTGHSSSPIQAGLAVPV 347
Query: 387 AASPVSAP-------------TIAQSDVNLPREADAAVKGLQSEN--SKDKPKDANGDGN 446
P AP T + D R AD + G ++N +++K NG N
Sbjct: 348 TRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKAN 407
Query: 447 VSDTSSDSEDVDSG---PTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPS 506
+S + D +V+ T ++ FK +L+ V W++ L +IV D R+ A+ +
Sbjct: 408 LS-PAGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRT 467
Query: 507 YSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEV---LSLSTLIIL---- 566
R+ F Y+ R + E +E+R QK A E F ++L+ E+ L S + L
Sbjct: 468 LGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFEND 527
Query: 567 -------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINVNSRWLR 623
++ L++ EKA ++ L I ++W +
Sbjct: 528 QRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRK 587
BLAST of MS009668 vs. TAIR 10
Match:
AT3G19670.1 (pre-mRNA-processing protein 40B )
HSP 1 Score: 78.6 bits (192), Expect = 2.1e-14
Identity = 115/473 (24.31%), Postives = 192/473 (40.59%), Query Frame = 0
Query: 224 KRLDDWTAHKTEAGIIYYYNALTGESTYEKPSGFTGEPDNLAVQPTSVSMSNLSGTDWVL 283
K L DW H + G Y++N T +ST+EKP V+ ++ + TDW
Sbjct: 204 KALTDWVEHTSADGRKYFFNKRTKKSTWEKP-----------VELMTLFERADARTDWKE 263
Query: 284 VSMSDGKKYYYNNKTKISSWQIPNEVTESRQQNDEKTKERSAPVPNSNALTEQGSSPISI 343
S DG+KYYYN TK S+W +P E+ R+Q + S P++ + + +S +
Sbjct: 264 HSSPDGRKYYYNKITKQSTWTMPEEMKIVREQ----AEIASVQGPHAEGIID--ASEVLT 323
Query: 344 STPAINTGGREAIPLRTVGISASSSALDLIKKKLQDSGTPVAASPV-------------- 403
+ +T +P +T S L L Q + P ++SPV
Sbjct: 324 RSDTASTAAPTGLPSQT-STSEGVEKLTLTSDLKQPASVPGSSSPVENVDRVQMSADETS 383
Query: 404 -----------SAPTIAQSDVNLPREADAAVKGLQSENSKDKPKDAN-GDGNVSDTSS-- 463
S P S L + + +V G ++ K+AN G G+ S
Sbjct: 384 QLCDTSETDGLSVPVTETSAATLVEKDEISV-GNSGDSDDMSTKNANQGSGSGPKESQKP 443
Query: 464 --DSEDVDSGPTNEQL-------------IIQFKEMLKERGVAPFSKWDKELPKIVFDPR 523
+SE V+S +Q+ + FK +LK V W++ + +I+ D R
Sbjct: 444 MVESEKVESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREIINDKR 503
Query: 524 FKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEVLSLS----TL 583
+ A+ + R+ F ++ +E+ A QK E FK++L+ E+ + T+
Sbjct: 504 YGALRTLGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRWSKTV 563
Query: 584 IIL----------------------VICLKKAAVEKAQALWAASTTSFKSMLRERGDINV 628
+ V LK+ KA + +K L I
Sbjct: 564 TMFEDDERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCNFIKP 623
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022146153.1 | 0.0e+00 | 94.50 | pre-mRNA-processing protein 40C [Momordica charantia] | [more] |
XP_023547625.1 | 1.0e-289 | 82.77 | pre-mRNA-processing protein 40C [Cucurbita pepo subsp. pepo] >XP_023547626.1 pre... | [more] |
XP_022953473.1 | 2.9e-289 | 82.77 | pre-mRNA-processing protein 40C [Cucurbita moschata] >XP_022953474.1 pre-mRNA-pr... | [more] |
KAG6575389.1 | 5.6e-288 | 82.16 | Pre-mRNA-processing protein 40C, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022992104.1 | 4.4e-285 | 81.86 | pre-mRNA-processing protein 40C [Cucurbita maxima] >XP_022992105.1 pre-mRNA-proc... | [more] |
Match Name | E-value | Identity | Description | |
Q9LT25 | 2.3e-127 | 46.56 | Pre-mRNA-processing protein 40C OS=Arabidopsis thaliana OX=3702 GN=PRP40C PE=1 S... | [more] |
B6EUA9 | 9.3e-20 | 26.19 | Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 S... | [more] |
O14776 | 5.1e-18 | 24.96 | Transcription elongation regulator 1 OS=Homo sapiens OX=9606 GN=TCERG1 PE=1 SV=2 | [more] |
Q8CGF7 | 1.4e-15 | 24.26 | Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=... | [more] |
Q6NWY9 | 7.1e-12 | 22.34 | Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CXT9 | 0.0e+00 | 94.50 | pre-mRNA-processing protein 40C OS=Momordica charantia OX=3673 GN=LOC111015435 P... | [more] |
A0A6J1GNF1 | 1.4e-289 | 82.77 | pre-mRNA-processing protein 40C OS=Cucurbita moschata OX=3662 GN=LOC111456014 PE... | [more] |
A0A6J1JUS6 | 2.1e-285 | 81.86 | pre-mRNA-processing protein 40C OS=Cucurbita maxima OX=3661 GN=LOC111488550 PE=4... | [more] |
A0A5D3BYD0 | 7.8e-280 | 79.88 | Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5A7V0S2 | 1.0e-279 | 80.46 | Pre-mRNA-processing protein 40C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |