MS009620 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAGTTTTCTTCACAAGCTATGGGACGAAACCGTTGCAGGCCCCACGCCGGACACCGGCCTCGGAAAGCTACGCAAGTATGACTCCATTTCGCCCTCCGAACTGCCTCCGATCAAGATTTCCGATGAGATTCCGGTAACTCGGAGCATCACCATTCTCAGGAGGAACTCCGATTTCAGGACCTCCTCGGAAGACCGCCACCGGAGGATGCCGGATTCTATCGCCGGAATATCCTCCCCGCGGACGCCTGTTACTCGTGAGTTTATCTGTTTTTCGATCTCTCGGATCGATCTTTTTTTTTTTTTTTTCTTTTGACTTGCATTTATATGAATATGTATTTAGAAATTGAAGAAATAACACTATCGATGGAATGATATTTGATTCGAAATTGGAATCTTAAATTCGATGGACCAGTTCATAATTATATGAGTAATTTTGTTTCTCGTATTCGATGCAGCGGGGACGCCTGAATTTGATCTGAAGAGATTTTCATGGAGAAAATCGTCGGCTGAATCATCGGAACATGACGCT ATGACTAGTTTTCTTCACAAGCTATGGGACGAAACCGTTGCAGGCCCCACGCCGGACACCGGCCTCGGAAAGCTACGCAAGTATGACTCCATTTCGCCCTCCGAACTGCCTCCGATCAAGATTTCCGATGAGATTCCGGTAACTCGGAGCATCACCATTCTCAGGAGGAACTCCGATTTCAGGACCTCCTCGGAAGACCGCCACCGGAGGATGCCGGATTCTATCGCCGGAATATCCTCCCCGCGGACGCCTGTTACTCCGGGGACGCCTGAATTTGATCTGAAGAGATTTTCATGGAGAAAATCGTCGGCTGAATCATCGGAACATGACGCT ATGACTAGTTTTCTTCACAAGCTATGGGACGAAACCGTTGCAGGCCCCACGCCGGACACCGGCCTCGGAAAGCTACGCAAGTATGACTCCATTTCGCCCTCCGAACTGCCTCCGATCAAGATTTCCGATGAGATTCCGGTAACTCGGAGCATCACCATTCTCAGGAGGAACTCCGATTTCAGGACCTCCTCGGAAGACCGCCACCGGAGGATGCCGGATTCTATCGCCGGAATATCCTCCCCGCGGACGCCTGTTACTCCGGGGACGCCTGAATTTGATCTGAAGAGATTTTCATGGAGAAAATCGTCGGCTGAATCATCGGAACATGACGCT MTSFLHKLWDETVAGPTPDTGLGKLRKYDSISPSELPPIKISDEIPVTRSITILRRNSDFRTSSEDRHRRMPDSIAGISSPRTPVTPGTPEFDLKRFSWRKSSAESSEHDA Homology
BLAST of MS009620 vs. NCBI nr
Match: XP_022151606.1 (dormancy-associated protein homolog 4-like [Momordica charantia]) HSP 1 Score: 224.9 bits (572), Expect = 3.3e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of MS009620 vs. NCBI nr
Match: XP_023514880.1 (dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 167.9 bits (424), Expect = 4.8e-38 Identity = 82/110 (74.55%), Postives = 94/110 (85.45%), Query Frame = 0
BLAST of MS009620 vs. NCBI nr
Match: KAG6593570.1 (Dormancy-associated protein-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025915.1 Dormancy-associated protein-like 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.4 bits (420), Expect = 1.4e-37 Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 0
BLAST of MS009620 vs. NCBI nr
Match: XP_022999999.1 (dormancy-associated protein homolog 4-like [Cucurbita maxima]) HSP 1 Score: 162.9 bits (411), Expect = 1.6e-36 Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 0
BLAST of MS009620 vs. NCBI nr
Match: XP_038896212.1 (dormancy-associated protein homolog 4-like [Benincasa hispida]) HSP 1 Score: 160.6 bits (405), Expect = 7.7e-36 Identity = 82/111 (73.87%), Postives = 93/111 (83.78%), Query Frame = 0
BLAST of MS009620 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.9e-16 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 0
BLAST of MS009620 vs. ExPASy Swiss-Prot
Match: B9DGG8 (Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.1e-06 Identity = 36/96 (37.50%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of MS009620 vs. ExPASy Swiss-Prot
Match: Q8LD26 (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04 Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0
BLAST of MS009620 vs. ExPASy Swiss-Prot
Match: Q05349 (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.1e-04 Identity = 33/96 (34.38%), Postives = 39/96 (40.62%), Query Frame = 0
BLAST of MS009620 vs. ExPASy TrEMBL
Match: A0A6J1DF61 (dormancy-associated protein homolog 4-like OS=Momordica charantia OX=3673 GN=LOC111019516 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of MS009620 vs. ExPASy TrEMBL
Match: A0A6J1KIP1 (dormancy-associated protein homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111494315 PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 7.5e-37 Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 0
BLAST of MS009620 vs. ExPASy TrEMBL
Match: A0A6J1HKD6 (dormancy-associated protein homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111464350 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 7.8e-34 Identity = 79/110 (71.82%), Postives = 87/110 (79.09%), Query Frame = 0
BLAST of MS009620 vs. ExPASy TrEMBL
Match: A0A0A0K9D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448700 PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30 Identity = 74/113 (65.49%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of MS009620 vs. ExPASy TrEMBL
Match: A0A5A7UTX0 (Dormancy-associated protein-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001500 PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29 Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of MS009620 vs. TAIR 10
Match: AT1G54070.1 (Dormancy/auxin associated family protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 0
BLAST of MS009620 vs. TAIR 10
Match: AT1G28330.1 (dormancy-associated protein-like 1 ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 36/96 (37.50%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of MS009620 vs. TAIR 10
Match: AT1G28330.3 (dormancy-associated protein-like 1 ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 36/96 (37.50%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of MS009620 vs. TAIR 10
Match: AT1G28330.2 (dormancy-associated protein-like 1 ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 36/96 (37.50%), Postives = 45/96 (46.88%), Query Frame = 0
BLAST of MS009620 vs. TAIR 10
Match: AT1G28330.4 (dormancy-associated protein-like 1 ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 36/96 (37.50%), Postives = 45/96 (46.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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