MS009613 (gene) Bitter gourd (TR) v1

Overview


Name	MS009613
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 62-like
Location	scaffold813: 2728402 .. 2731458 (-)
RNA-Seq Expression	MS009613
Synteny	MS009613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTCTGGGCGTTTCGAACCCACTCCTCGTCGCTCTGAACTAGAAGAAATTATCGACGACGATGGAGAATCTGACGATGAGTATGATTCTGATGATTCGGAATGTGATCCGAGTTACTCCATTGAGGAAAAATCCAATTCCAAGATTTCAAGGACCTCGATCAGGAAGAAATCTAAGCCTTTGTTAGTATTTCAATCTCTTGACAGATCTCTGACCTTTTTTTCATACGATCAACTATTATATTTGAATAATCGATGTAGTGCTGGATTTCATGAGGTTGAGTGGATTTGCAGGAATGATGTCGATATGGAACTGATCGCAGAAGCAGACATGGATGGTGCGGCGCCGAATGTTACGATACTAAATGAAAATGATGAAAAAGATATCCACGAAGTGCTACAGATCATTAAAGGTCAGTCGAAGATTTTGAATGATTTCGTATATATTCCCCTCTGGTTCATTTATGAACAGAGAAGGCCAGTAGGAATTTGAACTCTTTAGGTATTTTTGAAGTATTATATATTTGTGCCGAGTGTAAAGTTTTCTTTAACTCATTAGATGTGTTCCTTACTGGATGTTATATACATAGTCGAGAGGAGTAAAGCACTTGAAAATGTTACCCTTCTCTTGACCATATGAACTTAGAAAACACAAATTAACATTGTGTTTAATCTCTTCTTGTTCCTTACATGACATATTTCTCCATCATCCTTTGGCCTCAGCTGGCAAGCTAGAGAAACTCAAGGTAGAGCAATGTAAGGTTTACCTGAGAAAGAATGGATTGAGACTGACAGGAACTAAAGATGTACTCATTCAGCGCATCAATGAGCATTTGGAGTAAGTTTGTATTCTATGGCAGTATAAAAATGGTCTTGGAAGGAGTCGATGGCTAACGGCACCCTTCTTTTCTTTTAAGGATTTTAAATGGTGGAGGGGCGAAGAAATATCCAGATTATAGCTTTATATTGGATTGTAAAGGTATGTGATCCTAGTCACATGATAAGGATTCTATAACGACGACAAGAATATGGTTGTTTAAACATGTAGAACAATTTATCTGTTTTGCTCATTTTAATGTGTTACTGAGTAATGATGAAGAGGTGCTTTGATGGTTGATCATTAAACTTACTTTTGGCTTGTCAAATTGTCTACTGAACAGGAGATTTTTGAGGAATCCTTTTATCTTGTCTTGTTCTGCCCACCTATAATACATTGTATCTTCTTGTTATGTGGTGATGTGACTCAGTCCTCATAACACCAACATACTTGAATGGATATACTTATCGATCTCTGCTCTCATTTTTTATATTCATTTGATACAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAGATGTAAGAATTTTTATTAATGTATCTCATTCCAGTTTTGTTTTACAAAAAGATTAGTTTATCTGTGAGAATGATGGAGATTAATATTCTCACTTGGTAGCTAGATGCAACGGAATTTCCTTTTCCCAGATACATAATCTTTTATACTTCCATGGATGGTTTCTTATTTACAAATTCCTCATTCAGGTACAATGTAGCATCTAGGAGCTCCATAGGTCCTTCATGTGGAACAAGAACTGTTGCAGGTCGCATTGTGAAAGAAAGCTATGGTGCTTCTAAACAACAACATACATTTACGGTGAGTGCAATGCATAATTTAGTACATTGTTGCAAATACAGTGGAAAAGAAGGCGCAACAATGCTTTTAGACGCAATATTTGAACTGTCAGATATGCCTGCGACCAGTTTTGGAAATTGGAGCAAAAATGACTTAGGTTGTATCAGTTCTGGTGGAACCATTGCTCAATAGCAACACTATTTGATTTTGTTTTAATCATATATATCTGATCCTCTTCTTTCTAGCTTAGAAGGCCAACGCCACCAAAGGTGACTTTTAATAGTAATTTAAGATGAATGACGACCAATGATGAAACTTAGTTATTTTTTCATTTAAGGGTTGATGGGTCTCATTAACTTTTGGTAGTTATCATCTTGAATTATGTTACCGTTCAGAATTATTTACTGCCCTCTTATCTACTTTTCTGAACAGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCACTTCCTCCACTCCATCCCCTTTTAATCAAGGGTCGAAACCTTTACCGGATGAAGACTCTGAGACAGGTTACAGTTCCACATTCTTCCTTTGACCATTCGTTTATAGTTTGAACTTTTCTTTAAAATAACCCATGTTTTCAAATTTGTAGACTTGGGAAGACGAAGAAGAAAGGCAGAAAGTTTTAATGGAAAAACATGCCAGGGGATCACTTGCAAGATCAAATAGGGAAGCACGTGTGTTAGAGAAAGAAAAAAGAAAAACGCACAAAGATAATAGGTATTATTTTGCATCAAACAACCTTGAAAAATGACTTAAGCATCGATTTCTCCATGTGGATAAGACAATATTGGATTTGTTATACTTCAGGATATCAAGGAGAGAAGGATTTAGTGAGAATCCTTCCCAGTCAAATCTAACTTCAGCAGGAACAATGTTAGCTGAATCCATGGTAAGTTTATCCGTTGATTCAAGAAAAATGGGGATTCATCAACACCAGCAAGGACCTCTCTGCGGTAATCCAGGAAAACCACTTCAACGTCATCAGTCAGAAAACAGAACTATGCAAACAAAATCAGATCTGTTCATTAACCACAGGAAACAGCCATTTCAAGAGAATTACTTGACCCAACCCCGAATCAAAGTGGATCCTCCGGCAAGCTACAACACACAGCCCCGAATTTACAGGGCTGATCATGCTGCTTCTGTTAACAAGGTTCTTGATGGTACAAACCACACATCCTGGAATCATTATAGACCACCAATGGGCGTTTATCATCATCCTATAGTGAAGAATCAACCTGACAAGCAACAACGATGCCGTTATTATGCGGAAGGGAGATGTTACTTCGGGGAGAACTGTAAGTTCTCTCATGAAATGATAACAGAGCGGCGGGACGAAGAAAGATGGCGCCACACGCATCATGCTCGCCTTTGTCGG

mRNA sequence

ATGGCTTTTTCTGGGCGTTTCGAACCCACTCCTCGTCGCTCTGAACTAGAAGAAATTATCGACGACGATGGAGAATCTGACGATGAGTATGATTCTGATGATTCGGAATGTGATCCGAGTTACTCCATTGAGGAAAAATCCAATTCCAAGATTTCAAGGACCTCGATCAGGAAGAAATCTAAGCCTTTGAATGATGTCGATATGGAACTGATCGCAGAAGCAGACATGGATGGTGCGGCGCCGAATGTTACGATACTAAATGAAAATGATGAAAAAGATATCCACGAAGTGCTACAGATCATTAAAGCTGGCAAGCTAGAGAAACTCAAGGTAGAGCAATGTAAGGTTTACCTGAGAAAGAATGGATTGAGACTGACAGGAACTAAAGATGTACTCATTCAGCGCATCAATGAGCATTTGGAGATTTTAAATGGTGGAGGGGCGAAGAAATATCCAGATTATAGCTTTATATTGGATTGTAAAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAGATGTACAATGTAGCATCTAGGAGCTCCATAGGTCCTTCATGTGGAACAAGAACTGTTGCAGGTCGCATTGTGAAAGAAAGCTATGGTGCTTCTAAACAACAACATACATTTACGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCACTTCCTCCACTCCATCCCCTTTTAATCAAGGGTCGAAACCTTTACCGGATGAAGACTCTGAGACAGACTTGGGAAGACGAAGAAGAAAGGCAGAAAGTTTTAATGGAAAAACATGCCAGGGGATCACTTGCAAGATCAAATAGGGAAGCACGTGTGTTAGAGAAAGAAAAAAGAAAAACGCACAAAGATAATAGGATATCAAGGAGAGAAGGATTTAGTGAGAATCCTTCCCAGTCAAATCTAACTTCAGCAGGAACAATGTTAGCTGAATCCATGGTAAGTTTATCCGTTGATTCAAGAAAAATGGGGATTCATCAACACCAGCAAGGACCTCTCTGCGGTAATCCAGGAAAACCACTTCAACGTCATCAGTCAGAAAACAGAACTATGCAAACAAAATCAGATCTGTTCATTAACCACAGGAAACAGCCATTTCAAGAGAATTACTTGACCCAACCCCGAATCAAAGTGGATCCTCCGGCAAGCTACAACACACAGCCCCGAATTTACAGGGCTGATCATGCTGCTTCTGTTAACAAGGTTCTTGATGGTACAAACCACACATCCTGGAATCATTATAGACCACCAATGGGCGTTTATCATCATCCTATAGTGAAGAATCAACCTGACAAGCAACAACGATGCCGTTATTATGCGGAAGGGAGATGTTACTTCGGGGAGAACTGTAAGTTCTCTCATGAAATGATAACAGAGCGGCGGGACGAAGAAAGATGGCGCCACACGCATCATGCTCGCCTTTGTCGG

Coding sequence (CDS)

ATGGCTTTTTCTGGGCGTTTCGAACCCACTCCTCGTCGCTCTGAACTAGAAGAAATTATCGACGACGATGGAGAATCTGACGATGAGTATGATTCTGATGATTCGGAATGTGATCCGAGTTACTCCATTGAGGAAAAATCCAATTCCAAGATTTCAAGGACCTCGATCAGGAAGAAATCTAAGCCTTTGAATGATGTCGATATGGAACTGATCGCAGAAGCAGACATGGATGGTGCGGCGCCGAATGTTACGATACTAAATGAAAATGATGAAAAAGATATCCACGAAGTGCTACAGATCATTAAAGCTGGCAAGCTAGAGAAACTCAAGGTAGAGCAATGTAAGGTTTACCTGAGAAAGAATGGATTGAGACTGACAGGAACTAAAGATGTACTCATTCAGCGCATCAATGAGCATTTGGAGATTTTAAATGGTGGAGGGGCGAAGAAATATCCAGATTATAGCTTTATATTGGATTGTAAAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAGATGTACAATGTAGCATCTAGGAGCTCCATAGGTCCTTCATGTGGAACAAGAACTGTTGCAGGTCGCATTGTGAAAGAAAGCTATGGTGCTTCTAAACAACAACATACATTTACGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCACTTCCTCCACTCCATCCCCTTTTAATCAAGGGTCGAAACCTTTACCGGATGAAGACTCTGAGACAGACTTGGGAAGACGAAGAAGAAAGGCAGAAAGTTTTAATGGAAAAACATGCCAGGGGATCACTTGCAAGATCAAATAGGGAAGCACGTGTGTTAGAGAAAGAAAAAAGAAAAACGCACAAAGATAATAGGATATCAAGGAGAGAAGGATTTAGTGAGAATCCTTCCCAGTCAAATCTAACTTCAGCAGGAACAATGTTAGCTGAATCCATGGTAAGTTTATCCGTTGATTCAAGAAAAATGGGGATTCATCAACACCAGCAAGGACCTCTCTGCGGTAATCCAGGAAAACCACTTCAACGTCATCAGTCAGAAAACAGAACTATGCAAACAAAATCAGATCTGTTCATTAACCACAGGAAACAGCCATTTCAAGAGAATTACTTGACCCAACCCCGAATCAAAGTGGATCCTCCGGCAAGCTACAACACACAGCCCCGAATTTACAGGGCTGATCATGCTGCTTCTGTTAACAAGGTTCTTGATGGTACAAACCACACATCCTGGAATCATTATAGACCACCAATGGGCGTTTATCATCATCCTATAGTGAAGAATCAACCTGACAAGCAACAACGATGCCGTTATTATGCGGAAGGGAGATGTTACTTCGGGGAGAACTGTAAGTTCTCTCATGAAATGATAACAGAGCGGCGGGACGAAGAAAGATGGCGCCACACGCATCATGCTCGCCTTTGTCGG

Protein sequence

MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKSKPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRKNGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMYNVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFSENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTKSDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWNHYRPPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEMITERRDEERWRHTHHARLCR

Homology

[Close]

BLAST of MS009613 vs. NCBI nr
Match: XP_022145492.1 (zinc finger CCCH domain-containing protein 62-like [Momordica charantia])

HSP 1 Score: 954.9 bits (2467), Expect = 2.6e-274
Identity = 478/482 (99.17%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS
Sbjct: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KPLNDVDMELIAEADMD AAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK
Sbjct: 61  KPLNDVDMELIAEADMDDAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS
Sbjct: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK
Sbjct: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360

Query: 361 SDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWNHY 420
           SDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWN Y
Sbjct: 361 SDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWNXY 420

Query: 421 RPPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEMITERRDEERWRHTHHARL 480
           R PMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEM+TERRDEERWRHTHHARL
Sbjct: 421 RLPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEMMTERRDEERWRHTHHARL 480

Query: 481 CR 483
           CR
Sbjct: 481 CR 482

[Close]

BLAST of MS009613 vs. NCBI nr
Match: XP_038899462.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 663.3 bits (1710), Expect = 1.6e-186
Identity = 357/496 (71.98%), Postives = 403/496 (81.25%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFS   E  P R +LEE+IDD+ +SDDEY S DSECDPSY IE+K+NSK+SRTSIRKKS
Sbjct: 1   MAFSDNLETNPSRFDLEELIDDNCDSDDEYHSHDSECDPSYRIEKKTNSKVSRTSIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KPL  VDM LI + D+D  APNV ILNENDEKDI EVL I+K GKLEKLKVEQCK YLRK
Sbjct: 61  KPLEIVDMNLIVDMDIDDVAPNVPILNENDEKDIREVLSIVKTGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRI EHLEILN GG  KYP+YSFI++CKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRIKEHLEILNSGGENKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSSIGPS GTRTV GRIVKESYG+SKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSRGTRTVVGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYR+KT RQTWEDE ERQKVLMEKHARGSLARSNRE RV+E+EKRKTHK+NR SR EGF 
Sbjct: 241 LYRIKTFRQTWEDEGERQKVLMEKHARGSLARSNRETRVVEREKRKTHKENRKSRNEGFK 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           +NPSQSNL+SAGT L +SM  LSVDSRK+ +HQHQ+  L GN GK  Q  Q EN + QTK
Sbjct: 301 DNPSQSNLSSAGTTLVQSMEKLSVDSRKV-VHQHQEEQLFGNSGKAFQHQQPENPSNQTK 360

Query: 361 SDLFINHRKQPF--QENYLTQPRIKVDPPASYN-TQPRIYRADHAASVNKVLDGTNHTSW 420
           SDLFI+H + PF  Q NY +QP++K +  A Y+  QP IY+ADHAASVN+VLD TN +SW
Sbjct: 361 SDLFIDHNRLPFQHQNNYYSQPQMKANHSACYSIMQPIIYKADHAASVNEVLDNTNRSSW 420

Query: 421 N-HY-RPPMGVYH-HPIVKNQPD---KQQRCRYYAEGRCYFGENCKFSHEMITE--RRDE 480
           + HY R PMG  + +P V        KQQ+CR+YA GRCY+GENCKFSHEM  +  RR++
Sbjct: 421 DYHYSRLPMGRMNLYPRVNQTAQEGYKQQQCRHYAVGRCYYGENCKFSHEMTRDFVRREK 480

Query: 481 ERWRHTH---HARLCR 483
           ER  H H   +AR CR
Sbjct: 481 ERLGHHHIHQNARHCR 495

[Close]

BLAST of MS009613 vs. NCBI nr
Match: KAG6575426.1 (Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 652.9 bits (1683), Expect = 2.2e-183
Identity = 359/508 (70.67%), Postives = 393/508 (77.36%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSG F   PRR ELEE+IDD GESDD+ DSDDSECDPSYS EE +NSK+SR SIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KP    D ELIA+A +D   P V  LNENDEKDI EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGG KKYP+YSF ++CKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKT+RQTWEDE ERQKVLMEKHARGSLARS REARV+EKEKRKTH +NR SRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPSQSNL+SAGTMLAE+MV LSVD+RK  +H HQ+ PL GN G+P ++H   N T QTK
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARK-AVHPHQERPLFGNSGEPPRQH---NPTKQTK 360

Query: 361 SDLFINHRKQPF---------QENYLTQPRIKVD-PPASYNTQPRIYRADHAASVNKVLD 420
           SD+FI+H ++P+         Q NY +QP++K D PP SYN  P IYRADH AS      
Sbjct: 361 SDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKPDPPPVSYNVHPSIYRADHPAS------ 420

Query: 421 GTNHTSWNHYRPPMGVYH-HPIVKNQPD---KQQRCRYYAEGRCYFGENCKFSHEMITE- 480
                     R  MG  + +P V        KQQRCRYYA GRC++GENCKFSHEM  + 
Sbjct: 421 ----------RLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQDF 480

Query: 481 --RRDEERWRHTHH---------ARLCR 483
             R  E   RH HH         ARLCR
Sbjct: 481 AGREKERLGRHHHHHHHHQMHQNARLCR 488

[Close]

BLAST of MS009613 vs. NCBI nr
Match: XP_022954256.1 (zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata])

HSP 1 Score: 651.7 bits (1680), Expect = 4.8e-183
Identity = 358/506 (70.75%), Postives = 393/506 (77.67%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSG F   PRR ELEE+IDD GESDD+ DSDDSECDPSYS EE +NSK+SR SIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KP    D ELIA+A +D   P V  LNENDEKDI EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGG KKYP+YSF ++CKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKT+RQTWEDE ERQKVLMEKHARGSLARS REARV+EKEKRKTH +NR SRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPSQSNL+SAGTMLAE+MV LSVD+RK  +H HQ+ PL GN G+P ++H   N T QTK
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARK-AVHPHQERPLFGNSGEPPRQH---NPTKQTK 360

Query: 361 SDLFINHRKQPF---------QENYLTQPRIKVD-PPASYNTQPRIYRADHAASVNKVLD 420
           SD+FI+H ++P+         Q NY +QP++K D PP SYN  P IYRAD+ AS      
Sbjct: 361 SDVFIDHSRRPYQLQPMMNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADYPAS------ 420

Query: 421 GTNHTSWNHYRPPMGVYH-HPIVKNQPD---KQQRCRYYAEGRCYFGENCKFSHEMITE- 480
                     R  MG  + +P V        KQQRCRYYA GRC++GENCKFSHEM  + 
Sbjct: 421 ----------RLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQDF 480

Query: 481 --RRDEERWRHTHH-------ARLCR 483
             R  E   RH HH       ARLCR
Sbjct: 481 AGREKERLGRHHHHHHQMHQNARLCR 486

[Close]

BLAST of MS009613 vs. NCBI nr
Match: XP_023548827.1 (zinc finger CCCH domain-containing protein 62-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 643.3 bits (1658), Expect = 1.7e-180
Identity = 355/506 (70.16%), Postives = 391/506 (77.27%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSG F   PRR ELEE ID+ GE DD+ DSDDSECDPSYS EE +NSK+SR SIRKKS
Sbjct: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           K     D ELIA+  +D  AP V  LNENDEKDI EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGG KKYP+YSF ++CKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKT+RQTWEDE ERQKVLMEKHARGSLARS REARV+EKEKRKTH +NR SRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPSQSNL+SAGTMLAE+MV LSVD+RK  +H HQ+  L GN G+P ++H   N T Q+K
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARK-AVHPHQEKTLFGNSGEPPRQH---NPTKQSK 360

Query: 361 SDLFINHRKQPF---------QENYLTQPRIKVD-PPASYNTQPRIYRADHAASVNKVLD 420
           SD+FI+H ++P+         Q NY +QP++K D PP SYN  P IYRADH AS      
Sbjct: 361 SDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPAS------ 420

Query: 421 GTNHTSWNHYRPPMGVYH-HPIVKNQPD---KQQRCRYYAEGRCYFGENCKFSHEMITE- 480
                     R  MG  + +P V    +   KQQRCRYYA GRC++GENCKFSHEM  + 
Sbjct: 421 ----------RLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDF 480

Query: 481 --RRDEERWRHTHH-------ARLCR 483
             R  E   RH HH       ARLCR
Sbjct: 481 AGREKERLGRHHHHHHQMHQNARLCR 486

[Close]

BLAST of MS009613 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-56
Identity = 149/369 (40.38%), Postives = 202/369 (54.74%), Query Frame = 0


Query: 8   EPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKSKPLNDVD 67
           E  P  + L  I D D  S D+  + D   D    ++    S+++R S+    K      
Sbjct: 50  EDDPEAASLAGICDPDAGSYDD-PTFDPAADGDLEVDAVLRSRMARMSLSSARKDRKGSR 109

Query: 68  MELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRKNGLRLTG 127
           M  + + +MD  A                V +++  G+LEKLKV +CK YLR + LRL+G
Sbjct: 110 MPKMGKEEMDLLA---------------MVDKLMHDGQLEKLKVYECKAYLRMHKLRLSG 169

Query: 128 TKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMYNVASRSS 187
            K+VL+ RI   +E+   G   KYP  SF+L+C+GD+C GDVV+FEQ +Y+    A R  
Sbjct: 170 NKEVLLTRIRGQIEVKTMGEV-KYPVSSFVLNCQGDSCKGDVVVFEQNIYKRKKGAPRGV 229

Query: 188 IGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKTL 247
            G  CG RT AGRI+KESYG  KQQHTFTIE+LWS+G KP PPLHPLLIKGRNLY+ KT+
Sbjct: 230 KGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHPLLIKGRNLYKDKTM 289

Query: 248 RQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFSENPSQSN 307
           RQ W DEEER + L EKHARG +AR  RE R+ +KE  +  + NR   +E  S+     N
Sbjct: 290 RQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRLNR--NKENKSKGQDNMN 349

Query: 308 LTSAGTMLAESMVSL-SVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTKSDLFIN 367
             S+  +  +  V+  +V  R   I    Q    G  G   Q+H S  +T   +   ++ 
Sbjct: 350 KKSSQAVFPQHTVTTNTVQKRAEKIIPSLQH---GESGNSSQQHLSSKQTPTEQLLHYLP 396

Query: 368 HRKQPFQEN 376
               P Q N
Sbjct: 410 QFPHPQQHN 396

[Close]

BLAST of MS009613 vs. ExPASy TrEMBL
Match: A0A6J1CWR5 (zinc finger CCCH domain-containing protein 62-like OS=Momordica charantia OX=3673 GN=LOC111014927 PE=4 SV=1)

HSP 1 Score: 954.9 bits (2467), Expect = 1.3e-274
Identity = 478/482 (99.17%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS
Sbjct: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KPLNDVDMELIAEADMD AAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK
Sbjct: 61  KPLNDVDMELIAEADMDDAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS
Sbjct: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK
Sbjct: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360

Query: 361 SDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWNHY 420
           SDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWN Y
Sbjct: 361 SDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSWNXY 420

Query: 421 RPPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEMITERRDEERWRHTHHARL 480
           R PMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEM+TERRDEERWRHTHHARL
Sbjct: 421 RLPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCKFSHEMMTERRDEERWRHTHHARL 480

Query: 481 CR 483
           CR
Sbjct: 481 CR 482

[Close]

BLAST of MS009613 vs. ExPASy TrEMBL
Match: A0A6J1GQF0 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662 GN=LOC111456567 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 2.3e-183
Identity = 358/506 (70.75%), Postives = 393/506 (77.67%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSG F   PRR ELEE+IDD GESDD+ DSDDSECDPSYS EE +NSK+SR SIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KP    D ELIA+A +D   P V  LNENDEKDI EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGG KKYP+YSF ++CKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKT+RQTWEDE ERQKVLMEKHARGSLARS REARV+EKEKRKTH +NR SRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPSQSNL+SAGTMLAE+MV LSVD+RK  +H HQ+ PL GN G+P ++H   N T QTK
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARK-AVHPHQERPLFGNSGEPPRQH---NPTKQTK 360

Query: 361 SDLFINHRKQPF---------QENYLTQPRIKVD-PPASYNTQPRIYRADHAASVNKVLD 420
           SD+FI+H ++P+         Q NY +QP++K D PP SYN  P IYRAD+ AS      
Sbjct: 361 SDVFIDHSRRPYQLQPMMNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADYPAS------ 420

Query: 421 GTNHTSWNHYRPPMGVYH-HPIVKNQPD---KQQRCRYYAEGRCYFGENCKFSHEMITE- 480
                     R  MG  + +P V        KQQRCRYYA GRC++GENCKFSHEM  + 
Sbjct: 421 ----------RLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQDF 480

Query: 481 --RRDEERWRHTHH-------ARLCR 483
             R  E   RH HH       ARLCR
Sbjct: 481 AGREKERLGRHHHHHHQMHQNARLCR 486

[Close]

BLAST of MS009613 vs. ExPASy TrEMBL
Match: A0A6J1JT10 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111488621 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 5.5e-177
Identity = 350/506 (69.17%), Postives = 387/506 (76.48%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAFSG F   PRR ELEE+ID+ GESDD+ +SDDSECDPSY  EE + +  S+ SIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDEHGESDDQCNSDDSECDPSYGFEEDNTN--SKVSIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KP    D ELIA+A +D  AP V  LNENDEKDI EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGG KKYP+YSF ++CKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKTLRQTWEDE ERQKVLMEKHARGSLARS REARV+EKEKRKTH +NR SRREGF+
Sbjct: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFN 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
           ENPS+SNL+SAGTMLAE+MV LSVD+RK  +H HQ+ PL G+ G+P Q     N T QTK
Sbjct: 301 ENPSKSNLSSAGTMLAETMVKLSVDARK-AVHPHQEKPLFGHSGEPRQ----HNPTKQTK 360

Query: 361 SDLFINHRKQPF---------QENYLTQPRIKVD-PPASYNTQPRIYRADHAASVNKVLD 420
           SD+FI+H ++P+         Q NY +QP++K D PP SYN  P IY ADH AS      
Sbjct: 361 SDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYSADHPAS------ 420

Query: 421 GTNHTSWNHYRPPMGVYH-HPIVKNQPD---KQQRCRYYAEGRCYFGENCKFSHEMITE- 480
                     R  MG  + +P V        KQQRCRYYA GRC++GENCKFSHEM  + 
Sbjct: 421 ----------RLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMAQDF 480

Query: 481 --RRDEERWRHTHH-------ARLCR 483
             R  E   RH HH       ARLCR
Sbjct: 481 AGREKERLGRHHHHHHQMHQNARLCR 483

[Close]

BLAST of MS009613 vs. ExPASy TrEMBL
Match: A0A5A7V0Q9 (Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001440 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 3.7e-173
Identity = 336/511 (65.75%), Postives = 388/511 (75.93%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAF    E  P R +LEE+IDD+GESDDEY SDDSECDPSYSI++++NSK SRTSIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KPL+ +DM L  ++D+D   PN+ ILNE DEKD  EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRI EHLEILNGGG KKYP+YSFI++CKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSS GPSCGTRTVAGRIVKESYG+SKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKT+RQTWEDE ERQKVL EKHARGSLARSNREARV+EKEKRKTHK+NR SR+EG+ 
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
            NPS+SNL+SAGTMLAESM  L+VDSR + +HQHQ+ P  GN GK          T QTK
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNV-VHQHQERPSFGNLGK---------ATDQTK 360

Query: 361 SDLFINHRKQP----------------------FQENYLTQPRIKVDPPASYNTQPRIYR 420
           S +FI+  + P                       Q NY +QP+ K +PPAS+N QP IYR
Sbjct: 361 SHMFIDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPPASFNIQPSIYR 420

Query: 421 ADHAA-SVNKVLDGTNHTSWNHYRPPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCK 480
            + AA SVNKVLD  NH   +       V H      +   Q +CRY+A G+CY+ E+CK
Sbjct: 421 TNPAASSVNKVLDNRNHIPMDRMNLYPKVNHS---AQEGYNQPQCRYFAVGKCYYRESCK 480

Query: 481 FSHEMITE--RRDEERWRHTHH----ARLCR 483
           FSH+M  +  +R++ER  H +H    AR CR
Sbjct: 481 FSHDMTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of MS009613 vs. ExPASy TrEMBL
Match: A0A1S3CH36 (zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103500669 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 3.7e-173
Identity = 336/511 (65.75%), Postives = 388/511 (75.93%), Query Frame = 0


Query: 1   MAFSGRFEPTPRRSELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKS 60
           MAF    E  P R +LEE+IDD+GESDDEY SDDSECDPSYSI++++NSK SRTSIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KPLNDVDMELIAEADMDGAAPNVTILNENDEKDIHEVLQIIKAGKLEKLKVEQCKVYLRK 120
           KPL+ +DM L  ++D+D   PN+ ILNE DEKD  EVL IIKAGKLEKLKVEQCK YLRK
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRI EHLEILNGGG KKYP+YSFI++CKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NVASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           N+ASRSS GPSCGTRTVAGRIVKESYG+SKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEEERQKVLMEKHARGSLARSNREARVLEKEKRKTHKDNRISRREGFS 300
           LYRMKT+RQTWEDE ERQKVL EKHARGSLARSNREARV+EKEKRKTHK+NR SR+EG+ 
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 ENPSQSNLTSAGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTMQTK 360
            NPS+SNL+SAGTMLAESM  L+VDSR + +HQHQ+ P  GN GK          T QTK
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNV-VHQHQERPSFGNLGK---------ATDQTK 360

Query: 361 SDLFINHRKQP----------------------FQENYLTQPRIKVDPPASYNTQPRIYR 420
           S +FI+  + P                       Q NY +QP+ K +PPAS+N QP IYR
Sbjct: 361 SHMFIDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPPASFNIQPSIYR 420

Query: 421 ADHAA-SVNKVLDGTNHTSWNHYRPPMGVYHHPIVKNQPDKQQRCRYYAEGRCYFGENCK 480
            + AA SVNKVLD  NH   +       V H      +   Q +CRY+A G+CY+ E+CK
Sbjct: 421 TNPAASSVNKVLDNRNHIPMDRMNLYPKVNHS---AQEGYNQPQCRYFAVGKCYYRESCK 480

Query: 481 FSHEMITE--RRDEERWRHTHH----ARLCR 483
           FSH+M  +  +R++ER  H +H    AR CR
Sbjct: 481 FSHDMTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of MS009613 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 202.2 bits (513), Expect = 9.4e-52
Identity = 153/448 (34.15%), Postives = 224/448 (50.00%), Query Frame = 0


Query: 15  ELEEIIDDDGESDDEYDSDDSECDPSYSIEEKSNSKISRTSIRKKSKPLNDVDMELIAEA 74
           E E++  D+   D+  + +D + + S    + S+                  D +   E+
Sbjct: 17  EEEDVFGDENNYDETEEEEDEDTNSSEDDSDWSH------------------DDDDATES 76

Query: 75  DMDGAAPNVTILNENDEKDIHE-VLQIIKAGK-LEKLKVEQCKVYLRKNGLRLTGTKDVL 134
           D++  A  + +  +ND+ D  + V +++ AG  L+ + V++CK YLRK+GLRL+GTK V 
Sbjct: 77  DVE--ADEIGVKGDNDDGDEDDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVC 136

Query: 135 IQRINEHLEILNGGGAKKYPDYSFILDCKGDACMGDVVMFEQKVYEMYNVASRSSIGPSC 194
           I RI EH  I +G G   YP  SF ++CKGD C GD+V+F QKV+  Y    +S  G   
Sbjct: 137 IDRILEHWRIKDGTGEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKS--GNIM 196

Query: 195 GTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKTLRQTWE 254
           G RTVAG++VKESYG +KQQHTFTIEVLW +G + LPPL+PLL+KGRNLYR+ TLRQ W 
Sbjct: 197 GRRTVAGQVVKESYGTAKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWP 256

Query: 255 DEEERQKVLMEKHARGSLARSNREARVLEKEKRKTH---KDNRISRREGFSENPSQ---- 314
           +EE+R KVL EKH RG+ AR     +V+ + K K+    KD R+ ++ G  + P Q    
Sbjct: 257 NEEDRVKVLNEKHNRGAAAR-----KVMRERKIKSGYVLKDGRL-QKPGHVKKPCQVKTR 316

Query: 315 -----SNLTS---AGTMLAESMVSLSVDSRKMGIHQHQQGPLCGNPGKPLQRHQSENRTM 374
                 NLT      T    S+V+    +   G   H       NP           R+ 
Sbjct: 317 KNEKDENLTQRLRQNTPANHSLVAFPNQNPSQGHKNHPTQLTDMNPANFYTSRPHAPRSH 376

Query: 375 QTKSDLFINHRKQPFQENYLTQPRIKVDPPASYNTQPRIYRADHAASVNKVLDGTNHTSW 434
              +     H  + +       PR  + P  SY    +  + +           T     
Sbjct: 377 APPTYAPRPHAPRSYAPINSHLPRPNIPPYHSYTYSEQQNQTNQRPPPASYTYSTQQNQT 435

Query: 435 NHYRPPMGVYHHPIVKNQPDKQQRCRYY 446
           N  RPP   Y +P  +NQ +++    +Y
Sbjct: 437 NQ-RPPPASYTYPTQQNQTNQRPPPAFY 435

The following BLAST results are available for this feature:

BLAST of MS009613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145492.1	2.6e-274	99.17	zinc finger CCCH domain-containing protein 62-like [Momordica charantia]	[more]
XP_038899462.1	1.6e-186	71.98	zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]	[more]
KAG6575426.1	2.2e-183	70.67	Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma s...	[more]
XP_022954256.1	4.8e-183	70.75	zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata]	[more]
XP_023548827.1	1.7e-180	70.16	zinc finger CCCH domain-containing protein 62-like isoform X2 [Cucurbita pepo su...	[more]

BLAST of MS009613 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	3.6e-56	40.38	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of MS009613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWR5	1.3e-274	99.17	zinc finger CCCH domain-containing protein 62-like OS=Momordica charantia OX=367...	[more]
A0A6J1GQF0	2.3e-183	70.75	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JT10	5.5e-177	69.17	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A5A7V0Q9	3.7e-173	65.75	Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CH36	3.7e-173	65.75	zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of MS009613 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	9.4e-52	34.15	SAP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 270..290
None	No IPR available	GENE3D	2.30.30.1190		coord: 392..473 e-value: 6.6E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..309
None	No IPR available	PANTHER	PTHR35323:SF4	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE	coord: 12..419
None	No IPR available	PANTHER	PTHR35323:SF4	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE	coord: 436..468
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 436..468
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 12..419
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 106..140 e-value: 1.3E-4 score: 31.3
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 106..140 e-value: 5.5E-10 score: 38.8
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 106..140 score: 9.966123
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 436..462 e-value: 5.3E-4 score: 29.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 436..463 score: 15.722612
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30	SAP domain	coord: 105..144 e-value: 6.4E-7 score: 30.9
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 96..141
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 442..460 e-value: 3.5E-7 score: 29.9
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 436..461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009613.1	MS009613.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding