MS009584 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAGCCCATGGGAGCATACGATAACTGCAAGCCATGCTCAGGGTCGTCTATAGATAATCAGCAGTGGAAATATAAAGAGTCTGTTCTAATACCGCCTCAAACTCAGTTTCTGATGCTCCTATCGCAGGACTGGGAGCATGCTTTTGACACTAACGCGGCGTGGAAAGGAATTAGGGTAAGGCTAAAGGCGTTGTCCAGTGGAGAAGGGACGCCT TTGAAGCCCATGGGAGCATACGATAACTGCAAGCCATGCTCAGGGTCGTCTATAGATAATCAGCAGTGGAAATATAAAGAGTCTGTTCTAATACCGCCTCAAACTCAGTTTCTGATGCTCCTATCGCAGGACTGGGAGCATGCTTTTGACACTAACGCGGCGTGGAAAGGAATTAGGGTAAGGCTAAAGGCGTTGTCCAGTGGAGAAGGGACGCCT TTGAAGCCCATGGGAGCATACGATAACTGCAAGCCATGCTCAGGGTCGTCTATAGATAATCAGCAGTGGAAATATAAAGAGTCTGTTCTAATACCGCCTCAAACTCAGTTTCTGATGCTCCTATCGCAGGACTGGGAGCATGCTTTTGACACTAACGCGGCGTGGAAAGGAATTAGGGTAAGGCTAAAGGCGTTGTCCAGTGGAGAAGGGACGCCT LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP Homology
BLAST of MS009584 vs. NCBI nr
Match: KAG6575453.1 (Protein Brevis radix-like 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. NCBI nr
Match: XP_022954276.1 (protein Brevis radix-like 3 [Cucurbita moschata] >XP_022954277.1 protein Brevis radix-like 3 [Cucurbita moschata]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. NCBI nr
Match: XP_022992309.1 (protein Brevis radix-like 2 [Cucurbita maxima] >XP_022992310.1 protein Brevis radix-like 2 [Cucurbita maxima]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. NCBI nr
Match: KAG7013997.1 (Protein Brevis radix-like 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. NCBI nr
Match: XP_023547515.1 (protein Brevis radix-like 3 [Cucurbita pepo subsp. pepo] >XP_023547516.1 protein Brevis radix-like 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. ExPASy Swiss-Prot
Match: Q8GYL9 (Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 9.6e-06 Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0
BLAST of MS009584 vs. ExPASy Swiss-Prot
Match: Q5HZ09 (Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04 Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0
BLAST of MS009584 vs. ExPASy TrEMBL
Match: A0A6J1JVC6 (protein Brevis radix-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111488661 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 8.1e-08 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. ExPASy TrEMBL
Match: A0A6J1GQL1 (protein Brevis radix-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456580 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 8.1e-08 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of MS009584 vs. ExPASy TrEMBL
Match: A0A6J1DMT8 (protein Brevis radix-like 2 OS=Momordica charantia OX=3673 GN=LOC111021847 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07 Identity = 34/72 (47.22%), Postives = 40/72 (55.56%), Query Frame = 0
BLAST of MS009584 vs. ExPASy TrEMBL
Match: A0A1S3CGN4 (protein Brevis radix-like 2 OS=Cucumis melo OX=3656 GN=LOC103500705 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07 Identity = 34/72 (47.22%), Postives = 40/72 (55.56%), Query Frame = 0
BLAST of MS009584 vs. ExPASy TrEMBL
Match: A0A5D3BWP1 (Protein Brevis radix-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001140 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07 Identity = 34/72 (47.22%), Postives = 40/72 (55.56%), Query Frame = 0
BLAST of MS009584 vs. TAIR 10
Match: AT3G14000.1 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein ) HSP 1 Score: 50.4 bits (119), Expect = 6.8e-07 Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0
BLAST of MS009584 vs. TAIR 10
Match: AT3G14000.2 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein ) HSP 1 Score: 50.4 bits (119), Expect = 6.8e-07 Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0
BLAST of MS009584 vs. TAIR 10
Match: AT1G54180.1 (BREVIS RADIX-like 3 ) HSP 1 Score: 47.0 bits (110), Expect = 7.5e-06 Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0
BLAST of MS009584 vs. TAIR 10
Match: AT1G54180.2 (BREVIS RADIX-like 3 ) HSP 1 Score: 47.0 bits (110), Expect = 7.5e-06 Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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