MS009105 (gene) Bitter gourd (TR) v1

Overview


Name	MS009105
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box protein
Location	scaffold687: 739398 .. 741371 (+)
RNA-Seq Expression	MS009105
Synteny	MS009105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAGGAACGAATTCGACTGGATGGAGTTCGAGGCAGAGATTGATCGCTTGCCGATTGACCTTCTGGCTCATATTTTTGCGATGATCAAGTCCTTCACTGATTTGGCCCAGTAATTGATGTCAATTTTTTCCGCTTTTTAGTTCGATTTCTTTGGTTGTTGTTTGTTCCTGTTCCTGATTGAGGAAGCGCAGGGCCAGCGGCGTGTGCAGGAAATGGAAGGAGGGAGTCAAACTGTCTCTAGGTAGCAGGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTCATTCGCCATGCCTACAGTCTTCGAGAGCTCGACATGTAATCTCTAGAATTTCTGTTTGCTTAAGAAATTTTCTTCAGGTTACTTTTCTTTTAGTAGCTTCTGATTACAGAGGGTTAAATTTGATACTGGTGTTGCGAGCGGTCTCATGAAGTGAGTTTTGCGAAATCACAAGGATTAACGATTGAATTGGATTTCAATTCTCATTTCCTGTCTATCATTATTCAGGCAATTCGGTTAGAGGTTTCTTTTAAGATTGATAGGATGTTGTTTGGGCATATTCTCTGGTGAAAGTTCTTTAAACTTGTACGATGAAGTTCTGTTATATTCTTAATGGTATTGGTTCGTGTTTTTGGTTGATCTTAACGACGCTTAATCTTATTCTTAAATTAAGGGCCATTACCATTATCAGAGTAACTCAATCGAGAACAAAATTGTGTTAAAAATAAATTTTAGTTTCTGAAATCGTGACCAATATTTGAGCACCATTTCCAAACTGCACGGCCATGAATGCCTTTGTTATTACTATGTTCACTCGAGCAAAATTCCTAGCTCTGGCTTGAATTGGCTAATTCATCATTCTCTTGTAATTTGTAATGTGTGTTTTTCAGCTCAAGAAGCCGCTGGGGTTGCCAAATAACTGACGCTGGATTGTGCAAAATTTCTCTTGCAAAGTGCATTCCCAACCTCACGTCCGTTTCGCTATGGGGTATGGCGGGGATCACTGACAAGGGCGTTGTGCAGCTGGTATGCTAATCTTTTCTCAGACTGAATATGCCTAAAGAAAAAAACTGTTGAAACCGGTCTTAATGTCTGAATTTAAAGTTTGAGTTTAGGTTGAAATTGGACGAGTGAGTTTCTGTAAATTTTACTTGGGCTAGGATTCTGGTGTGCGGCGTTAGTATTCATACCGTTAGTATTCATCCTGTTTGTATCTTCATTGTTGGTTTGCACCAATGTATACTAGGTTAAGACATCTTCTGGTCCTGAAGTTCATGTTCTTCAAGGAATTTAGGAGCTCTTTTTGAACATCGATTTTCTGTTTCAAAATTTTCCTCAAGGTCAAGGTTTGTACATGATTTTGGAAATACTGTTCCACTTGTTCTCAAAAGTAGTTCTTTCATAAATGTTGTTACTTCATTTTTGTTCTAAAAATCAGAAAACTGGAAAGCTGTTTTTGAAACACCTCCTTAGCTCTGCCTCTCATATTTCACTCCATTTTTTCAACATTTCATTTGGTTGTGCTGTATTCCCAGATTTCCCGAGCGAATTCCTTGCTAAACCTGAACATCGGCGGTACCTTTGTTACGGATATCTCCCTATTTGCAATAGCAGATAACTGTCCAAATTTAAAGGTGATTTTTCCAAGAACCTCCTTCACTTCCATTACCAAATCTGGTGAAAATTACGAATAGAATTATACACATACATCCTGCACAATCTTCAACCCGTGCATTTCTTTCTTTCTTCTGCAGACCATTGTCCTCTGGAGCTGTCGCCATGTAACAGAGAGCGGGCTTCTTGTTCTCGTAAGCAAATGTCACAAACTCCAGTCAATAAACGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCTATAAGTCCAGCACTCCAAATAAAATCAAGAGGCCTGCTTCTGAATTCTAGGTGGCCTGTTGTG

mRNA sequence

CAGAGGAACGAATTCGACTGGATGGAGTTCGAGGCAGAGATTGATCGCTTGCCGATTGACCTTCTGGCTCATATTTTTGCGATGATCAAGTCCTTCACTGATTTGGCCCAGGCCAGCGGCGTGTGCAGGAAATGGAAGGAGGGAGTCAAACTGTCTCTAGGTAGCAGGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTCATTCGCCATGCCTACAGTCTTCGAGAGCTCGACATCTCAAGAAGCCGCTGGGGTTGCCAAATAACTGACGCTGGATTGTGCAAAATTTCTCTTGCAAAGTGCATTCCCAACCTCACGTCCGTTTCGCTATGGGGTATGGCGGGGATCACTGACAAGGGCGTTGTGCAGCTGATTTCCCGAGCGAATTCCTTGCTAAACCTGAACATCGGCGGTACCTTTGTTACGGATATCTCCCTATTTGCAATAGCAGATAACTGTCCAAATTTAAAGACCATTGTCCTCTGGAGCTGTCGCCATGTAACAGAGAGCGGGCTTCTTGTTCTCGTAAGCAAATGTCACAAACTCCAGTCAATAAACGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCTATAAGTCCAGCACTCCAAATAAAATCAAGAGGCCTGCTTCTGAATTCTAGGTGGCCTGTTGTG

Coding sequence (CDS)

CAGAGGAACGAATTCGACTGGATGGAGTTCGAGGCAGAGATTGATCGCTTGCCGATTGACCTTCTGGCTCATATTTTTGCGATGATCAAGTCCTTCACTGATTTGGCCCAGGCCAGCGGCGTGTGCAGGAAATGGAAGGAGGGAGTCAAACTGTCTCTAGGTAGCAGGGAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATGACTCCACTGCTCGCCTCATTCGCCATGCCTACAGTCTTCGAGAGCTCGACATCTCAAGAAGCCGCTGGGGTTGCCAAATAACTGACGCTGGATTGTGCAAAATTTCTCTTGCAAAGTGCATTCCCAACCTCACGTCCGTTTCGCTATGGGGTATGGCGGGGATCACTGACAAGGGCGTTGTGCAGCTGATTTCCCGAGCGAATTCCTTGCTAAACCTGAACATCGGCGGTACCTTTGTTACGGATATCTCCCTATTTGCAATAGCAGATAACTGTCCAAATTTAAAGACCATTGTCCTCTGGAGCTGTCGCCATGTAACAGAGAGCGGGCTTCTTGTTCTCGTAAGCAAATGTCACAAACTCCAGTCAATAAACGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCTATAAGTCCAGCACTCCAAATAAAATCAAGAGGCCTGCTTCTGAATTCTAGGTGGCCTGTTGTG

Protein sequence

QRNEFDWMEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMDDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCHKLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV

Homology

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BLAST of MS009105 vs. NCBI nr
Match: XP_022149436.1 (F-box protein At5g67140 [Momordica charantia])

HSP 1 Score: 448.0 bits (1151), Expect = 5.0e-122
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD
Sbjct: 1   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 60

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG
Sbjct: 61  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 120

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKC 
Sbjct: 121 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCR 180

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV
Sbjct: 181 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 223

[Close]

BLAST of MS009105 vs. NCBI nr
Match: XP_022927967.1 (F-box protein At5g67140-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 7.5e-110
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+FE EIDRLPIDLLAHIFAMI SFTDLAQA GVCRKWKEGVKLSLG +ESLSFAGWKMD
Sbjct: 20  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 79

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLR+LDISRSRWG QITD GL +ISLA CIPNLTS+SLWGMAGITDKG
Sbjct: 80  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 139

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLN+GGTFVTD+SL AIADNCPNLK+IVLWSCRHVTESGLL+LVSKC 
Sbjct: 140 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 199

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPVV
Sbjct: 200 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 242

[Close]

BLAST of MS009105 vs. NCBI nr
Match: XP_022927966.1 (F-box protein At5g67140-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 7.5e-110
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+FE EIDRLPIDLLAHIFAMI SFTDLAQA GVCRKWKEGVKLSLG +ESLSFAGWKMD
Sbjct: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLR+LDISRSRWG QITD GL +ISLA CIPNLTS+SLWGMAGITDKG
Sbjct: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLN+GGTFVTD+SL AIADNCPNLK+IVLWSCRHVTESGLL+LVSKC 
Sbjct: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPVV
Sbjct: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 255

[Close]

BLAST of MS009105 vs. NCBI nr
Match: XP_023512668.1 (F-box protein At5g67140-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512669.1 F-box protein At5g67140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110
Identity = 197/223 (88.34%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+F+ EIDRLPIDLLAHIFAMI SFTDLAQA  VCRKWKEGVKLSLG +ESLSFAGWKMD
Sbjct: 33  MDFDPEIDRLPIDLLAHIFAMITSFTDLAQACAVCRKWKEGVKLSLGRKESLSFAGWKMD 92

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLR+LDISRSRWGCQITD GL +ISLA CIPNLTS+SLWGMAGITDKG
Sbjct: 93  DDSTARLIRHAYSLRDLDISRSRWGCQITDHGLHQISLASCIPNLTSISLWGMAGITDKG 152

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLN+GGTFVTD+S+ AIADNCPNLK+IVLWSCRHVTESGLL+LVSKC 
Sbjct: 153 VVQLISRANSLQNLNVGGTFVTDVSILAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPVV
Sbjct: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 255

[Close]

BLAST of MS009105 vs. NCBI nr
Match: XP_023512670.1 (F-box protein At5g67140-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110
Identity = 197/223 (88.34%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+F+ EIDRLPIDLLAHIFAMI SFTDLAQA  VCRKWKEGVKLSLG +ESLSFAGWKMD
Sbjct: 20  MDFDPEIDRLPIDLLAHIFAMITSFTDLAQACAVCRKWKEGVKLSLGRKESLSFAGWKMD 79

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLR+LDISRSRWGCQITD GL +ISLA CIPNLTS+SLWGMAGITDKG
Sbjct: 80  DDSTARLIRHAYSLRDLDISRSRWGCQITDHGLHQISLASCIPNLTSISLWGMAGITDKG 139

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLN+GGTFVTD+S+ AIADNCPNLK+IVLWSCRHVTESGLL+LVSKC 
Sbjct: 140 VVQLISRANSLQNLNVGGTFVTDVSILAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 199

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPVV
Sbjct: 200 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 242

[Close]

BLAST of MS009105 vs. ExPASy Swiss-Prot
Match: Q9FH99 (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-85
Identity = 153/221 (69.23%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+ EA IDRLP+DLLA+IF++  SFT LAQASGVC+KW++ V  S+  RE+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDST+RL+  A++L+ELDISRSRWGC ITD GL +I+ A+C+ NL SVSLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISR +SL +LNIGGTF+TD SLFAIA+ C  LKTI +W CRHVTE GLLVLV+KC 
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWP 229
           KL+SIN+WG RVPVDCFI L+ ISPALQIK   LLLN++ P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]

BLAST of MS009105 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13
Identity = 55/208 (26.44%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 17  LPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKM---------- 76
           +P++LL  I +++    ++  ASGVC  W++ +   L +R  LS+    M          
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGL-TRLRLSWCNNNMNSLVLSLVPK 90

Query: 77  ----------------DDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIP 136
                           +D++   +  H + L+ELD+S+S    +ITD  L   +LA   P
Sbjct: 91  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRSL--YALAHGCP 150

Query: 137 NLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGGTF--VTDISLFAIADNCPNLKTIVL 196
           +LT ++L G    +D  +  L      L  LN+ G    VTD +L AI +NC  ++++ L
Sbjct: 151 DLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNL 210

[Close]

BLAST of MS009105 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-12
Identity = 61/233 (26.18%), Postives = 112/233 (48.07%), Query Frame = 0


Query: 17  LPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKM---------- 76
           +P++LL  I  ++   T +  AS +C  W++ V L L +R SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVII-ASCICSGWRDAVSLGL-TRLSLSWCKKNMNSLVLSLAPK 90

Query: 77  ----------------DDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIP 136
                           +D++   +  H + L++LD+S+S    +ITD  L   SLA+   
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSL--YSLARGCT 150

Query: 137 NLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGGTF--VTDISLFAIADNCPNLKTIVL 196
           NLT ++L G    +D  +  L      L  LN+ G    V+D +L AI +NC  L+++ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

Query: 197 WSCRHVTESGLLVLVSKCHKLQSINVWGMRVPVDCFIGLVAISPALQIKSRGL 222
             C ++++ G++ L   C  L+++++    +  D  +  +A +  + ++S GL
Sbjct: 211 GWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALA-NRCIHLRSLGL 255

[Close]

BLAST of MS009105 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.3e-11
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 94  QITDAGLCKISLAKCIPNLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGG-TFVTDIS 153
           +++D GL   S+ +  P+L S+SLW ++ ITD G++++      L  L +   + +TD  
Sbjct: 163 KVSDLGL--RSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 154 LFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCHKLQSINV 195
           L AIA +CPNL  + L +C  + + GLL +   C KL+S+++
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

[Close]

BLAST of MS009105 vs. ExPASy Swiss-Prot
Match: Q9QZN1 (F-box/LRR-repeat protein 17 OS=Mus musculus OX=10090 GN=Fbxl17 PE=1 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 46/188 (24.47%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 13  EIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKE-------GVKLSLGSRESLSFAGWK 72
           +I++LP  +L  IF+ +        AS VC+ W++         +L L SR+ ++     
Sbjct: 320 DINQLPPSILLKIFSNLSLNERCLSASLVCKYWRDLCLDFQFWKQLDLSSRQQVT----- 379

Query: 73  MDDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITD 132
             D+   ++   + ++ E++IS  R    ++D+G+C ++  KC P L   + +    ++D
Sbjct: 380 --DELLEKIASRSQNIIEINISDCR---SLSDSGVCVLAF-KC-PGLLRYTAYRCKQLSD 439

Query: 133 KGVVQLISRANSLLNLNIGG-TFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVS 192
             ++ + S    L  +++G    +TD  L  +   C  LK I    C  +++ G++V+  
Sbjct: 440 TSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSRCRELKDIHFGQCYKISDEGMIVIAK 495

[Close]

BLAST of MS009105 vs. ExPASy TrEMBL
Match: A0A6J1D8D0 (F-box protein At5g67140 OS=Momordica charantia OX=3673 GN=LOC111017864 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.4e-122
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD
Sbjct: 1   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 60

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG
Sbjct: 61  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 120

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKC 
Sbjct: 121 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCR 180

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV
Sbjct: 181 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 223

[Close]

BLAST of MS009105 vs. ExPASy TrEMBL
Match: A0A6J1EIZ0 (F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.6e-110
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+FE EIDRLPIDLLAHIFAMI SFTDLAQA GVCRKWKEGVKLSLG +ESLSFAGWKMD
Sbjct: 33  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 92

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLR+LDISRSRWG QITD GL +ISLA CIPNLTS+SLWGMAGITDKG
Sbjct: 93  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 152

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLN+GGTFVTD+SL AIADNCPNLK+IVLWSCRHVTESGLL+LVSKC 
Sbjct: 153 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 212

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPVV
Sbjct: 213 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 255

[Close]

BLAST of MS009105 vs. ExPASy TrEMBL
Match: A0A6J1EIM3 (F-box protein At5g67140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434817 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.6e-110
Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+FE EIDRLPIDLLAHIFAMI SFTDLAQA GVCRKWKEGVKLSLG +ESLSFAGWKMD
Sbjct: 20  MDFEPEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRKESLSFAGWKMD 79

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDSTARLIRHAYSLR+LDISRSRWG QITD GL +ISLA CIPNLTS+SLWGMAGITDKG
Sbjct: 80  DDSTARLIRHAYSLRDLDISRSRWGSQITDHGLHQISLANCIPNLTSISLWGMAGITDKG 139

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLN+GGTFVTD+SL AIADNCPNLK+IVLWSCRHVTESGLL+LVSKC 
Sbjct: 140 VVQLISRANSLQNLNVGGTFVTDVSLLAIADNCPNLKSIVLWSCRHVTESGLLILVSKCR 199

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPVV
Sbjct: 200 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVV 242

[Close]

BLAST of MS009105 vs. ExPASy TrEMBL
Match: A0A6J1KZ61 (F-box protein At5g67140 OS=Cucurbita maxima OX=3661 GN=LOC111499581 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 200/223 (89.69%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           ME EAEIDRLPIDLLAHIFAMI SFTDLAQA GVCRKWKEGVKLSLG RESLSFAGWKMD
Sbjct: 11  MELEAEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSLGRRESLSFAGWKMD 70

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           D STARLI HAYSLR+LDISRSRWGCQITD GL +ISLAKCIPNL S+SLWGMAGITDKG
Sbjct: 71  DYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLKSISLWGMAGITDKG 130

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLNIGGTFVTD+SLFAIADNCPNLKTI LWSCRHVTE+GLL+LVSKC 
Sbjct: 131 VVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRHVTETGLLILVSKCC 190

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPV+
Sbjct: 191 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

[Close]

BLAST of MS009105 vs. ExPASy TrEMBL
Match: A0A6J1G699 (F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109
Identity = 199/223 (89.24%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           ME E EIDRLPIDLLAHIFAMI SFTDLAQA GVCRKWKEGVKLSLG RESLSFAGWKMD
Sbjct: 11  MELEPEIDRLPIDLLAHIFAMIPSFTDLAQACGVCRKWKEGVKLSLGRRESLSFAGWKMD 70

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           D STARLI HAYSLR+LDISRSRWGCQITD GL +ISLAKCIPNL S+SLWGMAGITDKG
Sbjct: 71  DYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKCIPNLKSISLWGMAGITDKG 130

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISRANSL NLNIGGTFVTD+SLFAIADNCPNLKTI LWSCRHVTE+GLL+LVSKC 
Sbjct: 131 VVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGLWSCRHVTETGLLILVSKCR 190

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWPVV 231
           KL+SINVWGMRVPVDCFIGLVAISP+LQIKSR LLLNS WPV+
Sbjct: 191 KLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLLNSMWPVL 233

[Close]

BLAST of MS009105 vs. TAIR 10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 316.6 bits (810), Expect = 1.6e-86
Identity = 153/221 (69.23%), Postives = 183/221 (82.81%), Query Frame = 0


Query: 8   MEFEAEIDRLPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKMD 67
           M+ EA IDRLP+DLLA+IF++  SFT LAQASGVC+KW++ V  S+  RE+LSFAGWKMD
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQASGVCKKWRKAVNQSMARRETLSFAGWKMD 60

Query: 68  DDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIPNLTSVSLWGMAGITDKG 127
           DDST+RL+  A++L+ELDISRSRWGC ITD GL +I+ A+C+ NL SVSLWGM  ITD G
Sbjct: 61  DDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSG 120

Query: 128 VVQLISRANSLLNLNIGGTFVTDISLFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCH 187
           VVQLISR +SL +LNIGGTF+TD SLFAIA+ C  LKTI +W CRHVTE GLLVLV+KC 
Sbjct: 121 VVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCR 180

Query: 188 KLQSINVWGMRVPVDCFIGLVAISPALQIKSRGLLLNSRWP 229
           KL+SIN+WG RVPVDCFI L+ ISPALQIK   LLLN++ P
Sbjct: 181 KLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNAQNP 221

[Close]

BLAST of MS009105 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-14
Identity = 55/208 (26.44%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 17  LPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKM---------- 76
           +P++LL  I +++    ++  ASGVC  W++ +   L +R  LS+    M          
Sbjct: 31  IPVELLMRILSLVDD-RNVIVASGVCTGWRDAISFGL-TRLRLSWCNNNMNSLVLSLVPK 90

Query: 77  ----------------DDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIP 136
                           +D++   +  H + L+ELD+S+S    +ITD  L   +LA   P
Sbjct: 91  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKS---LKITDRSL--YALAHGCP 150

Query: 137 NLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGGTF--VTDISLFAIADNCPNLKTIVL 196
           +LT ++L G    +D  +  L      L  LN+ G    VTD +L AI +NC  ++++ L
Sbjct: 151 DLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNL 210

[Close]

BLAST of MS009105 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 61/233 (26.18%), Postives = 112/233 (48.07%), Query Frame = 0


Query: 17  LPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKM---------- 76
           +P++LL  I  ++   T +  AS +C  W++ V L L +R SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVII-ASCICSGWRDAVSLGL-TRLSLSWCKKNMNSLVLSLAPK 90

Query: 77  ----------------DDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIP 136
                           +D++   +  H + L++LD+S+S    +ITD  L   SLA+   
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSL--YSLARGCT 150

Query: 137 NLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGGTF--VTDISLFAIADNCPNLKTIVL 196
           NLT ++L G    +D  +  L      L  LN+ G    V+D +L AI +NC  L+++ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

Query: 197 WSCRHVTESGLLVLVSKCHKLQSINVWGMRVPVDCFIGLVAISPALQIKSRGL 222
             C ++++ G++ L   C  L+++++    +  D  +  +A +  + ++S GL
Sbjct: 211 GWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALA-NRCIHLRSLGL 255

[Close]

BLAST of MS009105 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 61/233 (26.18%), Postives = 112/233 (48.07%), Query Frame = 0


Query: 17  LPIDLLAHIFAMIKSFTDLAQASGVCRKWKEGVKLSLGSRESLSFAGWKM---------- 76
           +P++LL  I  ++   T +  AS +C  W++ V L L +R SLS+    M          
Sbjct: 31  IPVELLMKILNLVDDRTVII-ASCICSGWRDAVSLGL-TRLSLSWCKKNMNSLVLSLAPK 90

Query: 77  ----------------DDDSTARLIRHAYSLRELDISRSRWGCQITDAGLCKISLAKCIP 136
                           +D++   +  H + L++LD+S+S    +ITD  L   SLA+   
Sbjct: 91  FVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKS---SKITDHSL--YSLARGCT 150

Query: 137 NLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGGTF--VTDISLFAIADNCPNLKTIVL 196
           NLT ++L G    +D  +  L      L  LN+ G    V+D +L AI +NC  L+++ L
Sbjct: 151 NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNL 210

Query: 197 WSCRHVTESGLLVLVSKCHKLQSINVWGMRVPVDCFIGLVAISPALQIKSRGL 222
             C ++++ G++ L   C  L+++++    +  D  +  +A +  + ++S GL
Sbjct: 211 GWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALA-NRCIHLRSLGL 255

[Close]

BLAST of MS009105 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 68.9 bits (167), Expect = 5.9e-12
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 94  QITDAGLCKISLAKCIPNLTSVSLWGMAGITDKGVVQLISRANSLLNLNIGG-TFVTDIS 153
           +++D GL   S+ +  P+L S+SLW ++ ITD G++++      L  L +   + +TD  
Sbjct: 163 KVSDLGL--RSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKG 222

Query: 154 LFAIADNCPNLKTIVLWSCRHVTESGLLVLVSKCHKLQSINV 195
           L AIA +CPNL  + L +C  + + GLL +   C KL+S+++
Sbjct: 223 LVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSI 262

The following BLAST results are available for this feature:

BLAST of MS009105 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149436.1	5.0e-122	99.55	F-box protein At5g67140 [Momordica charantia]	[more]
XP_022927967.1	7.5e-110	89.24	F-box protein At5g67140-like isoform X2 [Cucurbita moschata]	[more]
XP_022927966.1	7.5e-110	89.24	F-box protein At5g67140-like isoform X1 [Cucurbita moschata]	[more]
XP_023512668.1	9.8e-110	88.34	F-box protein At5g67140-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235126...	[more]
XP_023512670.1	9.8e-110	88.34	F-box protein At5g67140-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS009105 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH99	2.3e-85	69.23	F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1	[more]
Q9LPL4	6.8e-13	26.44	F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1	[more]
O49286	4.4e-12	26.18	F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1	[more]
Q9SKK0	8.3e-11	34.31	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
Q9QZN1	2.7e-09	24.47	F-box/LRR-repeat protein 17 OS=Mus musculus OX=10090 GN=Fbxl17 PE=1 SV=3	[more]

BLAST of MS009105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8D0	2.4e-122	99.55	F-box protein At5g67140 OS=Momordica charantia OX=3673 GN=LOC111017864 PE=4 SV=1	[more]
A0A6J1EIZ0	3.6e-110	89.24	F-box protein At5g67140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1EIM3	3.6e-110	89.24	F-box protein At5g67140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KZ61	1.4e-109	89.69	F-box protein At5g67140 OS=Cucurbita maxima OX=3661 GN=LOC111499581 PE=4 SV=1	[more]
A0A6J1G699	2.4e-109	89.24	F-box protein At5g67140 OS=Cucurbita moschata OX=3662 GN=LOC111451179 PE=4 SV=1	[more]

BLAST of MS009105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67140.1	1.6e-86	69.23	F-box/RNI-like superfamily protein	[more]
AT1G21410.1	4.8e-14	26.44	F-box/RNI-like superfamily protein	[more]
AT1G77000.1	3.1e-13	26.18	RNI-like superfamily protein	[more]
AT1G77000.2	3.1e-13	26.18	RNI-like superfamily protein	[more]
AT2G25490.1	5.9e-12	34.31	EIN3-binding F box protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 109..134 e-value: 3.2 score: 16.7 coord: 160..185 e-value: 0.0083 score: 25.3 coord: 78..106 e-value: 450.0 score: 1.7 coord: 135..159 e-value: 75.0 score: 7.7
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 9..215 e-value: 1.1E-29 score: 105.4
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 14..47 e-value: 1.4E-6 score: 28.1
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 10..225
None	No IPR available	PANTHER	PTHR16134:SF117	SUBFAMILY NOT NAMED	coord: 10..225
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 66..200
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 14..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009105.1	MS009105.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding