MS009014 (gene) Bitter gourd (TR) v1

Overview
NameMS009014
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein XRI1
Locationscaffold385: 50375 .. 51786 (+)
RNA-Seq ExpressionMS009014
SyntenyMS009014
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGCCGCCACTGCCGCCGTCGCCGTCGCCGTCGACCCATGTTTCTCGCCGGAGCTTTCCACCGGTTATTTGGAAGACGCCTTGGTTGAGTTCACTTCAAAACGACGACGCTTGCTCCTCAACGATCACATTCACAATAATAATCTTGTTGATCAATTTCAATTTCCTCAGAGCTACTGGAGTTCGTATTGCACGTGGGGGGCGGACGCCGATAATGCCTCCGACACTTTCGATTGGACCAACCAAATTTACGATTTCAATAATTATGATGCAGTTTCAGCAGGTGGGGTTCTTTTTTTTCCCTTAAATTTTAATTTATGACGTACGATTCATAAGTTCATAATTAATTAATGACTATTTTGTGGAATTATGGTCATTATTATTGTGGGAGAAGCTTGTAATTTGAGTTAACTTTTTTGGCAAAAAGAAAACAAACGTACGGTTGGATGGGTTGGAAAAGTTTTGTTGGGATTTAATTGAATGAAGAAACTGAAATTGGTTTTGGTTTTGGTTGGGTTTAATTACTAATTGTTATTTATTATGTGCAGATGAGCTGATAAGCACTTCGCCGAAAAGCAGAATCAGTGAGGAAACCAATTATACGGATGTGTCAGCGATGAAAACGCCGGAAGTAGAAGCGTTTTCGACTCCTAATTATAATAATTACTGCTATGAACATCCAAATTCTTCTTCGTCTTCCTCTAAACACCAATTCCACGCTGAGTTTTTGGCTGATAAACAAACAATTTTATCCCTCTCCCGCAAGCTGCCTTTATCTTCAGGTGATCCACTTTTTTCTTTCTCTCTCTCTCAATTTTATATTTCGTTTTGATCGAAAAAAAGATATGGGTATTGAGCACTAGAATTGTAAACAAAAAGACGATCTTGGTGGGGTATTATATATTATATATAGAATATATATTGGCGTAATAGAATTATTTCTTAATAACTTTCACGGTTTTTTTTCCTTCTTCAAATTTAGTTAATTAGAAAAGCTAAAAAAGATTAAATTTAAAATATTTTCATAATTTCTCTTAAGTTTTTTGTCTGCTGCATGTTGGAGCTTATATATTGGTATAATTTTGAAATATTAATTTGGGCTTTTTTTTTTTTGAATTAATTAATCAGGTCGTGGAAGTGAAACAAAAAACTTGAAGAAGAGGAAGGTGGTGTATCCATTTGCGTTGGTAAAGCCAGGAGGCGTAGAAGGGGACATAACCTTAAACGACATAAACCAAAAAATCTTAATGCCTCCGACCCGGCCGGTCCGTCACCCGGTCGGAGATTTCGCATGTCGGCCGTGCGTGTCGGCGGACGGACCGGGTCTCTCCGGCAAAGCCGTGGTGGCGCTCACAAGAATCCACACTCAGGGAAGGAGAGGCAGCATCACCATTATTAGAACCAAAGGT

mRNA sequence

ATGGACGCCGCCACTGCCGCCGTCGCCGTCGCCGTCGACCCATGTTTCTCGCCGGAGCTTTCCACCGGTTATTTGGAAGACGCCTTGGTTGAGTTCACTTCAAAACGACGACGCTTGCTCCTCAACGATCACATTCACAATAATAATCTTGTTGATCAATTTCAATTTCCTCAGAGCTACTGGAGTTCGTATTGCACGTGGGGGGCGGACGCCGATAATGCCTCCGACACTTTCGATTGGACCAACCAAATTTACGATTTCAATAATTATGATGCAGTTTCAGCAGATGAGCTGATAAGCACTTCGCCGAAAAGCAGAATCAGTGAGGAAACCAATTATACGGATGTGTCAGCGATGAAAACGCCGGAAGTAGAAGCGTTTTCGACTCCTAATTATAATAATTACTGCTATGAACATCCAAATTCTTCTTCGTCTTCCTCTAAACACCAATTCCACGCTGAGTTTTTGGCTGATAAACAAACAATTTTATCCCTCTCCCGCAAGCTGCCTTTATCTTCAGGTCGTGGAAGTGAAACAAAAAACTTGAAGAAGAGGAAGGTGGTGTATCCATTTGCGTTGGTAAAGCCAGGAGGCGTAGAAGGGGACATAACCTTAAACGACATAAACCAAAAAATCTTAATGCCTCCGACCCGGCCGGTCCGTCACCCGGTCGGAGATTTCGCATGTCGGCCGTGCGTGTCGGCGGACGGACCGGGTCTCTCCGGCAAAGCCGTGGTGGCGCTCACAAGAATCCACACTCAGGGAAGGAGAGGCAGCATCACCATTATTAGAACCAAAGGT

Coding sequence (CDS)

ATGGACGCCGCCACTGCCGCCGTCGCCGTCGCCGTCGACCCATGTTTCTCGCCGGAGCTTTCCACCGGTTATTTGGAAGACGCCTTGGTTGAGTTCACTTCAAAACGACGACGCTTGCTCCTCAACGATCACATTCACAATAATAATCTTGTTGATCAATTTCAATTTCCTCAGAGCTACTGGAGTTCGTATTGCACGTGGGGGGCGGACGCCGATAATGCCTCCGACACTTTCGATTGGACCAACCAAATTTACGATTTCAATAATTATGATGCAGTTTCAGCAGATGAGCTGATAAGCACTTCGCCGAAAAGCAGAATCAGTGAGGAAACCAATTATACGGATGTGTCAGCGATGAAAACGCCGGAAGTAGAAGCGTTTTCGACTCCTAATTATAATAATTACTGCTATGAACATCCAAATTCTTCTTCGTCTTCCTCTAAACACCAATTCCACGCTGAGTTTTTGGCTGATAAACAAACAATTTTATCCCTCTCCCGCAAGCTGCCTTTATCTTCAGGTCGTGGAAGTGAAACAAAAAACTTGAAGAAGAGGAAGGTGGTGTATCCATTTGCGTTGGTAAAGCCAGGAGGCGTAGAAGGGGACATAACCTTAAACGACATAAACCAAAAAATCTTAATGCCTCCGACCCGGCCGGTCCGTCACCCGGTCGGAGATTTCGCATGTCGGCCGTGCGTGTCGGCGGACGGACCGGGTCTCTCCGGCAAAGCCGTGGTGGCGCTCACAAGAATCCACACTCAGGGAAGGAGAGGCAGCATCACCATTATTAGAACCAAAGGT

Protein sequence

MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMKTPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG
Homology
BLAST of MS009014 vs. NCBI nr
Match: XP_022146436.1 (uncharacterized protein LOC111015652 [Momordica charantia])

HSP 1 Score: 535.0 bits (1377), Expect = 3.6e-148
Identity = 266/267 (99.63%), Postives = 266/267 (99.63%), Query Frame = 0

Query: 1   MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSY 60
           MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSY
Sbjct: 17  MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSY 76

Query: 61  WSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMK 120
           WSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMK
Sbjct: 77  WSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMK 136

Query: 121 TPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETK 180
           TPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSG GSETK
Sbjct: 137 TPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGGGSETK 196

Query: 181 NLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGL 240
           NLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGL
Sbjct: 197 NLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGL 256

Query: 241 SGKAVVALTRIHTQGRRGSITIIRTKG 268
           SGKAVVALTRIHTQGRRGSITIIRTKG
Sbjct: 257 SGKAVVALTRIHTQGRRGSITIIRTKG 283

BLAST of MS009014 vs. NCBI nr
Match: XP_004151416.1 (uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hypothetical protein Csa_017825 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-76
Identity = 172/273 (63.00%), Postives = 198/273 (72.53%), Query Frame = 0

Query: 3   AATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWS 62
           A     A  +DPCFSP +STGYLEDALVE+TSKRRRL  +D  H       FQFPQ   +
Sbjct: 23  AIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHH----FFHFQFPQ---T 82

Query: 63  SYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRIS-EETNYTDVSAMKT 122
           SY  W    D      D  N  Y + NY A+S DE IS+SPKSR+S EET+  D+  MKT
Sbjct: 83  SYDYWNNQID------DINNDYYYYYNYHAISTDEGISSSPKSRLSNEETSMEDM--MKT 142

Query: 123 PEVEAFSTPNY------NNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGR 182
            +VE +STPNY       ++ + HPNSSSSSS      +F AD+++I S+S  LP+S+G 
Sbjct: 143 QDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSH--KFEADQKSIFSMSTNLPISTGD 202

Query: 183 GS-ETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVS 242
           G  E K  KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVS
Sbjct: 203 GEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVS 262

Query: 243 ADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
           ADGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 263 ADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

BLAST of MS009014 vs. NCBI nr
Match: KAA0067591.1 (protein XRI1 [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 3.7e-76
Identity = 169/272 (62.13%), Postives = 196/272 (72.06%), Query Frame = 0

Query: 9   AVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWG 68
           A  +DPCFSP +STGYLEDAL+E+TSKRRRL      H+ +   QF+FPQ   SSY  W 
Sbjct: 6   AAVIDPCFSPAISTGYLEDALLEYTSKRRRL-----DHDQHHFFQFEFPQ---SSYHYWN 65

Query: 69  ADADNASDTFDWTNQIYDFNNYDAVSA-----------DELISTSPKSRISEETNYTDVS 128
              D      D  N  Y + NYDA+S            DE IS+SPKSR+S E    + +
Sbjct: 66  HQID------DMNNDNYYYYNYDAISTGGFSLHYSIVIDEGISSSPKSRLSNEETSME-A 125

Query: 129 AMKTPEVEAFSTPN-YNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRG 188
            MKT +VE +STPN Y  + + HPNSSSSSS      +F AD+++I S+S  LP+S+G G
Sbjct: 126 IMKTQDVETYSTPNYYYEHHHHHPNSSSSSSSKSH--KFEADQKSIFSMSTNLPISTGDG 185

Query: 189 S-ETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSA 248
             ETK  KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSA
Sbjct: 186 EIETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSA 245

Query: 249 DGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
           DGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 246 DGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 260

BLAST of MS009014 vs. NCBI nr
Match: XP_022989840.1 (uncharacterized protein LOC111486907 [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 4.1e-75
Identity = 160/256 (62.50%), Postives = 185/256 (72.27%), Query Frame = 0

Query: 14  PCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWGADADN 73
           P   P +STGYLEDAL+EFTSKR R    DH H    + Q +FP SYWSS CTW  DA N
Sbjct: 20  PSSPPPISTGYLEDALLEFTSKRPRF---DHHH----LLQLEFPHSYWSSCCTWEGDAFN 79

Query: 74  ASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSA--MKTPEVEAFSTPN 133
           +++  D  N  YD+  YD VS DE+ + SPKSRIS+ETN TD+S   MKTPE+EAFSTPN
Sbjct: 80  STNHIDHINDNYDYYYYDTVSPDEMFAASPKSRISDETN-TDLSMGDMKTPEIEAFSTPN 139

Query: 134 YNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETKNLKKRKVVYPF 193
           +  Y            +HQ  AEFL  KQ         P+S+  GS TK  KKRKVVYPF
Sbjct: 140 HFYY------------EHQADAEFLPCKQ---------PISTDGGSVTKRAKKRKVVYPF 199

Query: 194 ALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRI 253
            LVKPGG++GDITLNDIN+ +LMPPTRPVRHPVGDFACRPCVSA+GPGLSGKAVVALT+I
Sbjct: 200 ELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSGKAVVALTKI 246

Query: 254 HTQGRRGSITIIRTKG 268
           HT+GRRGSITIIRT+G
Sbjct: 260 HTRGRRGSITIIRTRG 246

BLAST of MS009014 vs. NCBI nr
Match: XP_038874964.1 (uncharacterized protein LOC120067481 [Benincasa hispida])

HSP 1 Score: 287.7 bits (735), Expect = 1.0e-73
Identity = 167/272 (61.40%), Postives = 197/272 (72.43%), Query Frame = 0

Query: 3   AATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWS 62
           A     A  ++P FSP +STGYLEDALVE+TSKRRRL   DH      + QF+FPQS WS
Sbjct: 22  AVMDGAAAVIEPSFSPAISTGYLEDALVEYTSKRRRL---DH-----HLFQFEFPQSCWS 81

Query: 63  SYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMKTP 122
           +    G D +N  D  +  N  Y ++NYDAVS +E IS+S KSR+SEET+   +  MKT 
Sbjct: 82  A--LEGYDWNNQIDDMNNNNNYYYYHNYDAVSTEEGISSSSKSRMSEETS---MDMMKTQ 141

Query: 123 EVEAFSTPNYNNYCYEH--PNSSSSSSKHQFH-----AEFLADKQTILSLSRKLPLSSGR 182
           EV+ +STP   NY YEH  PNSSSSS+  + H     AEFLADK++I S+SR LP+S+G 
Sbjct: 142 EVDTYSTP---NYYYEHYDPNSSSSSNSSKLHKVEAEAEFLADKESIFSISRNLPISTGF 201

Query: 183 GSETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSA 242
                        +PFALVKPGG+EGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSA
Sbjct: 202 FF---------FFHPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSA 261

Query: 243 DGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
           DGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 262 DGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 268

BLAST of MS009014 vs. ExPASy Swiss-Prot
Match: Q6NLW5 (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 4.6e-13
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 0

Query: 174 GRGSETKNLKK--RKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRP 233
           GR S ++ + K    ++YPFA +KP GV G +TL DINQKI  PP +P  H        P
Sbjct: 211 GRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEP 270

Query: 234 CVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
            V       SGK VV  T+I T+G +GSITI+RT+G
Sbjct: 271 AV-IQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

BLAST of MS009014 vs. ExPASy TrEMBL
Match: A0A6J1CZC7 (uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015652 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.8e-148
Identity = 266/267 (99.63%), Postives = 266/267 (99.63%), Query Frame = 0

Query: 1   MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSY 60
           MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSY
Sbjct: 17  MDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSY 76

Query: 61  WSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMK 120
           WSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMK
Sbjct: 77  WSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMK 136

Query: 121 TPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETK 180
           TPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSG GSETK
Sbjct: 137 TPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGGGSETK 196

Query: 181 NLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGL 240
           NLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGL
Sbjct: 197 NLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGL 256

Query: 241 SGKAVVALTRIHTQGRRGSITIIRTKG 268
           SGKAVVALTRIHTQGRRGSITIIRTKG
Sbjct: 257 SGKAVVALTRIHTQGRRGSITIIRTKG 283

BLAST of MS009014 vs. ExPASy TrEMBL
Match: A0A0A0KMV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 6.2e-77
Identity = 172/273 (63.00%), Postives = 198/273 (72.53%), Query Frame = 0

Query: 3   AATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWS 62
           A     A  +DPCFSP +STGYLEDALVE+TSKRRRL  +D  H       FQFPQ   +
Sbjct: 23  AIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHH----FFHFQFPQ---T 82

Query: 63  SYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTSPKSRIS-EETNYTDVSAMKT 122
           SY  W    D      D  N  Y + NY A+S DE IS+SPKSR+S EET+  D+  MKT
Sbjct: 83  SYDYWNNQID------DINNDYYYYYNYHAISTDEGISSSPKSRLSNEETSMEDM--MKT 142

Query: 123 PEVEAFSTPNY------NNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGR 182
            +VE +STPNY       ++ + HPNSSSSSS      +F AD+++I S+S  LP+S+G 
Sbjct: 143 QDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSH--KFEADQKSIFSMSTNLPISTGD 202

Query: 183 GS-ETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVS 242
           G  E K  KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVS
Sbjct: 203 GEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVS 262

Query: 243 ADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
           ADGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 263 ADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

BLAST of MS009014 vs. ExPASy TrEMBL
Match: A0A5A7VPU6 (Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00570 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.8e-76
Identity = 169/272 (62.13%), Postives = 196/272 (72.06%), Query Frame = 0

Query: 9   AVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWG 68
           A  +DPCFSP +STGYLEDAL+E+TSKRRRL      H+ +   QF+FPQ   SSY  W 
Sbjct: 6   AAVIDPCFSPAISTGYLEDALLEYTSKRRRL-----DHDQHHFFQFEFPQ---SSYHYWN 65

Query: 69  ADADNASDTFDWTNQIYDFNNYDAVSA-----------DELISTSPKSRISEETNYTDVS 128
              D      D  N  Y + NYDA+S            DE IS+SPKSR+S E    + +
Sbjct: 66  HQID------DMNNDNYYYYNYDAISTGGFSLHYSIVIDEGISSSPKSRLSNEETSME-A 125

Query: 129 AMKTPEVEAFSTPN-YNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRG 188
            MKT +VE +STPN Y  + + HPNSSSSSS      +F AD+++I S+S  LP+S+G G
Sbjct: 126 IMKTQDVETYSTPNYYYEHHHHHPNSSSSSSSKSH--KFEADQKSIFSMSTNLPISTGDG 185

Query: 189 S-ETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSA 248
             ETK  KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSA
Sbjct: 186 EIETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSA 245

Query: 249 DGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
           DGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 246 DGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 260

BLAST of MS009014 vs. ExPASy TrEMBL
Match: A0A6J1JNH2 (uncharacterized protein LOC111486907 OS=Cucurbita maxima OX=3661 GN=LOC111486907 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 2.0e-75
Identity = 160/256 (62.50%), Postives = 185/256 (72.27%), Query Frame = 0

Query: 14  PCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWGADADN 73
           P   P +STGYLEDAL+EFTSKR R    DH H    + Q +FP SYWSS CTW  DA N
Sbjct: 20  PSSPPPISTGYLEDALLEFTSKRPRF---DHHH----LLQLEFPHSYWSSCCTWEGDAFN 79

Query: 74  ASDTFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSA--MKTPEVEAFSTPN 133
           +++  D  N  YD+  YD VS DE+ + SPKSRIS+ETN TD+S   MKTPE+EAFSTPN
Sbjct: 80  STNHIDHINDNYDYYYYDTVSPDEMFAASPKSRISDETN-TDLSMGDMKTPEIEAFSTPN 139

Query: 134 YNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETKNLKKRKVVYPF 193
           +  Y            +HQ  AEFL  KQ         P+S+  GS TK  KKRKVVYPF
Sbjct: 140 HFYY------------EHQADAEFLPCKQ---------PISTDGGSVTKRAKKRKVVYPF 199

Query: 194 ALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRI 253
            LVKPGG++GDITLNDIN+ +LMPPTRPVRHPVGDFACRPCVSA+GPGLSGKAVVALT+I
Sbjct: 200 ELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSGKAVVALTKI 246

Query: 254 HTQGRRGSITIIRTKG 268
           HT+GRRGSITIIRT+G
Sbjct: 260 HTRGRRGSITIIRTRG 246

BLAST of MS009014 vs. ExPASy TrEMBL
Match: A0A1S3CSB7 (LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=3656 GN=LOC103504140 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 3.2e-73
Identity = 164/266 (61.65%), Postives = 191/266 (71.80%), Query Frame = 0

Query: 9   AVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWG 68
           A  +DPCFSP +STGYLEDAL+E+TSKRRRL   DH       DQ  F          + 
Sbjct: 6   AAVIDPCFSPAISTGYLEDALLEYTSKRRRL---DH-------DQHHF----------FN 65

Query: 69  ADADNASDTFDWTN-----QIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMKTPE 128
            ++  A      T       IY + NYDA+S DE IS+SPKSR+S E    + + MKT +
Sbjct: 66  LNSHKALTIIGTTKLMIXIMIYYYYNYDAISTDEGISSSPKSRLSNEETSME-AIMKTQD 125

Query: 129 VEAFSTPN-YNNYCYEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGS-ETKN 188
           VE +STPN Y  + + HPNSSSSSS      +F AD+++I S+S  LP+S+G G  ETK 
Sbjct: 126 VETYSTPNYYYEHHHHHPNSSSSSSSKSH--KFEADQKSIFSMSTNLPISTGDGEIETKK 185

Query: 189 LKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLS 248
            KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLS
Sbjct: 186 AKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLS 245

Query: 249 GKAVVALTRIHTQGRRGSITIIRTKG 268
           GKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 246 GKAVVALTKIHTQGRRGTITIIRTKG 248

BLAST of MS009014 vs. TAIR 10
Match: AT1G14630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 125 Blast hits to 123 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 149.1 bits (375), Expect = 5.2e-36
Identity = 104/251 (41.43%), Postives = 128/251 (51.00%), Query Frame = 0

Query: 19  ELSTGYLEDALVEFT--SKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWGADADNASD 78
           ++STGYLEDAL+EF+  SKRRRL  N                         GA+ D   +
Sbjct: 49  DVSTGYLEDALIEFSGRSKRRRLSFN-------------------------GAE-DKPDN 108

Query: 79  TFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMKTPEVEAFSTPNYNNYC 138
             D +   +  +   + ++ +    SP S I                          N C
Sbjct: 109 DLDHSQNHWGLSENYSCTSSQFADESPNSSI--------------------------NIC 168

Query: 139 YEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETKNLKKRKVVYPFALVKP 198
            E    SS SS++ F                    SS    +    +K++VVYPF +VKP
Sbjct: 169 SE--EKSSISSRNSFEP------------------SSSTSKKNDYDEKKRVVYPFGVVKP 226

Query: 199 GGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGR 258
           GG E DITLNDIN++ILMP  RPVRHPVGDFACRPCVSADGPGLSGKAVVA T+I T G 
Sbjct: 229 GGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVAFTKIQTLG- 226

Query: 259 RGSITIIRTKG 268
           RG+ITIIRTKG
Sbjct: 289 RGTITIIRTKG 226

BLAST of MS009014 vs. TAIR 10
Match: AT2G01990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits to 118 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 146.7 bits (369), Expect = 2.6e-35
Identity = 109/258 (42.25%), Postives = 131/258 (50.78%), Query Frame = 0

Query: 19  ELSTGYLEDALVEF--TSKRRRLLLNDHIHNNNLVDQFQFPQSYWSSYCTWGADADNASD 78
           ++STGYLEDAL+E    SKRRRLL  D   + N  D          S   WG        
Sbjct: 18  DVSTGYLEDALIESGERSKRRRLLFEDPSKSFNDDD----------SQNDWGL------- 77

Query: 79  TFDWTNQIYDFNNYDAVSADELISTSPKSRISEETNYTDVSAMKTPEVEAFSTPNYNNYC 138
                       +Y  ++                      S   TP V      +  +YC
Sbjct: 78  ----------HESYSCLN----------------------SQFVTPHVNTGERISGVSYC 137

Query: 139 -------YEHPNSSSSSSKHQFHAEFLADKQTILSLSRKLPLSSGRGSETKNLKKRKVVY 198
                  YE P++S S            DK  +   S   P SS  G++ K L   K+VY
Sbjct: 138 QETISNVYESPDTSVS-----------YDKIYVREKSPTEPSSSNCGNKNKRL-ITKLVY 197

Query: 199 PFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALT 258
           PF LVKPGG E D+TLNDIN++ILM P+RP+RHPVGDFA RPCVS  GPGLSGKAVVALT
Sbjct: 198 PFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALT 213

Query: 259 RIHTQGRRGSITIIRTKG 268
           +I TQG RG+ITIIRTKG
Sbjct: 258 KIQTQG-RGTITIIRTKG 213

BLAST of MS009014 vs. TAIR 10
Match: AT5G48720.1 (x-ray induced transcript 1 )

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-14
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 0

Query: 174 GRGSETKNLKK--RKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRP 233
           GR S ++ + K    ++YPFA +KP GV G +TL DINQKI  PP +P  H        P
Sbjct: 177 GRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEP 236

Query: 234 CVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
            V       SGK VV  T+I T+G +GSITI+RT+G
Sbjct: 237 AV-IQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 266

BLAST of MS009014 vs. TAIR 10
Match: AT5G48720.2 (x-ray induced transcript 1 )

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-14
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 0

Query: 174 GRGSETKNLKK--RKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVRHPVGDFACRP 233
           GR S ++ + K    ++YPFA +KP GV G +TL DINQKI  PP +P  H        P
Sbjct: 211 GRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEP 270

Query: 234 CVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 268
            V       SGK VV  T+I T+G +GSITI+RT+G
Sbjct: 271 AV-IQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146436.13.6e-14899.63uncharacterized protein LOC111015652 [Momordica charantia][more]
XP_004151416.11.3e-7663.00uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hypothetical ... [more]
KAA0067591.13.7e-7662.13protein XRI1 [Cucumis melo var. makuwa][more]
XP_022989840.14.1e-7562.50uncharacterized protein LOC111486907 [Cucurbita maxima][more]
XP_038874964.11.0e-7361.40uncharacterized protein LOC120067481 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q6NLW54.6e-1345.83Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1CZC71.8e-14899.63uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A0A0KMV06.2e-7763.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1[more]
A0A5A7VPU61.8e-7662.13Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00570 P... [more]
A0A6J1JNH22.0e-7562.50uncharacterized protein LOC111486907 OS=Cucurbita maxima OX=3661 GN=LOC111486907... [more]
A0A1S3CSB73.2e-7361.65LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=365... [more]
Match NameE-valueIdentityDescription
AT1G14630.15.2e-3641.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G01990.12.6e-3542.25unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G48720.13.3e-1445.83x-ray induced transcript 1 [more]
AT5G48720.23.3e-1445.83x-ray induced transcript 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33385:SF18XRI1-LIKE PROTEINcoord: 12..267
IPR039933Protein XRI1PANTHERPTHR33385PROTEIN XRI1coord: 12..267

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS009014.1MS009014.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007143 female meiotic nuclear division
biological_process GO:0007140 male meiotic nuclear division