MS008925 (gene) Bitter gourd (TR) v1

Overview


Name	MS008925
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	polygalacturonase inhibitor-like
Location	scaffold446: 6329 .. 6820 (+)
RNA-Seq Expression	MS008925
Synteny	MS008925

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTATCATCTCCCTCACCATCTTCGCGGACGACAAACTCTCCGGCCAAATCCCCCCGGTGGTCGGCGATCTCCCATTCCTCGAAACCCTGATGCTCCACAAGCTCCCCAATCTCACCGGCCCCATCCCCGCCGCCGTCGCCAATCTCCGCAACCTCAAATCCCTCGACCTCAGCTGGAACGGCCTCTCCGGTCCGGTCCCGGAGTTCCTCGGCTCCCTCTCCTCCCTCACTTACCTCGACCTCTCCTTCAACAATCTCACCGGGTCCATCCCGAGCTCCCTCGCCAACCTCCAGCGCCTAGGCGCTCTCCACTTGGACCGCAACAAGTTAACCGGCCCCATCCCGCACTCCTTCGGATACTTCAAGGGAAAAATACCCTACCTTTACCTCTCCCACAACCAACTGTCCGGAAAAATCCCAGCTTCCTTGGGGAGGGTGAATTTCAATGTGATTGATCTGTCCAGGAACAAACTCGAGGGCGATGCGTCGGTG

mRNA sequence

CGTATCATCTCCCTCACCATCTTCGCGGACGACAAACTCTCCGGCCAAATCCCCCCGGTGGTCGGCGATCTCCCATTCCTCGAAACCCTGATGCTCCACAAGCTCCCCAATCTCACCGGCCCCATCCCCGCCGCCGTCGCCAATCTCCGCAACCTCAAATCCCTCGACCTCAGCTGGAACGGCCTCTCCGGTCCGGTCCCGGAGTTCCTCGGCTCCCTCTCCTCCCTCACTTACCTCGACCTCTCCTTCAACAATCTCACCGGGTCCATCCCGAGCTCCCTCGCCAACCTCCAGCGCCTAGGCGCTCTCCACTTGGACCGCAACAAGTTAACCGGCCCCATCCCGCACTCCTTCGGATACTTCAAGGGAAAAATACCCTACCTTTACCTCTCCCACAACCAACTGTCCGGAAAAATCCCAGCTTCCTTGGGGAGGGTGAATTTCAATGTGATTGATCTGTCCAGGAACAAACTCGAGGGCGATGCGTCGGTG

Coding sequence (CDS)

CGTATCATCTCCCTCACCATCTTCGCGGACGACAAACTCTCCGGCCAAATCCCCCCGGTGGTCGGCGATCTCCCATTCCTCGAAACCCTGATGCTCCACAAGCTCCCCAATCTCACCGGCCCCATCCCCGCCGCCGTCGCCAATCTCCGCAACCTCAAATCCCTCGACCTCAGCTGGAACGGCCTCTCCGGTCCGGTCCCGGAGTTCCTCGGCTCCCTCTCCTCCCTCACTTACCTCGACCTCTCCTTCAACAATCTCACCGGGTCCATCCCGAGCTCCCTCGCCAACCTCCAGCGCCTAGGCGCTCTCCACTTGGACCGCAACAAGTTAACCGGCCCCATCCCGCACTCCTTCGGATACTTCAAGGGAAAAATACCCTACCTTTACCTCTCCCACAACCAACTGTCCGGAAAAATCCCAGCTTCCTTGGGGAGGGTGAATTTCAATGTGATTGATCTGTCCAGGAACAAACTCGAGGGCGATGCGTCGGTG

Protein sequence

RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWNGLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGYFKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV

Homology

[Close]

BLAST of MS008925 vs. NCBI nr
Match: XP_022151650.1 (polygalacturonase inhibitor-like [Momordica charantia] >ARM53420.1 pgip1 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 1.9e-86
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANL NLKSLDLSWN
Sbjct: 68  RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLHNLKSLDLSWN 127

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY
Sbjct: 128 GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 187

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV
Sbjct: 188 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 231

[Close]

BLAST of MS008925 vs. NCBI nr
Match: XP_022151649.1 (polygalacturonase inhibitor-like [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 2.0e-72
Identity = 138/164 (84.15%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RIISLTIFADD+LSGQIPP VGDLPFLETLMLHKLPNL+G +PAAVA+LRNLK LDLS N
Sbjct: 74  RIISLTIFADDQLSGQIPPAVGDLPFLETLMLHKLPNLSGTVPAAVADLRNLKFLDLSRN 133

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGPVPEFLGSL++LT+LDLSFNN TG++PSSLA+LQRLGALHLDRNKLTG IPHSFGY
Sbjct: 134 GLSGPVPEFLGSLANLTFLDLSFNNFTGAVPSSLADLQRLGALHLDRNKLTGQIPHSFGY 193

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKG+IP LYLSHNQLSG+IP SL  ++FNVIDLSRNKL+GDAS+
Sbjct: 194 FKGEIPDLYLSHNQLSGEIPTSLAGMDFNVIDLSRNKLQGDASM 237

[Close]

BLAST of MS008925 vs. NCBI nr
Match: ARM53421.1 (pgip2 [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 2.0e-72
Identity = 138/164 (84.15%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RIISLTIFADD+LSGQIPP VGDLPFLETLMLHKLPNL+G +PAAVA+LRNLK LDLS N
Sbjct: 74  RIISLTIFADDQLSGQIPPAVGDLPFLETLMLHKLPNLSGTVPAAVADLRNLKFLDLSRN 133

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGPVPEFLGSL++LT+LDLSFNN TG++PSSLA+LQRLGALHLDRNKLTG IPHSFGY
Sbjct: 134 GLSGPVPEFLGSLANLTFLDLSFNNFTGAVPSSLADLQRLGALHLDRNKLTGQIPHSFGY 193

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKG+IP LYLSHNQLSG+IP SL  ++FNVIDLSRNKL+GDAS+
Sbjct: 194 FKGEIPDLYLSHNQLSGEIPTSLAGMDFNVIDLSRNKLQGDASM 237

[Close]

BLAST of MS008925 vs. NCBI nr
Match: XP_038880971.1 (polygalacturonase inhibitor-like [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 5.4e-70
Identity = 135/164 (82.32%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RII+LTIFADDKL GQIPP VGDLPFLE LM HKLPNL GPIP  +A L  LK LDLSWN
Sbjct: 77  RIIALTIFADDKLKGQIPPSVGDLPFLENLMFHKLPNLVGPIPPTIAKLHKLKYLDLSWN 136

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSG +P FL SLS L YLDLSFN LTGSIPSSLANL+ LG LHLDRNKLTGPIP SFG 
Sbjct: 137 GLSGSIPSFLDSLSDLDYLDLSFNRLTGSIPSSLANLRHLGTLHLDRNKLTGPIPDSFGN 196

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKGKIPYLYLSHNQLSGKIPAS+G V+FN IDLSRNKLEGDASV
Sbjct: 197 FKGKIPYLYLSHNQLSGKIPASMGGVDFNYIDLSRNKLEGDASV 240

[Close]

BLAST of MS008925 vs. NCBI nr
Match: NP_001303611.1 (polygalacturonase inhibitor-like precursor [Cucumis melo] >AAP41199.1 polygalacturonase-inhibiting protein [Cucumis melo] >KAA0053950.1 polygalacturonase inhibitor-like precursor [Cucumis melo var. makuwa] >TYK04261.1 polygalacturonase inhibitor-like precursor [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 5.4e-70
Identity = 132/164 (80.49%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RII+LTIFADD+LSG IPP VGDLPFLE LM HKLPNLTGPIP  +A L NLK LDLSWN
Sbjct: 66  RIIALTIFADDELSGPIPPFVGDLPFLENLMFHKLPNLTGPIPPTIAKLHNLKYLDLSWN 125

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGP+P FLGSLS+L  LDLSFN  TGSIPSSLANL+RLG LHLDRNKLTGPIP SFG 
Sbjct: 126 GLSGPIPSFLGSLSNLDILDLSFNRFTGSIPSSLANLRRLGTLHLDRNKLTGPIPDSFGN 185

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKGK+PYLYLSHNQLSGKIP S+G+V+FN IDLSRNKL GD S+
Sbjct: 186 FKGKVPYLYLSHNQLSGKIPTSMGKVDFNYIDLSRNKLVGDGSL 229

[Close]

BLAST of MS008925 vs. ExPASy Swiss-Prot
Match: Q05091 (Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 8.4e-58
Identity = 115/164 (70.12%), Postives = 130/164 (79.27%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RI SLTIFA  ++SGQIP +VGDLP+LETL  HK PNLTGPI  A+A L+ LKSL LSW 
Sbjct: 71  RINSLTIFA-GQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWT 130

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            LSG VP+FL  L +LT+LDLSFNNLTG+IPSSL+ L  LGAL LDRNKLTG IP SFG 
Sbjct: 131 NLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQ 190

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           F G +P LYLSHNQLSG IP S  +++F  IDLSRNKLEGDASV
Sbjct: 191 FIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLEGDASV 233

[Close]

BLAST of MS008925 vs. ExPASy Swiss-Prot
Match: A7PW81 (Polygalacturonase inhibitor OS=Vitis vinifera OX=29760 GN=pgip PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.7e-55
Identity = 111/164 (67.68%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RI SLTIF+  +LSGQIP  VGDLPFLETL+  KL NLTG IP A+A L++LK + LSW 
Sbjct: 74  RINSLTIFS-GQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWT 133

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            LSGPVP F   L +LTYLDLSFNNL+G IP SL+ L  LGALHLDRN LTGPIP SFG 
Sbjct: 134 NLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGK 193

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           F G  P L+LSHNQLSGKIP S    + NV+DLSRNKLEGD S+
Sbjct: 194 FAGSTPGLHLSHNQLSGKIPYSFRGFDPNVMDLSRNKLEGDLSI 236

[Close]

BLAST of MS008925 vs. ExPASy Swiss-Prot
Match: Q9M5J8 (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 8.2e-53
Identity = 104/164 (63.41%), Postives = 126/164 (76.83%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R+ SL I  D ++SGQIPP VGDLP+L +L+  KL NLTG I   +A L+NL  L LSW 
Sbjct: 71  RVTSL-IIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWT 130

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            L+GPVPEFL  L +L Y+DLSFN+L+GSIPSSL++L++L  L L RNKLTGPIP SFG 
Sbjct: 131 NLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGT 190

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           F GK+P L+LSHNQLSG IP SLG  +F  IDLSRNKL+GDAS+
Sbjct: 191 FSGKVPSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQGDASI 233

[Close]

BLAST of MS008925 vs. ExPASy Swiss-Prot
Match: Q9M5J9 (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PGIP1 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-51
Identity = 100/164 (60.98%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R+ +LTIF+  ++SGQIP  VGDLP+LETL+  KL NLTG I   +A L+NL+ L LSW 
Sbjct: 71  RVTALTIFS-GQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWT 130

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            L+GP+P+F+  L +L +L+LSFN+L+GSIPSSL+ L ++ AL L RNKLTG IP SFG 
Sbjct: 131 NLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGS 190

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           F G +P L LSHNQLSG IP SLG ++FN IDLSRNKL+GDAS+
Sbjct: 191 FPGTVPDLRLSHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASM 233

[Close]

BLAST of MS008925 vs. ExPASy Swiss-Prot
Match: Q9LH52 (Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-40
Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R+  L++    ++SGQI   +GDL  L TL    LP+LTG IP  +  L+NL +L L   
Sbjct: 67  RVTGLSV-TSGEVSGQISYQIGDLVDLRTLDFSYLPHLTGNIPRTITKLKNLNTLYLKHT 126

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            LSGP+P+++  L SLT+LDLSFN  TG IP SL+ + +L A+ ++ NKLTG IP+SFG 
Sbjct: 127 SLSGPIPDYISELKSLTFLDLSFNQFTGPIPGSLSQMPKLEAIQINDNKLTGSIPNSFGS 186

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDA 163
           F G +P LYLS+N+LSGKIP SL + +FN +DLS N  EGDA
Sbjct: 187 FVGNVPNLYLSNNKLSGKIPESLSKYDFNAVDLSGNGFEGDA 227

[Close]

BLAST of MS008925 vs. ExPASy TrEMBL
Match: A0A1W6IYG8 (Pgip1 OS=Momordica charantia OX=3673 GN=LOC111019559 PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.0e-87
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANL NLKSLDLSWN
Sbjct: 68  RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLHNLKSLDLSWN 127

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY
Sbjct: 128 GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 187

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV
Sbjct: 188 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 231

[Close]

BLAST of MS008925 vs. ExPASy TrEMBL
Match: A0A6J1DDN9 (polygalacturonase inhibitor-like OS=Momordica charantia OX=3673 GN=LOC111019558 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.6e-73
Identity = 138/164 (84.15%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RIISLTIFADD+LSGQIPP VGDLPFLETLMLHKLPNL+G +PAAVA+LRNLK LDLS N
Sbjct: 74  RIISLTIFADDQLSGQIPPAVGDLPFLETLMLHKLPNLSGTVPAAVADLRNLKFLDLSRN 133

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGPVPEFLGSL++LT+LDLSFNN TG++PSSLA+LQRLGALHLDRNKLTG IPHSFGY
Sbjct: 134 GLSGPVPEFLGSLANLTFLDLSFNNFTGAVPSSLADLQRLGALHLDRNKLTGQIPHSFGY 193

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKG+IP LYLSHNQLSG+IP SL  ++FNVIDLSRNKL+GDAS+
Sbjct: 194 FKGEIPDLYLSHNQLSGEIPTSLAGMDFNVIDLSRNKLQGDASM 237

[Close]

BLAST of MS008925 vs. ExPASy TrEMBL
Match: A0A1W6IYI7 (Pgip2 OS=Momordica charantia OX=3673 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.6e-73
Identity = 138/164 (84.15%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RIISLTIFADD+LSGQIPP VGDLPFLETLMLHKLPNL+G +PAAVA+LRNLK LDLS N
Sbjct: 74  RIISLTIFADDQLSGQIPPAVGDLPFLETLMLHKLPNLSGTVPAAVADLRNLKFLDLSRN 133

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGPVPEFLGSL++LT+LDLSFNN TG++PSSLA+LQRLGALHLDRNKLTG IPHSFGY
Sbjct: 134 GLSGPVPEFLGSLANLTFLDLSFNNFTGAVPSSLADLQRLGALHLDRNKLTGQIPHSFGY 193

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKG+IP LYLSHNQLSG+IP SL  ++FNVIDLSRNKL+GDAS+
Sbjct: 194 FKGEIPDLYLSHNQLSGEIPTSLAGMDFNVIDLSRNKLQGDASM 237

[Close]

BLAST of MS008925 vs. ExPASy TrEMBL
Match: Q7X9Q7 (Polygalacturonase-inhibiting protein OS=Cucumis melo OX=3656 GN=LOC103499550 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70
Identity = 132/164 (80.49%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RII+LTIFADD+LSG IPP VGDLPFLE LM HKLPNLTGPIP  +A L NLK LDLSWN
Sbjct: 66  RIIALTIFADDELSGPIPPFVGDLPFLENLMFHKLPNLTGPIPPTIAKLHNLKYLDLSWN 125

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGP+P FLGSLS+L  LDLSFN  TGSIPSSLANL+RLG LHLDRNKLTGPIP SFG 
Sbjct: 126 GLSGPIPSFLGSLSNLDILDLSFNRFTGSIPSSLANLRRLGTLHLDRNKLTGPIPDSFGN 185

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKGK+PYLYLSHNQLSGKIP S+G+V+FN IDLSRNKL GD S+
Sbjct: 186 FKGKVPYLYLSHNQLSGKIPTSMGKVDFNYIDLSRNKLVGDGSL 229

[Close]

BLAST of MS008925 vs. ExPASy TrEMBL
Match: A0A5D3BX47 (Polygalacturonase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4559G00050 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70
Identity = 132/164 (80.49%), Postives = 143/164 (87.20%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           RII+LTIFADD+LSG IPP VGDLPFLE LM HKLPNLTGPIP  +A L NLK LDLSWN
Sbjct: 66  RIIALTIFADDELSGPIPPFVGDLPFLENLMFHKLPNLTGPIPPTIAKLHNLKYLDLSWN 125

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
           GLSGP+P FLGSLS+L  LDLSFN  TGSIPSSLANL+RLG LHLDRNKLTGPIP SFG 
Sbjct: 126 GLSGPIPSFLGSLSNLDILDLSFNRFTGSIPSSLANLRRLGTLHLDRNKLTGPIPDSFGN 185

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           FKGK+PYLYLSHNQLSGKIP S+G+V+FN IDLSRNKL GD S+
Sbjct: 186 FKGKVPYLYLSHNQLSGKIPTSMGKVDFNYIDLSRNKLVGDGSL 229

[Close]

BLAST of MS008925 vs. TAIR 10
Match: AT5G06870.1 (polygalacturonase inhibiting protein 2 )

HSP 1 Score: 208.0 bits (528), Expect = 5.8e-54
Identity = 104/164 (63.41%), Postives = 126/164 (76.83%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R+ SL I  D ++SGQIPP VGDLP+L +L+  KL NLTG I   +A L+NL  L LSW 
Sbjct: 71  RVTSL-IIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWT 130

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            L+GPVPEFL  L +L Y+DLSFN+L+GSIPSSL++L++L  L L RNKLTGPIP SFG 
Sbjct: 131 NLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGT 190

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           F GK+P L+LSHNQLSG IP SLG  +F  IDLSRNKL+GDAS+
Sbjct: 191 FSGKVPSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQGDASI 233

[Close]

BLAST of MS008925 vs. TAIR 10
Match: AT5G06860.1 (polygalacturonase inhibiting protein 1 )

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-52
Identity = 100/164 (60.98%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R+ +LTIF+  ++SGQIP  VGDLP+LETL+  KL NLTG I   +A L+NL+ L LSW 
Sbjct: 71  RVTALTIFS-GQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWT 130

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            L+GP+P+F+  L +L +L+LSFN+L+GSIPSSL+ L ++ AL L RNKLTG IP SFG 
Sbjct: 131 NLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGS 190

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDASV 165
           F G +P L LSHNQLSG IP SLG ++FN IDLSRNKL+GDAS+
Sbjct: 191 FPGTVPDLRLSHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASM 233

[Close]

BLAST of MS008925 vs. TAIR 10
Match: AT3G12145.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-41
Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R+  L++    ++SGQI   +GDL  L TL    LP+LTG IP  +  L+NL +L L   
Sbjct: 67  RVTGLSV-TSGEVSGQISYQIGDLVDLRTLDFSYLPHLTGNIPRTITKLKNLNTLYLKHT 126

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
            LSGP+P+++  L SLT+LDLSFN  TG IP SL+ + +L A+ ++ NKLTG IP+SFG 
Sbjct: 127 SLSGPIPDYISELKSLTFLDLSFNQFTGPIPGSLSQMPKLEAIQINDNKLTGSIPNSFGS 186

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVNFNVIDLSRNKLEGDA 163
           F G +P LYLS+N+LSGKIP SL + +FN +DLS N  EGDA
Sbjct: 187 FVGNVPNLYLSNNKLSGKIPESLSKYDFNAVDLSGNGFEGDA 227

[Close]

BLAST of MS008925 vs. TAIR 10
Match: AT3G11080.1 (receptor like protein 35 )

HSP 1 Score: 115.2 bits (287), Expect = 5.1e-26
Identity = 68/165 (41.21%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 1   RIISLTIFADDKLSGQIPPVVGDLPFLETLMLHKLPNLTGPIPAAVANLRNLKSLDLSWN 60
           R++ LT    + L G+IP  +G+L  L +L L       G IP+++ NL  L SL LS N
Sbjct: 128 RVLDLT---QNDLDGEIPSSIGNLSHLTSLHL-SYNQFLGLIPSSIENLSRLTSLHLSSN 187

Query: 61  GLSGPVPEFLGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGY 120
             SG +P  +G+LS LT L+LS N  +G IPSS+ NL  L  L L  N   G IP S G 
Sbjct: 188 QFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGN 247

Query: 121 FKGKIPYLYLSHNQLSGKIPASLGRVN-FNVIDLSRNKLEGDASV 165
              ++ YLYLS+N   G+IP+S G +N   V+ +  NKL G+  +
Sbjct: 248 L-ARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPI 287

[Close]

BLAST of MS008925 vs. TAIR 10
Match: AT4G08850.1 (Leucine-rich repeat receptor-like protein kinase family protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-25
Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 11  DKLSGQIPPVVGDLPFLETLMLHKLPN-LTGPIPAAVANLRNLKSLDLSWNGLSGPVPEF 70
           ++L G+IPP +GDL  L+T  LH + N L G IP+ +  L  +  + +  N L+GP+P  
Sbjct: 152 NQLVGEIPPELGDLSNLDT--LHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSS 211

Query: 71  LGSLSSLTYLDLSFNNLTGSIPSSLANLQRLGALHLDRNKLTGPIPHSFGYFKGKIPYLY 130
            G+L+ L  L L  N+L+GSIPS + NL  L  L LDRN LTG IP SFG  K  +  L 
Sbjct: 212 FGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLK-NVTLLN 271

Query: 131 LSHNQLSGKIPASLGRVN-FNVIDLSRNKLEG 161
           +  NQLSG+IP  +G +   + + L  NKL G
Sbjct: 272 MFENQLSGEIPPEIGNMTALDTLSLHTNKLTG 300

The following BLAST results are available for this feature:

BLAST of MS008925 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151650.1	1.9e-86	99.39	polygalacturonase inhibitor-like [Momordica charantia] >ARM53420.1 pgip1 [Momord...	[more]
XP_022151649.1	2.0e-72	84.15	polygalacturonase inhibitor-like [Momordica charantia]	[more]
ARM53421.1	2.0e-72	84.15	pgip2 [Momordica charantia]	[more]
XP_038880971.1	5.4e-70	82.32	polygalacturonase inhibitor-like [Benincasa hispida]	[more]
NP_001303611.1	5.4e-70	80.49	polygalacturonase inhibitor-like precursor [Cucumis melo] >AAP41199.1 polygalact...	[more]

BLAST of MS008925 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05091	8.4e-58	70.12	Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1	[more]
A7PW81	8.7e-55	67.68	Polygalacturonase inhibitor OS=Vitis vinifera OX=29760 GN=pgip PE=1 SV=1	[more]
Q9M5J8	8.2e-53	63.41	Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PGIP2 PE=2 SV=2	[more]
Q9M5J9	2.0e-51	60.98	Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PGIP1 PE=1 SV=1	[more]
Q9LH52	1.6e-40	51.23	Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 ...	[more]

BLAST of MS008925 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1W6IYG8	9.0e-87	99.39	Pgip1 OS=Momordica charantia OX=3673 GN=LOC111019559 PE=2 SV=1	[more]
A0A6J1DDN9	9.6e-73	84.15	polygalacturonase inhibitor-like OS=Momordica charantia OX=3673 GN=LOC111019558 ...	[more]
A0A1W6IYI7	9.6e-73	84.15	Pgip2 OS=Momordica charantia OX=3673 PE=2 SV=1	[more]
Q7X9Q7	2.6e-70	80.49	Polygalacturonase-inhibiting protein OS=Cucumis melo OX=3656 GN=LOC103499550 PE=...	[more]
A0A5D3BX47	2.6e-70	80.49	Polygalacturonase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of MS008925 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06870.1	5.8e-54	63.41	polygalacturonase inhibiting protein 2	[more]
AT5G06860.1	1.4e-52	60.98	polygalacturonase inhibiting protein 1	[more]
AT3G12145.1	1.1e-41	51.23	Leucine-rich repeat (LRR) family protein	[more]
AT3G11080.1	5.1e-26	41.21	receptor like protein 35	[more]
AT4G08850.1	2.5e-25	43.42	Leucine-rich repeat receptor-like protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 52..65 score: 54.04 coord: 73..86 score: 54.6
None	No IPR available	PANTHER	PTHR48059:SF10	POLYGALACTURONASE INHIBITOR 2	coord: 1..164
None	No IPR available	PANTHER	PTHR48059	POLYGALACTURONASE INHIBITOR 1	coord: 1..164
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 12..161
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 127..144 e-value: 1.0 score: 10.2
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 50..110 e-value: 7.3E-9 score: 35.3
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 75..98 score: 7.419328
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 3..164 e-value: 5.0E-47 score: 162.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008925.1	MS008925.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding