MS008782 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAAATCTTCAGAAACCACGACGACGATGGCGACGGGCGCCTCAACGCCGACGAGCTCACCGAAGCCTTCCGCTACATCGGTGCATTTCTCCCCTCCTACAGAGCTCGCCACGCCCTTTTCCACACTGATTCCGATCGAGATGGATTCATCGGCGAGAAAGATTTCGAATCTCTCCTTAATTATGCCGAGAAACGTAAATACACCATCATT ATGGCTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAAATCTTCAGAAACCACGACGACGATGGCGACGGGCGCCTCAACGCCGACGAGCTCACCGAAGCCTTCCGCTACATCGGTGCATTTCTCCCCTCCTACAGAGCTCGCCACGCCCTTTTCCACACTGATTCCGATCGAGATGGATTCATCGGCGAGAAAGATTTCGAATCTCTCCTTAATTATGCCGAGAAACGTAAATACACCATCATT ATGGCTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAAATCTTCAGAAACCACGACGACGATGGCGACGGGCGCCTCAACGCCGACGAGCTCACCGAAGCCTTCCGCTACATCGGTGCATTTCTCCCCTCCTACAGAGCTCGCCACGCCCTTTTCCACACTGATTCCGATCGAGATGGATTCATCGGCGAGAAAGATTTCGAATCTCTCCTTAATTATGCCGAGAAACGTAAATACACCATCATT MARKGKQYRPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII Homology
BLAST of MS008782 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.5 bits (371), Expect = 5.4e-32 Identity = 75/90 (83.33%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of MS008782 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 146.7 bits (369), Expect = 9.1e-32 Identity = 74/90 (82.22%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of MS008782 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.1 bits (362), Expect = 5.9e-31 Identity = 73/88 (82.95%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of MS008782 vs. NCBI nr
Match: KGN55185.1 (hypothetical protein Csa_012915 [Cucumis sativus]) HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30 Identity = 71/90 (78.89%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of MS008782 vs. NCBI nr
Match: KAA0064376.1 (putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK20211.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]) HSP 1 Score: 137.1 bits (344), Expect = 7.2e-29 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of MS008782 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-07 Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of MS008782 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of MS008782 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04 Identity = 21/68 (30.88%), Postives = 36/68 (52.94%), Query Frame = 0
BLAST of MS008782 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04 Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of MS008782 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2) HSP 1 Score: 44.7 bits (104), Expect = 6.4e-04 Identity = 18/66 (27.27%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of MS008782 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.3e-31 Identity = 71/90 (78.89%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of MS008782 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of MS008782 vs. ExPASy TrEMBL
Match: A0A5A7UY46 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00260 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of MS008782 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.7e-13 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of MS008782 vs. ExPASy TrEMBL
Match: A0A5N6RQV2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of MS008782 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 ) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-08 Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of MS008782 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 44.7 bits (104), Expect = 4.6e-05 Identity = 18/66 (27.27%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of MS008782 vs. TAIR 10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04 Identity = 19/60 (31.67%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of MS008782 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family ) HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04 Identity = 19/65 (29.23%), Postives = 36/65 (55.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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