MS008690 (gene) Bitter gourd (TR) v1

Overview


Name	MS008690
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein SOB FIVE-LIKE 6-like
Location	scaffold4: 3134670 .. 3135405 (-)
RNA-Seq Expression	MS008690
Synteny	MS008690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATTGGTCTTCTGCACATTATTGCAGTGGAGGTGAATCAGGCTGGACTATGTACTTGGACCAATCCTATGATTCCGAGCATCGTTTCGGTGGCGGCGGTGTCGGGGAGAATTATAGGGAAAAAGAGGCAAAAGTAAGAACAGAGGAGGAGGATGAAGAAGAAGATCTATCAATGGTGTCCGATGCCTCCTCAGGTCCACCACATTACCTTGAAGATAACGAGGGATACTTTTACAATAATGGGTACTCTTCTTATGCCTATTCAGCTGCAGAATCAGCAGCAAACTGTAAAGAGGAGAAGAAGAAGAAGGGGAAAAAACATGGGAGAAATCAGCAACATTCTTACCTTGATGACACTGCAAGCTCCCCTGTATATGGCTATGGAAAAGCAAGTGTAAAAAAACAGTTCCATTAGAAATTTCTCTCAAAATCTAATGAAAATTTCTATCAATCTTATGTTGGTGATTGTATCTAATGCAGAAAATCAATGCTGCACCAAGTAATGAAGATTCGGAGGAGAATGCAGTGGATTTTTCTCAGGGATTCTCTGCGACCCACTTTAAGGTAAGTTCTTCTTCTTCTTCTTCTTCCAGTTGAACTTTGGGGATTATAATTGAACAAGTTCTTCCATGTCCTATTGACTAAAAAAATGGAGCTTTTAAACACAGAGAAAATCTTCACTGAGGAAGCACATGGGTTTTTGTCGCTCTGAAAAATCAGCACCAGAAGAA

mRNA sequence

ATGAATGATTGGTCTTCTGCACATTATTGCAGTGGAGGTGAATCAGGCTGGACTATGTACTTGGACCAATCCTATGATTCCGAGCATCGTTTCGGTGGCGGCGGTGTCGGGGAGAATTATAGGGAAAAAGAGGCAAAAGTAAGAACAGAGGAGGAGGATGAAGAAGAAGATCTATCAATGGTGTCCGATGCCTCCTCAGGTCCACCACATTACCTTGAAGATAACGAGGGATACTTTTACAATAATGGGTACTCTTCTTATGCCTATTCAGCTGCAGAATCAGCAGCAAACTGTAAAGAGGAGAAGAAGAAGAAGGGGAAAAAACATGGGAGAAATCAGCAACATTCTTACCTTGATGACACTGCAAGCTCCCCTGTATATGGCTATGGAAAAGCAAGTAAAATCAATGCTGCACCAAGTAATGAAGATTCGGAGGAGAATGCAGTGGATTTTTCTCAGGGATTCTCTGCGACCCACTTTAAGAGAAAATCTTCACTGAGGAAGCACATGGGTTTTTGTCGCTCTGAAAAATCAGCACCAGAAGAA

Coding sequence (CDS)

ATGAATGATTGGTCTTCTGCACATTATTGCAGTGGAGGTGAATCAGGCTGGACTATGTACTTGGACCAATCCTATGATTCCGAGCATCGTTTCGGTGGCGGCGGTGTCGGGGAGAATTATAGGGAAAAAGAGGCAAAAGTAAGAACAGAGGAGGAGGATGAAGAAGAAGATCTATCAATGGTGTCCGATGCCTCCTCAGGTCCACCACATTACCTTGAAGATAACGAGGGATACTTTTACAATAATGGGTACTCTTCTTATGCCTATTCAGCTGCAGAATCAGCAGCAAACTGTAAAGAGGAGAAGAAGAAGAAGGGGAAAAAACATGGGAGAAATCAGCAACATTCTTACCTTGATGACACTGCAAGCTCCCCTGTATATGGCTATGGAAAAGCAAGTAAAATCAATGCTGCACCAAGTAATGAAGATTCGGAGGAGAATGCAGTGGATTTTTCTCAGGGATTCTCTGCGACCCACTTTAAGAGAAAATCTTCACTGAGGAAGCACATGGGTTTTTGTCGCTCTGAAAAATCAGCACCAGAAGAA

Protein sequence

MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSMVSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAPEE

Homology

[Close]

BLAST of MS008690 vs. NCBI nr
Match: XP_022139584.1 (uncharacterized protein LOC111010447 isoform X1 [Momordica charantia])

HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60
           MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120
           VSDASSGPPHYLEDNEGY YNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120

Query: 121 TASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180
           TASSPVYGYGKASKINAAPSNE SEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP
Sbjct: 121 TASSPVYGYGKASKINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180

Query: 181 EE 183
           EE
Sbjct: 181 EE 182

[Close]

BLAST of MS008690 vs. NCBI nr
Match: XP_022139592.1 (uncharacterized protein LOC111010447 isoform X2 [Momordica charantia])

HSP 1 Score: 350.9 bits (899), Expect = 6.6e-93
Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60
           MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120
           VSDASSGPPHYLEDNEGY YNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120

Query: 121 TASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180
           TASSPVYGYGK  KINAAPSNE SEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP
Sbjct: 121 TASSPVYGYGK--KINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180

Query: 181 EE 183
           EE
Sbjct: 181 EE 180

[Close]

BLAST of MS008690 vs. NCBI nr
Match: XP_038897152.1 (protein SOB FIVE-LIKE 6-like [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-73
Identity = 149/189 (78.84%), Postives = 161/189 (85.19%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRF----GGGGVGENYREKEAKVRTEEEDEEE 60
           MNDWSS HYCSG ESGWTMYLDQSY S+H F    G GGVGENY+ KEAK RTE+EDEEE
Sbjct: 1   MNDWSSTHYCSGSESGWTMYLDQSYTSDHHFCGSGGDGGVGENYKAKEAKARTEQEDEEE 60

Query: 61  DLSMVSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEE---KKKKGKKHGRNQ 120
           DLSMVSDASSGPPHY+EDNE  FY NGYSSYA+SA+ESA NC +E   K KKGK++GRNQ
Sbjct: 61  DLSMVSDASSGPPHYIEDNEELFYTNGYSSYAFSASESAINCNKEEIKKGKKGKQNGRNQ 120

Query: 121 QHSYLDDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFC 180
           QHSYLDDTASSPVYGY K SKIN A SN+  EEN VDFSQGFSATHFKRKS+LRKH+GF 
Sbjct: 121 QHSYLDDTASSPVYGYSKPSKINVAISNKALEENPVDFSQGFSATHFKRKSALRKHLGFY 180

Query: 181 RSEKSAPEE 183
           RSEKSAPEE
Sbjct: 181 RSEKSAPEE 189

[Close]

BLAST of MS008690 vs. NCBI nr
Match: XP_022977119.1 (uncharacterized protein LOC111477282 [Cucurbita maxima])

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69
Identity = 146/185 (78.92%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60
           MNDWS+ HYCSGGESGWTMYLDQSY S+HRFGGG  G     KEAK R EE D EEDLSM
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDG----VKEAKARAEEAD-EEDLSM 60

Query: 61  VSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKK---HGRNQQHSY 120
           VSDASSGPPHYLEDNE  FYNNGYSSYAYSA++S  NC +E+KKK KK   +GRNQQ SY
Sbjct: 61  VSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSY 120

Query: 121 LDDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEK 180
           LDDTASSPVYGYGKASKI AA SN+ SEEN VDFSQGFSATHFKRKS++RKH+GF RSEK
Sbjct: 121 LDDTASSPVYGYGKASKIKAAASNKASEENPVDFSQGFSATHFKRKSAMRKHLGFYRSEK 180

Query: 181 SAPEE 183
           SAPEE
Sbjct: 181 SAPEE 180

[Close]

BLAST of MS008690 vs. NCBI nr
Match: XP_008452653.1 (PREDICTED: uncharacterized protein LOC103493609 [Cucumis melo] >KAA0064452.1 uncharacterized protein E6C27_scaffold255G001660 [Cucumis melo var. makuwa] >TYK20137.1 uncharacterized protein E5676_scaffold134G002630 [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRF-GGGGVGENYREKEAKVRT-EEEDEEEDL 60
           MNDWS+ HYCSG ESGWTMYLDQSY S+HRF GG G  ENY+ KEAK RT EEEDEEEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYL 120
           SMVSDASSGPPHY+EDNE  FYNNGYSSYA SA+E     + +K +KGK++GRNQQHSYL
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASE----LERKKSQKGKRNGRNQQHSYL 120

Query: 121 DDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKS 180
           DDTASSPVYGY KA+KIN A SN+  EEN VDFSQGFSATHFKRKS+LRKH+GF RSEKS
Sbjct: 121 DDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSALRKHLGFYRSEKS 180

Query: 181 APEE 183
           APEE
Sbjct: 181 APEE 180

[Close]

BLAST of MS008690 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.3e-14
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 11  SGGESGWTMYLDQSYDSEHRF---GGGGVGENYREKEA----KVRTEEEDEEEDLSMVSD 70
           SG ESGWT+YLDQS  S          G     R K++     V  EEE+EE+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDDTAS 130
           ASSGP +  E++         S    +       CK EKK++  +    + +S LDDTAS
Sbjct: 66  ASSGPRNISEED---------SVKKINIVGLKKQCKREKKRRDYE----KMNSLLDDTAS 125

Query: 131 SPVYGYGK--ASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSE 177
           SP++ +       +      +   E+ +D+SQGFSAT F+ K++ ++  G+   E
Sbjct: 126 SPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQCGYLHME 167

[Close]

BLAST of MS008690 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-08
Identity = 54/158 (34.18%), Postives = 80/158 (50.63%), Query Frame = 0


Query: 3   DWSSAHYCSGGESGWTMYLDQSYD-SEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSMV 62
           D+S   Y   G+SGWTMYL  S   S H F       +Y   E K     ++ +ED SMV
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHF-------DYHNGETK-----QEHDEDSSMV 61

Query: 63  SDASSGPPHYLED--NEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQ-HSYL 122
           SDASSGPP+Y E+  +E +   N      Y     + N  + KKK  ++ G +++ +S  
Sbjct: 62  SDASSGPPYYCEETVHEDHLQQN----TQYWCKSKSKNKNKNKKKVHEEQGYSERFNSSF 121

Query: 123 DDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFS 157
           DDTASS   G     +++A   +++  +   DF Q +S
Sbjct: 122 DDTASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYS 139

[Close]

BLAST of MS008690 vs. ExPASy TrEMBL
Match: A0A6J1CDG6 (uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010447 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60
           MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120
           VSDASSGPPHYLEDNEGY YNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120

Query: 121 TASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180
           TASSPVYGYGKASKINAAPSNE SEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP
Sbjct: 121 TASSPVYGYGKASKINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180

Query: 181 EE 183
           EE
Sbjct: 181 EE 182

[Close]

BLAST of MS008690 vs. ExPASy TrEMBL
Match: A0A6J1CED8 (uncharacterized protein LOC111010447 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010447 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60
           MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120
           VSDASSGPPHYLEDNEGY YNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDD 120

Query: 121 TASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180
           TASSPVYGYGK  KINAAPSNE SEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP
Sbjct: 121 TASSPVYGYGK--KINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKSAP 180

Query: 181 EE 183
           EE
Sbjct: 181 EE 180

[Close]

BLAST of MS008690 vs. ExPASy TrEMBL
Match: A0A6J1IQJ9 (uncharacterized protein LOC111477282 OS=Cucurbita maxima OX=3661 GN=LOC111477282 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 146/185 (78.92%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60
           MNDWS+ HYCSGGESGWTMYLDQSY S+HRFGGG  G     KEAK R EE D EEDLSM
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDG----VKEAKARAEEAD-EEDLSM 60

Query: 61  VSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKK---HGRNQQHSY 120
           VSDASSGPPHYLEDNE  FYNNGYSSYAYSA++S  NC +E+KKK KK   +GRNQQ SY
Sbjct: 61  VSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSY 120

Query: 121 LDDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEK 180
           LDDTASSPVYGYGKASKI AA SN+ SEEN VDFSQGFSATHFKRKS++RKH+GF RSEK
Sbjct: 121 LDDTASSPVYGYGKASKIKAAASNKASEENPVDFSQGFSATHFKRKSAMRKHLGFYRSEK 180

Query: 181 SAPEE 183
           SAPEE
Sbjct: 181 SAPEE 180

[Close]

BLAST of MS008690 vs. ExPASy TrEMBL
Match: A0A5D3D989 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002630 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.2e-69
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRF-GGGGVGENYREKEAKVRT-EEEDEEEDL 60
           MNDWS+ HYCSG ESGWTMYLDQSY S+HRF GG G  ENY+ KEAK RT EEEDEEEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYL 120
           SMVSDASSGPPHY+EDNE  FYNNGYSSYA SA+E     + +K +KGK++GRNQQHSYL
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASE----LERKKSQKGKRNGRNQQHSYL 120

Query: 121 DDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKS 180
           DDTASSPVYGY KA+KIN A SN+  EEN VDFSQGFSATHFKRKS+LRKH+GF RSEKS
Sbjct: 121 DDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSALRKHLGFYRSEKS 180

Query: 181 APEE 183
           APEE
Sbjct: 181 APEE 180

[Close]

BLAST of MS008690 vs. ExPASy TrEMBL
Match: A0A1S3BVI5 (uncharacterized protein LOC103493609 OS=Cucumis melo OX=3656 GN=LOC103493609 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.2e-69
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRF-GGGGVGENYREKEAKVRT-EEEDEEEDL 60
           MNDWS+ HYCSG ESGWTMYLDQSY S+HRF GG G  ENY+ KEAK RT EEEDEEEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYL 120
           SMVSDASSGPPHY+EDNE  FYNNGYSSYA SA+E     + +K +KGK++GRNQQHSYL
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASE----LERKKSQKGKRNGRNQQHSYL 120

Query: 121 DDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEKS 180
           DDTASSPVYGY KA+KIN A SN+  EEN VDFSQGFSATHFKRKS+LRKH+GF RSEKS
Sbjct: 121 DDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSALRKHLGFYRSEKS 180

Query: 181 APEE 183
           APEE
Sbjct: 181 APEE 180

[Close]

BLAST of MS008690 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-15
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 11  SGGESGWTMYLDQSYDSEHRF---GGGGVGENYREKEA----KVRTEEEDEEEDLSMVSD 70
           SG ESGWT+YLDQS  S          G     R K++     V  EEE+EE+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEDNEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQHSYLDDTAS 130
           ASSGP +  E++         S    +       CK EKK++  +    + +S LDDTAS
Sbjct: 66  ASSGPRNISEED---------SVKKINIVGLKKQCKREKKRRDYE----KMNSLLDDTAS 125

Query: 131 SPVYGYGK--ASKINAAPSNEDSEENAVDFSQGFSATHFKRKSSLRKHMGFCRSE 177
           SP++ +       +      +   E+ +D+SQGFSAT F+ K++ ++  G+   E
Sbjct: 126 SPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQCGYLHME 167

[Close]

BLAST of MS008690 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.8e-09
Identity = 54/158 (34.18%), Postives = 80/158 (50.63%), Query Frame = 0


Query: 3   DWSSAHYCSGGESGWTMYLDQSYD-SEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSMV 62
           D+S   Y   G+SGWTMYL  S   S H F       +Y   E K     ++ +ED SMV
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHF-------DYHNGETK-----QEHDEDSSMV 61

Query: 63  SDASSGPPHYLED--NEGYFYNNGYSSYAYSAAESAANCKEEKKKKGKKHGRNQQ-HSYL 122
           SDASSGPP+Y E+  +E +   N      Y     + N  + KKK  ++ G +++ +S  
Sbjct: 62  SDASSGPPYYCEETVHEDHLQQN----TQYWCKSKSKNKNKNKKKVHEEQGYSERFNSSF 121

Query: 123 DDTASSPVYGYGKASKINAAPSNEDSEENAVDFSQGFS 157
           DDTASS   G     +++A   +++  +   DF Q +S
Sbjct: 122 DDTASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYS 139

The following BLAST results are available for this feature:

BLAST of MS008690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139584.1	3.2e-95	98.90	uncharacterized protein LOC111010447 isoform X1 [Momordica charantia]	[more]
XP_022139592.1	6.6e-93	97.80	uncharacterized protein LOC111010447 isoform X2 [Momordica charantia]	[more]
XP_038897152.1	3.4e-73	78.84	protein SOB FIVE-LIKE 6-like [Benincasa hispida]	[more]
XP_022977119.1	2.3e-69	78.92	uncharacterized protein LOC111477282 [Cucurbita maxima]	[more]
XP_008452653.1	1.5e-68	77.72	PREDICTED: uncharacterized protein LOC103493609 [Cucumis melo] >KAA0064452.1 unc...	[more]

BLAST of MS008690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	6.3e-14	35.43	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]
B6IDH8	6.8e-08	34.18	Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1	[more]

BLAST of MS008690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDG6	1.5e-95	98.90	uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CED8	3.2e-93	97.80	uncharacterized protein LOC111010447 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IQJ9	1.1e-69	78.92	uncharacterized protein LOC111477282 OS=Cucurbita maxima OX=3661 GN=LOC111477282...	[more]
A0A5D3D989	7.2e-69	77.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BVI5	7.2e-69	77.72	uncharacterized protein LOC103493609 OS=Cucumis melo OX=3656 GN=LOC103493609 PE=...	[more]

BLAST of MS008690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	4.5e-15	35.43	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G58460.1	4.8e-09	34.18	unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..152
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 1..178
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008690.1	MS008690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process