Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCT
mRNA sequence
ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCT
Coding sequence (CDS)
ATGAAATTGGGCAGAGATGCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAGGCT
Protein sequence
MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKETWVGRDLFSRSRSWKA
Homology
BLAST of MS008269 vs. NCBI nr
Match:
XP_022147766.1 (uncharacterized protein LOC111016595 [Momordica charantia])
HSP 1 Score: 594.0 bits (1530), Expect = 7.8e-166
Identity = 316/322 (98.14%), Postives = 316/322 (98.14%), Query Frame = 0
Query: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA
Sbjct: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
Query: 61 ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR
Sbjct: 61 ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQE 180
RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEED EEEEEEEEGKSQE
Sbjct: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEED-EEEEEEEEGKSQE 180
Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSW 240
NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSW
Sbjct: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSW 240
Query: 241 QEEEEEEEEEEEEEEE-----AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS 300
QEEEEEEEEEEEEEEE AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS
Sbjct: 241 QEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS 300
Query: 301 SEIAKETWVGRDLFSRSRSWKA 318
SEIAKETWVGRDLFSRSRSWKA
Sbjct: 301 SEIAKETWVGRDLFSRSRSWKA 321
BLAST of MS008269 vs. NCBI nr
Match:
XP_038898663.1 (transcription initiation factor IIE subunit alpha [Benincasa hispida])
HSP 1 Score: 438.0 bits (1125), Expect = 7.1e-119
Identity = 249/330 (75.45%), Postives = 276/330 (83.64%), Query Frame = 0
Query: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
MKLGR+ K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R SHRH+HRRRK SA
Sbjct: 1 MKLGRENKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLSHRHYHRRRK--SA 60
Query: 61 ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK + KSWQSVMEEIERIHNRRKLRR
Sbjct: 61 ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLRR 120
Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQE 180
RR +WVESLGFKKDIMQFLTCLRNIRFDFRCF+AFP DFTTEEE+EEEEEEEE KSQ
Sbjct: 121 RRFHWVESLGFKKDIMQFLTCLRNIRFDFRCFRAFPATDFTTEEEEEEEEEEEE--KSQG 180
Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESN----------GPPLAPPKNALLLM 240
NQVGV+ NESSRTAFSKWFMVLQE+G SN + RES +APPKNALLLM
Sbjct: 181 NQVGVDENESSRTAFSKWFMVLQENG-SNELKRESKILCSDDDVSIEAAMAPPKNALLLM 240
Query: 241 RCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD 300
RCRSAPAK W EEE EEEE+++++ +++++EVKVKKSLKWLMEEENRERLVME G D
Sbjct: 241 RCRSAPAKRWLEEESEEEEDDDDD----DDEKEEVKVKKSLKWLMEEENRERLVMETGTD 300
Query: 301 FCRMSSEIAKETWV----GRDLFSRSRSWK 317
FCRM+S+IAKETWV RDLF+RS SWK
Sbjct: 301 FCRMTSDIAKETWVVSEKSRDLFTRSHSWK 319
BLAST of MS008269 vs. NCBI nr
Match:
XP_004142611.2 (transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637.1 hypothetical protein Csa_012410 [Cucumis sativus])
HSP 1 Score: 403.3 bits (1035), Expect = 2.0e-108
Identity = 231/327 (70.64%), Postives = 268/327 (81.96%), Query Frame = 0
Query: 1 MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
MKL R+ +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R +R +HRRRK S
Sbjct: 11 MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRK--S 70
Query: 61 AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK + KSWQSVMEEIERIHNRRKLR
Sbjct: 71 AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 130
Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQ 180
RRR NW+ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEEE +
Sbjct: 131 RRRFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEE--EE 190
Query: 181 ENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNG----------PPLAPPKNALLL 240
+NQVG+E NESSRTAFSKWFMVLQE+G SN + R+SN +APP+NALLL
Sbjct: 191 KNQVGIEENESSRTAFSKWFMVLQENG-SNELKRDSNSRCYEDDESIEATMAPPRNALLL 250
Query: 241 MRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGP 300
MRC+SAPA+ W EEE EEE++E+E+ E+++++VKVKKSLKWLMEEENRER+VMEMG
Sbjct: 251 MRCKSAPARRWMEEESEEEDDEKEK----EKEKEKVKVKKSLKWLMEEENRERVVMEMGT 310
Query: 301 DFCRMSSEIAKETWVGRDLFSRSRSWK 317
DFCRM S+ AKE F+RS+SWK
Sbjct: 311 DFCRMISDNAKE-------FTRSQSWK 319
BLAST of MS008269 vs. NCBI nr
Match:
XP_008444111.1 (PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa] >TYK18616.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa])
HSP 1 Score: 397.5 bits (1020), Expect = 1.1e-106
Identity = 231/326 (70.86%), Postives = 257/326 (78.83%), Query Frame = 0
Query: 1 MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R HR HRRRK S
Sbjct: 8 MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 67
Query: 61 AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK + KSWQSVMEEIERIHNRRKLR
Sbjct: 68 AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 127
Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQ 180
RRR WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+E
Sbjct: 128 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDE---- 187
Query: 181 ENQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLM 240
+NQVG+E NESSRTAFSKWFMVLQE+G+ S +C ES +APP NALLLM
Sbjct: 188 KNQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLM 247
Query: 241 RCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD 300
RCRSAPA+ W EEE EE ++E+E +VKVKKSLKWLMEEENRERLV+EMG D
Sbjct: 248 RCRSAPARRWMEEESEEGDDEKE----------KVKVKKSLKWLMEEENRERLVVEMGTD 307
Query: 301 FCRMSSEIAKETWVGRDLFSRSRSWK 317
FCRM+S+ AKE F+RS+SWK
Sbjct: 308 FCRMTSDNAKE-------FTRSQSWK 308
BLAST of MS008269 vs. NCBI nr
Match:
XP_023523446.1 (uncharacterized protein LOC111787660 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 360.1 bits (923), Expect = 1.9e-95
Identity = 211/318 (66.35%), Postives = 236/318 (74.21%), Query Frame = 0
Query: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHR-HHHRRRKSTS 60
MKLGR+AK I S DLLVCFPSRS L LMP PLCSP RG DS+KLRRS R +HHRRRK S
Sbjct: 68 MKLGREAKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRK--S 127
Query: 61 AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
A SP++WAK KTMGSE+SEPSSPKVTCAGQ+K+R K + + WQSVMEEIERIHNRRKLR
Sbjct: 128 AESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRK--NRERWQSVMEEIERIHNRRKLR 187
Query: 121 RRRS-NWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKS 180
RRR NWVESLGFKKDIMQ LTCLR++RFDFRCF+AFPEADFTTEE+++EEEEEEEE +
Sbjct: 188 RRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEE 247
Query: 181 QENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAK 240
+E +ESSR AFSKWFMVLQE+ NG C + P+APPKNALLLMRCRSAPAK
Sbjct: 248 EE-------SESSRAAFSKWFMVLQENRMMNG-CAVDDDAPVAPPKNALLLMRCRSAPAK 307
Query: 241 SWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEI 300
SW E EK K KKSLKWLMEEENRERL ME G + R S
Sbjct: 308 SWVE-------------------EKVKKKKKSLKWLMEEENRERLAMEKGTEISRTS--- 344
Query: 301 AKETWVGRDLFSRSRSWK 317
W+ +RSRSWK
Sbjct: 368 --PYWL-----TRSRSWK 344
BLAST of MS008269 vs. ExPASy TrEMBL
Match:
A0A6J1D3C2 (uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016595 PE=4 SV=1)
HSP 1 Score: 594.0 bits (1530), Expect = 3.8e-166
Identity = 316/322 (98.14%), Postives = 316/322 (98.14%), Query Frame = 0
Query: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA
Sbjct: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
Query: 61 ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR
Sbjct: 61 ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQE 180
RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEED EEEEEEEEGKSQE
Sbjct: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEED-EEEEEEEEGKSQE 180
Query: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSW 240
NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSW
Sbjct: 181 NQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSW 240
Query: 241 QEEEEEEEEEEEEEEE-----AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS 300
QEEEEEEEEEEEEEEE AAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS
Sbjct: 241 QEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMS 300
Query: 301 SEIAKETWVGRDLFSRSRSWKA 318
SEIAKETWVGRDLFSRSRSWKA
Sbjct: 301 SEIAKETWVGRDLFSRSRSWKA 321
BLAST of MS008269 vs. ExPASy TrEMBL
Match:
A0A0A0L1Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1)
HSP 1 Score: 403.3 bits (1035), Expect = 9.4e-109
Identity = 231/327 (70.64%), Postives = 268/327 (81.96%), Query Frame = 0
Query: 1 MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
MKL R+ +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R +R +HRRRK S
Sbjct: 1 MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRK--S 60
Query: 61 AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK + KSWQSVMEEIERIHNRRKLR
Sbjct: 61 AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 120
Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQ 180
RRR NW+ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEEE +
Sbjct: 121 RRRFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEE--EE 180
Query: 181 ENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNG----------PPLAPPKNALLL 240
+NQVG+E NESSRTAFSKWFMVLQE+G SN + R+SN +APP+NALLL
Sbjct: 181 KNQVGIEENESSRTAFSKWFMVLQENG-SNELKRDSNSRCYEDDESIEATMAPPRNALLL 240
Query: 241 MRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGP 300
MRC+SAPA+ W EEE EEE++E+E+ E+++++VKVKKSLKWLMEEENRER+VMEMG
Sbjct: 241 MRCKSAPARRWMEEESEEEDDEKEK----EKEKEKVKVKKSLKWLMEEENRERVVMEMGT 300
Query: 301 DFCRMSSEIAKETWVGRDLFSRSRSWK 317
DFCRM S+ AKE F+RS+SWK
Sbjct: 301 DFCRMISDNAKE-------FTRSQSWK 309
BLAST of MS008269 vs. ExPASy TrEMBL
Match:
A0A5D3D503 (Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001490 PE=4 SV=1)
HSP 1 Score: 397.5 bits (1020), Expect = 5.2e-107
Identity = 231/326 (70.86%), Postives = 257/326 (78.83%), Query Frame = 0
Query: 1 MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R HR HRRRK S
Sbjct: 8 MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 67
Query: 61 AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK + KSWQSVMEEIERIHNRRKLR
Sbjct: 68 AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 127
Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQ 180
RRR WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+E
Sbjct: 128 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDE---- 187
Query: 181 ENQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLM 240
+NQVG+E NESSRTAFSKWFMVLQE+G+ S +C ES +APP NALLLM
Sbjct: 188 KNQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLM 247
Query: 241 RCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD 300
RCRSAPA+ W EEE EE ++E+E +VKVKKSLKWLMEEENRERLV+EMG D
Sbjct: 248 RCRSAPARRWMEEESEEGDDEKE----------KVKVKKSLKWLMEEENRERLVVEMGTD 307
Query: 301 FCRMSSEIAKETWVGRDLFSRSRSWK 317
FCRM+S+ AKE F+RS+SWK
Sbjct: 308 FCRMTSDNAKE-------FTRSQSWK 308
BLAST of MS008269 vs. ExPASy TrEMBL
Match:
A0A1S3B949 (uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=4 SV=1)
HSP 1 Score: 397.5 bits (1020), Expect = 5.2e-107
Identity = 231/326 (70.86%), Postives = 257/326 (78.83%), Query Frame = 0
Query: 1 MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60
MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R HR HRRRK S
Sbjct: 8 MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 67
Query: 61 AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120
A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK + KSWQSVMEEIERIHNRRKLR
Sbjct: 68 AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 127
Query: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGKSQ 180
RRR WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+E
Sbjct: 128 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDE---- 187
Query: 181 ENQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLM 240
+NQVG+E NESSRTAFSKWFMVLQE+G+ S +C ES +APP NALLLM
Sbjct: 188 KNQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLM 247
Query: 241 RCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPD 300
RCRSAPA+ W EEE EE ++E+E +VKVKKSLKWLMEEENRERLV+EMG D
Sbjct: 248 RCRSAPARRWMEEESEEGDDEKE----------KVKVKKSLKWLMEEENRERLVVEMGTD 307
Query: 301 FCRMSSEIAKETWVGRDLFSRSRSWK 317
FCRM+S+ AKE F+RS+SWK
Sbjct: 308 FCRMTSDNAKE-------FTRSQSWK 308
BLAST of MS008269 vs. ExPASy TrEMBL
Match:
A0A2I4DXY3 (uncharacterized protein LOC108984494 OS=Juglans regia OX=51240 GN=LOC108984494 PE=4 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 3.5e-95
Identity = 216/341 (63.34%), Postives = 254/341 (74.49%), Query Frame = 0
Query: 4 GRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKST-- 63
GR+AKA SADLLVCFPSR++LTLMPKP+CSPAR + NK SH HHH ++ ST
Sbjct: 3 GREAKAAPSADLLVCFPSRAHLTLMPKPICSPARHSEPNKRHHSHHHHHHHHLKKASTRG 62
Query: 64 -SAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRK 123
ASPL+WAK K MGSEISEP+SPKVTCAGQIK+RPKT SCKSWQSVMEEIERIHN RK
Sbjct: 63 GGQASPLLWAKTKPMGSEISEPTSPKVTCAGQIKVRPKTSSCKSWQSVMEEIERIHNNRK 122
Query: 124 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGK 183
++R +WVE+LG KKDIMQFLTCLR+IRFDFRCF +FPE+D TTE+ED +EEE G+
Sbjct: 123 -HKKRPSWVEALGLKKDIMQFLTCLRSIRFDFRCFGSFPESDITTEDED----DEEEIGE 182
Query: 184 SQENQVGVE---GNESSRTAFSKWFMVLQESGASNGICR------------ESNGPPLAP 243
Q+N +G E GNE+SRTAFSKWFMVLQE+ +N +C+ ES AP
Sbjct: 183 CQDNHLGTERSDGNETSRTAFSKWFMVLQEN-QNNKLCKQEKRETKKTYDDESIAASAAP 242
Query: 244 PKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEAAEEDEKEVKVKKSLKWLMEEENRER 303
P NALLLMRCRSAPAK W E+E+EEEE EE+E+ E KEV+ KSLK LMEEE R +
Sbjct: 243 PPNALLLMRCRSAPAKGWLVEKEDEEEEGEEDED-EEGTGKEVRKAKSLKCLMEEEKRTK 302
Query: 304 ----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 317
+VM+ DF ++SS+IAKETWVG RD FSRSRSWK
Sbjct: 303 KENMVVMKYDTDFYKISSDIAKETWVGGGMRDPFSRSRSWK 336
BLAST of MS008269 vs. TAIR 10
Match:
AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )
HSP 1 Score: 255.4 bits (651), Expect = 6.1e-68
Identity = 174/340 (51.18%), Postives = 220/340 (64.71%), Query Frame = 0
Query: 11 HSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA-------ASP 70
+SADLLVCFPSR++L L PKP+CSP+R DS+ RR HHRR+ S + SP
Sbjct: 16 YSADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRP---HHRRQLSKLSGGGGGGHGSP 75
Query: 71 LIWAK---PKTM-GSEISEPSSPKVTCAGQIKIRPKT--GSCKSWQSVMEEIERIHNRRK 130
++WAK K M G EI+EP+SPKVTCAGQIK+RP G K+WQSVMEEIERIH+ R
Sbjct: 76 VLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRS 135
Query: 131 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGK 190
+ G KKD+M FLTCLRNI+FDFRCF F AD T+++++EE+++++EE
Sbjct: 136 QSK-------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDDDEE-- 195
Query: 191 SQENQVGVEGNESSRTAFSKWFMVLQE------SGASNGICRE------SNGPPLAPPKN 250
E V E E+S+T FSKWFMVLQE +N C E + P PP N
Sbjct: 196 --EEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPPN 255
Query: 251 ALLLMRCRSAPAKSWQEEE-----EEEEEEEEEEEEAAEEDEKEVKV-KKSLKWLMEEEN 310
ALLLMRCRSAPAKSW EE E+E+ EE++EE+ E+ E +K KK L+ LMEEE
Sbjct: 256 ALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLMEEEK 315
Query: 311 RERLVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 317
E ++M +F R+SS+IAKETWV +D SRSRSWK
Sbjct: 316 MELVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 341
BLAST of MS008269 vs. TAIR 10
Match:
AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )
HSP 1 Score: 198.7 bits (504), Expect = 6.8e-51
Identity = 150/333 (45.05%), Postives = 206/333 (61.86%), Query Frame = 0
Query: 1 MKLGRDAKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA 60
+K G + +SADL+VCFPSR++L+L K + SP+ + RR + HHRR S +
Sbjct: 2 IKGGGGKSSGYSADLMVCFPSRAHLSLPSKSISSPSSSFN----RRQNAPHHRRSISKLS 61
Query: 61 ASPLIWAKPKTMGSE-ISEPSSPKVTCAGQIKIR--PKTGSCKSWQSVMEEIERIHNRRK 120
+S + + G E + EP+SPKVTCAGQIK+R + G K+WQS+M EIE+IH
Sbjct: 62 SSGGGVRQNRGGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIH---- 121
Query: 121 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEEGK 180
R + + G K+D+M FLTCLR+ FDFRCF AFP D +++E+E+EEEEEE+ +
Sbjct: 122 ---RSKSESKFFGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEE 181
Query: 181 SQENQVGVEGNESSRTAFSKWFMVLQESGASNGICRE------SNGPPLAPPKNALLLMR 240
E +ESS T FSKW MVL E +N C + S+ PP NALLLMR
Sbjct: 182 EDE-------DESSGTVFSKWLMVLHEK-QNNEECVDGKENVFSDVETAVPPPNALLLMR 241
Query: 241 CRSAPAKSWQEEEEEEEEE-EEEEEEAAEEDEKE---VKVKKSLKWLMEEENRERL-VME 300
CRSAP K+W EE++EE EE + +++ EE+E+E V KK L+ LMEEE + L VM
Sbjct: 242 CRSAPVKNWSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNLVVMN 301
Query: 301 MGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 317
++ ++S++IAKETWV +D RSRSWK
Sbjct: 302 YDTNYYKLSNDIAKETWVVGGIQDPLFRSRSWK 313
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022147766.1 | 7.8e-166 | 98.14 | uncharacterized protein LOC111016595 [Momordica charantia] | [more] |
XP_038898663.1 | 7.1e-119 | 75.45 | transcription initiation factor IIE subunit alpha [Benincasa hispida] | [more] |
XP_004142611.2 | 2.0e-108 | 70.64 | transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637.... | [more] |
XP_008444111.1 | 1.1e-106 | 70.86 | PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 tra... | [more] |
XP_023523446.1 | 1.9e-95 | 66.35 | uncharacterized protein LOC111787660 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D3C2 | 3.8e-166 | 98.14 | uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
A0A0A0L1Z4 | 9.4e-109 | 70.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1 | [more] |
A0A5D3D503 | 5.2e-107 | 70.86 | Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. maku... | [more] |
A0A1S3B949 | 5.2e-107 | 70.86 | uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=... | [more] |
A0A2I4DXY3 | 3.5e-95 | 63.34 | uncharacterized protein LOC108984494 OS=Juglans regia OX=51240 GN=LOC108984494 P... | [more] |
Match Name | E-value | Identity | Description | |
AT1G78110.1 | 6.1e-68 | 51.18 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G22230.1 | 6.8e-51 | 45.05 | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... | [more] |