MS008199 (gene) Bitter gourd (TR) v1

Overview


Name	MS008199
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	chromatin structure-remodeling complex protein BSH
Location	scaffold45: 147085 .. 150965 (-)
RNA-Seq Expression	MS008199
Synteny	MS008199

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTTCGGCCTCAGCTCACTCAAAAACTCCTTTCAAGTTCAGGATGTGAGTTCTCTCTGCTTTCTAAGTTCAGTTTTGTTCTTTCCATTGATTCCTCTTTCATATGGTCTTATTTCTATTAACGTTTTCGATCATTTATTTGCCGAAACAATACTTTACGAAAGTCCGACTGCGGAGAATTTAGTGCCCATTCGTTTGGACATCGAAATCGACGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTTCTGGTATTCTTCTTCATTTACTTGGTTCATGCTTGTTCTGTTTCCTTCTAAATCAATGGTGATTGGGGTTCTTCAACTTTAGGGTTTATTTTTCCTGAGTTTATGGTTTTTGACTTGAAAAACTGAATTAATCTCTGTTTTTACCAGTGGTATTGCTGATACTTTCATGGAAAACTTGCAAACTTCATTTAGTTTTTATATCTGACTCTGAGTTTAACGTCTTTGGGCCTATTTGTTTTGGTGTAAACATTTAGGCCTGAAATAATGTTTTTTCATATAAGCATTAACTTGAAGATGCCTTTTCCTTTTCTATAATTTGGATGTCGGGCTCAATTCTCGCATTATGTTTATATCCTACCCCACTAATCTTCGGAGAGGCTTTGCCCGCTCCAAGGCAGCTTCAACTTTTAAGTTATTTATTTATTTTTTTTTAGTACAACAAGCGGGATTAGGATATTCGAACTCACTGACAAAGATGTCATGACAGGTGCCAATTACCGTTGAACTAAACTCATGCCGACAACTTTTAAGTTATTAACCCTTTAACTTGGGAGCTTGAATCAAGGAACTTAGTTAGGGGTTATCTTCAAACATCCCAAAACCCATAAGCATCCTTAAGGGTTAACTTGAAAATTTATCTTTTGCTCCTCTGATAATGTCTTCAATCACGTCATTATACTTTATGTTTACTCTAGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCCCCAGCATTTATGACACAAATTGCACAATCCATTCAAGTAAGAACAATAGTCATCTGAATTCCCTCTCCCACTCTTCATGGATTTGAATGGTCAGCCCAGACCATTTTTTTATAATTATTAGACACAACTTTTGACTTGAATCAACATTAGTAATCTCGACCTATCATCGAACTTACTCATGTTTTCTCTTGGGTTTCACTTTATCAGTCGCAACTTACAGAGTTTCGATCCTTTGAAGGTCAAGATATGTACACTGGCGAAAAGATTATTCCAATAAAGGTTTGTGTCTTTGGTGTTATAATGTCAATGTCTTGCTGACCTCCTACCTTTATCATTATTTTACTGCTTGATGTCAAGTAATGCTGTTATGTTTCTTCTCCAGCTTGATCTTCGAGTGAACAATACGCTCATAAAGGACCAGTTTCTTTGGGTAAAGTTGAACATAATCTTGAAACATTTGACTGGAACAAGTATTTGTCTAGCTTATGTGCACAAAATGATATGCCTTTTAGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGAACACTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGAGTAAGTAAAGGCTAATACAATATGAAGTTGTACCTAAGAATAAATTTTTGGTTCCATGTAAATTGGGTCCTCTGGTCATGAAAAGGCAGCATCCCTCTTTAAAGGGATGGATTGTCAATGGACTATTTTCACCTAAACTCTCTTTGTGCACGTCCTTCTCCAACTATTTGGTACCATGAGAGTTTTATTTATTCTTTTGTGAGGTAGCCTGCAGTTGCAGTTGCGATAAGAGAACAACTCTACGAGGTTGGTTCTTTCTTGTTCATTAAACCTTCTCTTTTCTAAAGACTATCTTTTTCAGTTTCTTTCGCCATCTGAATAATTTATTTCATTATTGCATCATCTGCACTGTGTCTATGTTCCAGATAGCAATGCAGAATGTAGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGGGGTTTTGAGCATGTTCCCGCAAGGTATCTACTTAGATATTCAAATTATGCACTATTCCTCATTAAATTCTCGTTTTTGATCAGGTGACTTGCAATGAGATTAATATTTACCTATATTCATCTGCATCTTGCAATTGTGCATCTTTCTCTGTTTGGTGCAACAGTAAAGTTGGAGGTGCTTCTGTGGACTTGGTGAAGTTATTTGGTCAAAGATCAAGTGTTGTTCGGTTAGTCTATTCCCTGTTGCTCCTATTGAGATTCCTTTCTTCTGTGATCTAAGAAGCTTTTGATCTATAAATCTTACACAATTATTTATTACTGCCAGTTATGTTTGTTTTCTACTATACTGTGTCTTTGTTTTCAAGAGAGAAAAAATTTAGGACCTGTTTGGTAACATTTCTATTTCTTGTTTCTCATTTCCTCTTTTATAAAAAATGAAAATAGAATTGCAACCAAGGGGCAATTGACAAGGGCTTGGGATCTCTTCGTTATACTAACTTAGAGGTCTAAAGTTCGAACCTTCTGATGAGCTTAATACCAAAAATCCTTGACGTCTTCAGGGTCCAGGCCTTGGTGTGAGCGCAGGTGCTTCGAGTATAGGGAGCAAAGCTCCGACTCCCAATTGTAAAAAAAAAATGCGTTAGATGACTATTTCTTGTTTCTTGTTCTTTCTTATTTTCTTTTTTATTGAAAAAAGAAATGAAGACATGTTTCATTCTCGTTTCTCGTTCTTTGAAAATTATAAATTAGAAAAATAAATATTTTATATGAAATAAAAAATTAAAACTTTTTTATGTTATATTTATTTGTTAATATTTATTATGCATTTTATAGGTTATGAAGGATAAAATAATGCTTTTATTTATTTTTTGGAGAAAACTGAAAATGAGAACAAAATATGAGAAACTCGATTTTGTTGTTATGTTTGTATCGAGAAACAAGAACAGTTAGTGGACGTTTATGTTTCTTAAAAACAAGAAACGAGAATGTTATCAAACGGATCTTCAACGGTGACAATATAAGGTTATAAATTTAGAGTGTGTCTGATTCTTGGGAACCATAAGAAGATGATCATGTGAATGACAACTTTTCTCCAGTTTTAAAAAGATTCCCAGATGTATGAGATTTATAGACATGCTGAGATGTCTTCATATGTGGGTATCTCTCTTCCATAAGACTTGGTGGCTTTGTTGGATTCCATATTTTGGGCATAACATAGAAGATATAATTTGTTGTTTGTTGTTTCCTTTTACTATTTTCCCAAGATTAAGTTATGCTTTTTAATATTATTTCGATAGTACTTCATGTTTGTTACTGATGTTCTCTCTCTATTACTGATAAATCTAAACTAACAACAATTATTTTATTTTGCAAATTTTTAAACAAACAATCTTTCTCCTAACATGTCGGAATGCCAATTACACTTATCGATTCTCAAGTATCGGTCTGAAAATTAGTTATAAATACTCTTCATCAGTAAAAAAGTCAAGTGAAACACACTCTTAGACCAATCTTCATAGCGATCAAGTATATTTAATAAGAGCTTAGATCATTATTCTTTTGGCTCTCAGTTTTTGTCTATTTTCACTTGACAGAGTCAGTGAACTTCATTTGGAAATGGATTATTTATTAATTTTAAAATTAACTATTAGTCTATTGGTATTAGTTTATTTCTAATATTTGTTGCAGCTGATTTGTGAGAATACAAAAGATTGATGATGCTTTGCTTATGGTAGATGCACTAAAATGCCACAGGAAAAGAAAGGACTGGGACATGTACGAACCAATTGTTGACCTTCTATCTAATGAAGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACTGCTCGA

mRNA sequence

ATGAAAGCTTCGGCCTCAGCTCACTCAAAAACTCCTTTCAAGTTCAGGATTCCGACTGCGGAGAATTTAGTGCCCATTCGTTTGGACATCGAAATCGACGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCCCCAGCATTTATGACACAAATTGCACAATCCATTCAATCGCAACTTACAGAGTTTCGATCCTTTGAAGGTCAAGATATGTACACTGGCGAAAAGATTATTCCAATAAAGCTTGATCTTCGAGTGAACAATACGCTCATAAAGGACCAGTTTCTTTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGAACACTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAGTTGCAGTTGCGATAAGAGAACAACTCTACGAGATAGCAATGCAGAATGTAGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGGGGTTTTGAGCATGTTCCCGCAAGTAAAGTTGGAGGTGCTTCTGTGGACTTGGTGAAGTTATTTGGTCAAAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATGTACGAACCAATTGTTGACCTTCTATCTAATGAAGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACTGCTCGA

Coding sequence (CDS)

ATGAAAGCTTCGGCCTCAGCTCACTCAAAAACTCCTTTCAAGTTCAGGATTCCGACTGCGGAGAATTTAGTGCCCATTCGTTTGGACATCGAAATCGACGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCCCCAGCATTTATGACACAAATTGCACAATCCATTCAATCGCAACTTACAGAGTTTCGATCCTTTGAAGGTCAAGATATGTACACTGGCGAAAAGATTATTCCAATAAAGCTTGATCTTCGAGTGAACAATACGCTCATAAAGGACCAGTTTCTTTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGAACACTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAGTTGCAGTTGCGATAAGAGAACAACTCTACGAGATAGCAATGCAGAATGTAGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGGGGTTTTGAGCATGTTCCCGCAAGTAAAGTTGGAGGTGCTTCTGTGGACTTGGTGAAGTTATTTGGTCAAAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATGTACGAACCAATTGTTGACCTTCTATCTAATGAAGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACTGCTCGA

Protein sequence

MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRGFEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR

Homology

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BLAST of MS008199 vs. NCBI nr
Match: XP_022138105.1 (chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia])

HSP 1 Score: 475.7 bits (1223), Expect = 2.3e-130
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240

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BLAST of MS008199 vs. NCBI nr
Match: XP_004147636.1 (chromatin structure-remodeling complex protein BSH [Cucumis sativus] >KGN57214.1 hypothetical protein Csa_010718 [Cucumis sativus])

HSP 1 Score: 460.7 bits (1184), Expect = 7.8e-126
Identity = 230/240 (95.83%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVP SK GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

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BLAST of MS008199 vs. NCBI nr
Match: XP_038898737.1 (chromatin structure-remodeling complex protein BSH [Benincasa hispida])

HSP 1 Score: 458.4 bits (1178), Expect = 3.9e-125
Identity = 228/240 (95.00%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVIFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMY+GEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYSGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRT CKDLGIEDPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVP SK GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of MS008199 vs. NCBI nr
Match: XP_008439008.1 (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo] >KAA0052145.1 chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo var. makuwa] >TYK05110.1 chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 457.6 bits (1176), Expect = 6.6e-125
Identity = 228/240 (95.00%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVP SK GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR 240

[Close]

BLAST of MS008199 vs. NCBI nr
Match: XP_022935705.1 (chromatin structure-remodeling complex protein BSH [Cucurbita moschata] >KAG6597599.1 Chromatin structure-remodeling complex protein BSH, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447.6 bits (1150), Expect = 6.8e-122
Identity = 223/240 (92.92%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK+SASA+SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNTLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRT CKDLGIEDPEVGPA+AVAIREQLYEIAMQNVASARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHV ASK GGASVDL+KLFG RSS VRKRKDWD+YEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240

[Close]

BLAST of MS008199 vs. ExPASy Swiss-Prot
Match: P93045 (Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana OX=3702 GN=BSH PE=1 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 6.4e-107
Identity = 192/240 (80.00%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RTLCKDLG+EDPEVGPAVA AIREQLYEIA+Q+VASARESR+SKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
            +H  ASK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Sbjct: 181 SDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR 240

[Close]

BLAST of MS008199 vs. ExPASy Swiss-Prot
Match: Q6DFM1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus tropicalis OX=8364 GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 20  AENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFMTQIAQSIQ 79
           +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+
Sbjct: 176 SEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIR 235

Query: 80  SQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDL 139
            Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ PE+F+  LC +L
Sbjct: 236 QQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL 295

Query: 140 GIEDPEVGPAVAVAIREQL 158
           G+   E    +A +IR QL
Sbjct: 296 GL-GGEFVTTIAYSIRGQL 312

[Close]

BLAST of MS008199 vs. ExPASy Swiss-Prot
Match: Q5U379 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A OS=Danio rerio OX=7955 GN=smarcb1a PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 56/138 (40.58%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 21  ENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFMTQIAQSIQS 80
           E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P  F+  IA +I+ 
Sbjct: 172 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQ 231

Query: 81  QLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLG 140
           Q+  + +    D    +++I IKL++ V N  + DQF WD++  E+ PE+F+  LC +LG
Sbjct: 232 QIESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG 291

Query: 141 IEDPEVGPAVAVAIREQL 158
           +   E    +A +IR QL
Sbjct: 292 L-GGEFVTTIAYSIRGQL 307

[Close]

BLAST of MS008199 vs. ExPASy Swiss-Prot
Match: Q6GQ82 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus laevis OX=8355 GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 21  ENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFMTQIAQSIQS 80
           E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ 
Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236

Query: 81  QLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLG 140
           Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ PE+F+  LC +LG
Sbjct: 237 QIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG 296

Query: 141 IEDPEVGPAVAVAIREQL 158
           +   E    +A +IR QL
Sbjct: 297 L-GGEFVTTIAYSIRGQL 312

[Close]

BLAST of MS008199 vs. ExPASy Swiss-Prot
Match: O42467 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Tetraodon fluviatilis OX=47145 GN=smarcb1 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.9e-19
Identity = 55/139 (39.57%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 20  AENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFMTQIAQSIQ 79
           +E LVPIRLD+EI+GQ+ +DAFTWN ++      +FA+    DL L P AF+  I  +I+
Sbjct: 171 SEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIR 230

Query: 80  SQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDL 139
            Q+  + +    +  T +++I IKL++ V N  + DQF WD++  E+ PE+F+  LC +L
Sbjct: 231 QQIESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL 290

Query: 140 GIEDPEVGPAVAVAIREQL 158
           G +  E    +A +IR QL
Sbjct: 291 G-QGGEFVTTIAYSIRGQL 307

[Close]

BLAST of MS008199 vs. ExPASy TrEMBL
Match: A0A6J1C8H9 (chromatin structure-remodeling complex protein BSH isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009356 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.1e-130
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of MS008199 vs. ExPASy TrEMBL
Match: A0A0A0L868 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171220 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.8e-126
Identity = 230/240 (95.83%), Postives = 235/240 (97.92%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVP SK GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of MS008199 vs. ExPASy TrEMBL
Match: A0A5A7UEL5 (Chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00140 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.2e-125
Identity = 228/240 (95.00%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVP SK GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR 240

[Close]

BLAST of MS008199 vs. ExPASy TrEMBL
Match: A0A1S3AXP6 (chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483932 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.2e-125
Identity = 228/240 (95.00%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGI+DPEVGPA+AVAIREQLYEIA+QNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVP SK GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR 240

[Close]

BLAST of MS008199 vs. ExPASy TrEMBL
Match: A0A6J1FBE7 (chromatin structure-remodeling complex protein BSH OS=Cucurbita moschata OX=3662 GN=LOC111442510 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.3e-122
Identity = 223/240 (92.92%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK+SASA+SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNTLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRT CKDLGIEDPEVGPA+AVAIREQLYEIAMQNVASARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAMQNVASARESRLSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHV ASK GGASVDL+KLFG RSS VRKRKDWD+YEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240

[Close]

BLAST of MS008199 vs. TAIR 10
Match: AT3G17590.1 (transcription regulatory protein SNF5, putative (BSH) )

HSP 1 Score: 388.3 bits (996), Expect = 4.6e-108
Identity = 192/240 (80.00%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RTLCKDLG+EDPEVGPAVA AIREQLYEIA+Q+VASARESR+SKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERTAR 240
            +H  ASK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Sbjct: 181 SDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR 240

[Close]

BLAST of MS008199 vs. TAIR 10
Match: AT3G17590.2 (transcription regulatory protein SNF5, putative (BSH) )

HSP 1 Score: 384.4 bits (986), Expect = 6.6e-107
Identity = 193/242 (79.75%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MKASASAHSKTPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKR 60
           MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKR
Sbjct: 1   MKGLVSTGWKGPVKFRIYRPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKR 60

Query: 61  TVKDLKLPPAFMTQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLW 120
           TVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLW
Sbjct: 61  TVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLW 120

Query: 121 DLNNYESDPEEFSRTLCKDLGIEDPEVGPAVAVAIREQLYEIAMQNVASARESRMSKKGR 180
           DLNN+ESDPEEF+RTLCKDLG+EDPEVGPAVA AIREQLYEIA+Q+VASARESR+SKKGR
Sbjct: 121 DLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGR 180

Query: 181 RGFEHVPASKVGGASVDLVKLFGQRSSVVRKRKDWDMYEPIVDLLSNEEVDALEAKEERT 240
           RG +H  ASK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER 
Sbjct: 181 RGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERH 240

The following BLAST results are available for this feature:

BLAST of MS008199 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138105.1	2.3e-130	100.00	chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charant...	[more]
XP_004147636.1	7.8e-126	95.83	chromatin structure-remodeling complex protein BSH [Cucumis sativus] >KGN57214.1...	[more]
XP_038898737.1	3.9e-125	95.00	chromatin structure-remodeling complex protein BSH [Benincasa hispida]	[more]
XP_008439008.1	6.6e-125	95.00	PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi...	[more]
XP_022935705.1	6.8e-122	92.92	chromatin structure-remodeling complex protein BSH [Cucurbita moschata] >KAG6597...	[more]

BLAST of MS008199 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93045	6.4e-107	80.00	Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana OX=37...	[more]
Q6DFM1	1.0e-19	40.29	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
Q5U379	1.3e-19	40.58	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
Q6GQ82	1.3e-19	40.58	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
O42467	3.9e-19	39.57	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of MS008199 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8H9	1.1e-130	100.00	chromatin structure-remodeling complex protein BSH isoform X1 OS=Momordica chara...	[more]
A0A0A0L868	3.8e-126	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171220 PE=3 SV=1	[more]
A0A5A7UEL5	3.2e-125	95.00	Chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo va...	[more]
A0A1S3AXP6	3.2e-125	95.00	chromatin structure-remodeling complex protein BSH isoform X1 OS=Cucumis melo OX...	[more]
A0A6J1FBE7	3.3e-122	92.92	chromatin structure-remodeling complex protein BSH OS=Cucurbita moschata OX=3662...	[more]

BLAST of MS008199 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17590.1	4.6e-108	80.00	transcription regulatory protein SNF5, putative (BSH)	[more]
AT3G17590.2	6.6e-107	79.75	transcription regulatory protein SNF5, putative (BSH)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006939	SNF5/SMARCB1/INI1	PFAM	PF04855	SNF5	coord: 20..87 e-value: 2.2E-18 score: 66.9 coord: 100..240 e-value: 6.5E-17 score: 62.1
None	No IPR available	PANTHER	PTHR10019:SF5	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1	coord: 5..240
None	No IPR available	PANTHER	PTHR10019	SNF5	coord: 5..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008199.1	MS008199.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000228	nuclear chromosome