MS008132 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACAGTCGAAGAAGCGAAGATCATTTCGAAAACTTTGGGAAACTTAGATTTGAATCAGAAATTCATTTCCAAGCCTACTACTTCTGATCCCTTCGCTAAATCTCCATTTCTCGATTCGAATCAGAAATCCAGTTTGAAGCATACTTCTTTATCCTCCGGTAAATCCCTATTTCTCTTTCTCGTTTTGTTGAAGTTGAGCGTCAAATTGCAACTTGAGGAAATTATTGGGTTTTCTTTTTTCCAATCCAAACTCATTGCTTTTTCTTAGTTTTGACTGGAATTGATTGGTTCTGAAGGTTTGAAGAAATTTGAGGTTCTTGTTTGTTTTTGGTTACAGGATTACCCTTTGAGAGGAAGAAAACTCCAAGTTTAGTCAGTTTATGCGTTGGAGTTATTGGCAAGAATTTGGAAGATATAATTCCTGATTTGGATGAGATTAGTGCCAACTTTCCGTCAGATGTGAAGGTTGTTTTGGTTTAGAATTTGTTCTTTATGTTGGAATATGGCTAATTAATCACCTGAATCGAATTAATTGAGCCTGTTTTGTTGATTTGGTCGTTTTCGTCTTGCATTCTTGAAAGTAATTGGATTGTGGCGTAGAAGATTTTAGCTCATAAACATGCCTTATTTGCGTTCTGCTGGAAAATTGGATGAACCCTGTGATCAATTAGCTCATATTTTATGAAGACCAAGTATGGTTAAATTATATCTTTCATTTATACATTTCCATGTTGATATTAGTTTCATATTTGTTCCATTTCGTGTCTCTACTTTAATTTATTAATCTCAATAGTCTATGTTGCTAATGAATGAGTTGGGCGTTAAACGACCGGACTATTGGGATGTATAAATTAAACTACTGGGATGGAATTGAGACTTTTAAATGTACAATAGGGACGAAATTGACCCTAACGCGCTTTTGTTTTCATTTTTCACGATGAAAAGTTCGATTTCTTGTTTTAAAAAGTTATGATTTAACAAGAATAAGTATTATCATTATCTAGAGCTTTTGTATGATGGAGCACTTCCATTTTCTCTTGTAAGGCTTTTGGGACACTGCAACATAGACTATTGACTGAAAAGCTTATCATGTTATGTATGTTCTCAATTTTCTGTTTTCTGGAATAACAGCAAGCACTAGCAGCAGTTGCCCGAAGAAGGAAATTACTGGACGACGATGTCGTAATCTCCCTGGCGGATTGTTCGTGGGAAACCCTCGATGTCTCTGGTTCAGAAGTTTCTGATTTTGGGTTGGCAAAAGTTGCCCAGAAATGCAAATTTCTCAGAGCTGTGGATATAAGGTGTGCAGGACACAAGTTCCATTGATGAATGAGTTTCTATTGTTATTTTGACTTATGTTGTTCAATAGCATTATTGAAGTTTTTTTTTACTTTCTCACTATGTTATGATCTAGCAAGCTCTCTCTTGTAGTTGCAATTTCAGCCTTTGTTCTGTTTTGAGTATCTTTTGATTAAGAAGAGTTTTAATGCAGCCGATGCAACAAGATCACGGCTGTTGGCATTTCTGAACTCGTCCAGCATTGTTGCTCCTTGGAGACTCTGCGTTGCGGGTACTCGCCTACTTCCCTCCATTGATACACTTTTGAAATACATATTAGGGGACATTTTACATTCATTCTATATGATAGTTGTGAGAATATGTAACTTGTAAGTAGTTTACTGCCAAGAAGTTGCAATCACTTGCACTTATCCTTCAAGGAATCTCATGTGCCAAAATTTGAGCAAAGAATGAGTTTTCCAAACTCATCTTGGCGATTGATGCCTTCGTCGATTTTGACTTGCCAAAACTAGGTTTCTATTTGCATAACGATGACACCTGATCGTGTTAATTTGATACATTTGTTGCATCATGCTATCGTTTTGGCTCTGTATATTGTATTTTGACTAGGAGTAGTAACCTCATAACAGGATGTGAACAAAAATGTTGCAGAGGGTGTTCAAGGAGCGACGATACGACACGAAGATGCTTGGACGTATTTAAGCCGAGGCTGGACGATATAGAAGGGGATTCATGGGAGGAACTTGATACAGCTGAGTTTGCCAATGGAGCACAATCTCTTCGGTGGTTGGTCTGGGTAGGGTACCTTCTCTCCCCAAGTTGATGTTTGTTTTCATTATTTTTTCTGCTGCTTCTACATTTTTTAGATAAGAATTTCCATCCTTCCATTGGAGTTATAAAAAGGAAATATTAGATATAAGAGACTAAGATGAGGAAATAGAAAGGCTAACATTCCACTTTCTTGTTTATCGTTTTCTTCCTTTTTTCCTTAATAAAGAAAAACGTAATTGTGTTTGGTAACTGTTTTTTGTGTCTTTTTTTTATAGGAAAAAAACAGAAAAATATTTAGTAACCATTTCTTATATATTGTGCTCTACAATTTTAAATTAAAAAATAGTAAAAGTTTTATATGAAAATTATTTATTCAAAATTTTATGTTATATTTATTATACATCTTGCAAGTAAAAAAGGTGTTTAGAAAAAACTAGAAATGGAAACAAGAAACTTGATTTTGTTGTTTTCAAAATTTCCACACAATTTTGGAAATGTTTCTCAAAAAACGTGAGTAGTTACCAAACACTTGTGTTTTTCAAAATTAAAAATGAAAAACGAAAAACGAAAAACAAGAAACAACAACATTACCAAACGAGCTCGAAGAGACTTTTTTTTTTTATAGTAAAAATTGCTAATTCTATGAATAACTTCAATTAATAATTTCGCCTTGTAACTCCGATACGTCCATTTACTGCACCCAGTTATTCTGTATTCTCAACGTATAATCATTCTTAGACTGGGAATTATATCCATAGATGATGTGATTTGTAGCGGGGAAATGTTAACCTTCGTGCCTGACACTCATATGGTTAAAAGAAAAGGGAATTGAATATTTTCCTTGCACGAAAACATGCCCGAAATGTCGGTTTCGATCACTTGTTGAATCTCTATGTGAAGTCCTTTTCTTATTGTTGTTATATGGTTGTAGCAGTGGGAAAATTTTGCATCCTTCAGACTCCTTACTGATTCTAATCTTTCATGCTTTCTTTTTCACTTCATGCAGCCAAAGATAGATAAAGATTCCTTGGAGATGTTTTCTGCAGAATGCCCACGCATTACAGTAAATCCAAAGCCATCGCCTTTCGGTTTTAGGGGGAGTCGTGTTCCATTGGAAGCATGGCCAAATATTGCATTGGATGATCATGCCATAGTTGATATCGATCCCAAAACATGGGCAGTAGCCAGATCCATATCAAGGGCTCTAGTTTCTCCCCCAAATCCCTCAGAGTTGTCTTTGGCTGAGAAATTCAGACTCGCATTCGTGGAAAGGGACACTCGGTTGGCTCCAAAACGAGCTAAAAATGCGAGGCAACATCAAAGGCGTGCAGAGAGGGAGTGGATGACGACGAGTCCGAGAGCCAAGGCACTGATCTTGGCCTCTCAAGCAAGTAAAAATTTACAGAGTCGCACT ATGGAAACAGTCGAAGAAGCGAAGATCATTTCGAAAACTTTGGGAAACTTAGATTTGAATCAGAAATTCATTTCCAAGCCTACTACTTCTGATCCCTTCGCTAAATCTCCATTTCTCGATTCGAATCAGAAATCCAGTTTGAAGCATACTTCTTTATCCTCCGGTTCTTGTTTGTTTTTGGTTACAGGATTACCCTTTGAGAGGAAGAAAACTCCAAGTTTAGTCAGTTTATGCGTTGGAGTTATTGGCAAGAATTTGGAAGATATAATTCCTGATTTGGATGAGATTAGTGCCAACTTTCCGTCAGATGTGAAGCAAGCACTAGCAGCAGTTGCCCGAAGAAGGAAATTACTGGACGACGATGTCGTAATCTCCCTGGCGGATTGTTCGTGGGAAACCCTCGATGTCTCTGGTTCAGAAGTTTCTGATTTTGGGTTGGCAAAAGTTGCCCAGAAATGCAAATTTCTCAGAGCTGTGGATATAAGCCGATGCAACAAGATCACGGCTGTTGGCATTTCTGAACTCGTCCAGCATTGTTGCTCCTTGGAGACTCTGCGTTGCGGAGGGTGTTCAAGGAGCGACGATACGACACGAAGATGCTTGGACGTATTTAAGCCGAGGCTGGACGATATAGAAGGGGATTCATGGGAGGAACTTGATACAGCTGAGTTTGCCAATGGAGCACAATCTCTTCGGTGGTTGGTCTGGCCAAAGATAGATAAAGATTCCTTGGAGATGTTTTCTGCAGAATGCCCACGCATTACAGTAAATCCAAAGCCATCGCCTTTCGGTTTTAGGGGGAGTCGTGTTCCATTGGAAGCATGGCCAAATATTGCATTGGATGATCATGCCATAGTTGATATCGATCCCAAAACATGGGCAGTAGCCAGATCCATATCAAGGGCTCTAGTTTCTCCCCCAAATCCCTCAGAGTTGTCTTTGGCTGAGAAATTCAGACTCGCATTCGTGGAAAGGGACACTCGGTTGGCTCCAAAACGAGCTAAAAATGCGAGGCAACATCAAAGGCGTGCAGAGAGGGAGTGGATGACGACGAGTCCGAGAGCCAAGGCACTGATCTTGGCCTCTCAAGCAAGTAAAAATTTACAGAGTCGCACT ATGGAAACAGTCGAAGAAGCGAAGATCATTTCGAAAACTTTGGGAAACTTAGATTTGAATCAGAAATTCATTTCCAAGCCTACTACTTCTGATCCCTTCGCTAAATCTCCATTTCTCGATTCGAATCAGAAATCCAGTTTGAAGCATACTTCTTTATCCTCCGGTTCTTGTTTGTTTTTGGTTACAGGATTACCCTTTGAGAGGAAGAAAACTCCAAGTTTAGTCAGTTTATGCGTTGGAGTTATTGGCAAGAATTTGGAAGATATAATTCCTGATTTGGATGAGATTAGTGCCAACTTTCCGTCAGATGTGAAGCAAGCACTAGCAGCAGTTGCCCGAAGAAGGAAATTACTGGACGACGATGTCGTAATCTCCCTGGCGGATTGTTCGTGGGAAACCCTCGATGTCTCTGGTTCAGAAGTTTCTGATTTTGGGTTGGCAAAAGTTGCCCAGAAATGCAAATTTCTCAGAGCTGTGGATATAAGCCGATGCAACAAGATCACGGCTGTTGGCATTTCTGAACTCGTCCAGCATTGTTGCTCCTTGGAGACTCTGCGTTGCGGAGGGTGTTCAAGGAGCGACGATACGACACGAAGATGCTTGGACGTATTTAAGCCGAGGCTGGACGATATAGAAGGGGATTCATGGGAGGAACTTGATACAGCTGAGTTTGCCAATGGAGCACAATCTCTTCGGTGGTTGGTCTGGCCAAAGATAGATAAAGATTCCTTGGAGATGTTTTCTGCAGAATGCCCACGCATTACAGTAAATCCAAAGCCATCGCCTTTCGGTTTTAGGGGGAGTCGTGTTCCATTGGAAGCATGGCCAAATATTGCATTGGATGATCATGCCATAGTTGATATCGATCCCAAAACATGGGCAGTAGCCAGATCCATATCAAGGGCTCTAGTTTCTCCCCCAAATCCCTCAGAGTTGTCTTTGGCTGAGAAATTCAGACTCGCATTCGTGGAAAGGGACACTCGGTTGGCTCCAAAACGAGCTAAAAATGCGAGGCAACATCAAAGGCGTGCAGAGAGGGAGTGGATGACGACGAGTCCGAGAGCCAAGGCACTGATCTTGGCCTCTCAAGCAAGTAAAAATTTACAGAGTCGCACT METVEEAKIISKTLGNLDLNQKFISKPTTSDPFAKSPFLDSNQKSSLKHTSLSSGSCLFLVTGLPFERKKTPSLVSLCVGVIGKNLEDIIPDLDEISANFPSDVKQALAAVARRRKLLDDDVVISLADCSWETLDVSGSEVSDFGLAKVAQKCKFLRAVDISRCNKITAVGISELVQHCCSLETLRCGGCSRSDDTTRRCLDVFKPRLDDIEGDSWEELDTAEFANGAQSLRWLVWPKIDKDSLEMFSAECPRITVNPKPSPFGFRGSRVPLEAWPNIALDDHAIVDIDPKTWAVARSISRALVSPPNPSELSLAEKFRLAFVERDTRLAPKRAKNARQHQRRAEREWMTTSPRAKALILASQASKNLQSRT Homology
BLAST of MS008132 vs. NCBI nr
Match: XP_022139527.1 (uncharacterized protein LOC111010421 [Momordica charantia]) HSP 1 Score: 711.1 bits (1834), Expect = 5.1e-201 Identity = 362/372 (97.31%), Postives = 362/372 (97.31%), Query Frame = 0
BLAST of MS008132 vs. NCBI nr
Match: XP_022981521.1 (uncharacterized protein LOC111480610 [Cucurbita maxima]) HSP 1 Score: 605.1 bits (1559), Expect = 4.0e-169 Identity = 306/372 (82.26%), Postives = 328/372 (88.17%), Query Frame = 0
BLAST of MS008132 vs. NCBI nr
Match: XP_038896648.1 (uncharacterized protein LOC120084911 [Benincasa hispida]) HSP 1 Score: 604.7 bits (1558), Expect = 5.2e-169 Identity = 308/372 (82.80%), Postives = 331/372 (88.98%), Query Frame = 0
BLAST of MS008132 vs. NCBI nr
Match: XP_023525892.1 (uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 602.8 bits (1553), Expect = 2.0e-168 Identity = 308/372 (82.80%), Postives = 330/372 (88.71%), Query Frame = 0
BLAST of MS008132 vs. NCBI nr
Match: XP_022941466.1 (uncharacterized protein LOC111446756 [Cucurbita moschata]) HSP 1 Score: 600.5 bits (1547), Expect = 9.8e-168 Identity = 310/373 (83.11%), Postives = 329/373 (88.20%), Query Frame = 0
BLAST of MS008132 vs. ExPASy Swiss-Prot
Match: Q0P4D1 (Protein AMN1 homolog OS=Danio rerio OX=7955 GN=amn1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 1.3e-05 Identity = 38/147 (25.85%), Postives = 57/147 (38.78%), Query Frame = 0
BLAST of MS008132 vs. ExPASy Swiss-Prot
Match: B1H1X1 (F-box/LRR-repeat protein 17 OS=Xenopus laevis OX=8355 GN=fbxl17 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.5e-05 Identity = 50/199 (25.13%), Postives = 86/199 (43.22%), Query Frame = 0
BLAST of MS008132 vs. ExPASy Swiss-Prot
Match: Q58DG6 (F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04 Identity = 28/95 (29.47%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of MS008132 vs. ExPASy Swiss-Prot
Match: Q96IG2 (F-box/LRR-repeat protein 20 OS=Homo sapiens OX=9606 GN=FBXL20 PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04 Identity = 28/95 (29.47%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of MS008132 vs. ExPASy Swiss-Prot
Match: Q9CZV8 (F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3) HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04 Identity = 28/95 (29.47%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of MS008132 vs. ExPASy TrEMBL
Match: A0A6J1CE68 (uncharacterized protein LOC111010421 OS=Momordica charantia OX=3673 GN=LOC111010421 PE=4 SV=1) HSP 1 Score: 711.1 bits (1834), Expect = 2.5e-201 Identity = 362/372 (97.31%), Postives = 362/372 (97.31%), Query Frame = 0
BLAST of MS008132 vs. ExPASy TrEMBL
Match: A0A6J1IWS7 (uncharacterized protein LOC111480610 OS=Cucurbita maxima OX=3661 GN=LOC111480610 PE=4 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 1.9e-169 Identity = 306/372 (82.26%), Postives = 328/372 (88.17%), Query Frame = 0
BLAST of MS008132 vs. ExPASy TrEMBL
Match: A0A6J1FL68 (uncharacterized protein LOC111446756 OS=Cucurbita moschata OX=3662 GN=LOC111446756 PE=4 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 4.7e-168 Identity = 310/373 (83.11%), Postives = 329/373 (88.20%), Query Frame = 0
BLAST of MS008132 vs. ExPASy TrEMBL
Match: A0A1S3BJ08 (uncharacterized protein LOC103490139 OS=Cucumis melo OX=3656 GN=LOC103490139 PE=4 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 7.3e-161 Identity = 295/372 (79.30%), Postives = 320/372 (86.02%), Query Frame = 0
BLAST of MS008132 vs. ExPASy TrEMBL
Match: A0A5D3DI95 (Protein AMN1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001000 PE=4 SV=1) HSP 1 Score: 575.1 bits (1481), Expect = 2.1e-160 Identity = 294/372 (79.03%), Postives = 319/372 (85.75%), Query Frame = 0
BLAST of MS008132 vs. TAIR 10
Match: AT4G26980.1 (RNI-like superfamily protein ) HSP 1 Score: 402.9 bits (1034), Expect = 2.8e-112 Identity = 208/359 (57.94%), Postives = 262/359 (72.98%), Query Frame = 0
BLAST of MS008132 vs. TAIR 10
Match: AT5G27920.1 (F-box family protein ) HSP 1 Score: 46.6 bits (109), Expect = 5.1e-05 Identity = 19/59 (32.20%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of MS008132 vs. TAIR 10
Match: AT5G25350.1 (EIN3-binding F box protein 2 ) HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05 Identity = 22/68 (32.35%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of MS008132 vs. TAIR 10
Match: AT5G67250.1 (SKP1/ASK1-interacting protein 2 ) HSP 1 Score: 44.7 bits (104), Expect = 1.9e-04 Identity = 30/85 (35.29%), Postives = 48/85 (56.47%), Query Frame = 0
BLAST of MS008132 vs. TAIR 10
Match: AT5G23340.1 (RNI-like superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 7.3e-04 Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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