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MS007940 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAAAAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGATATGAGAATGATGGAAATTTTTTTTGTATCGGGAGAGTCGCGGCTGATCTACCTCATGGCTGGATAGATAAATGTTTGGATTTCTGCCATTATCTCATA TTTCAAAAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGATATGAGAATGATGAATTTTTTTTGTATCGGGAGAGTCGCGGCTGATCTACCTCATGGCTGGATAGATAAATGTTTGGATTTCTGCCATTATCTCATA TTTCAAAAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGATATGAGAATGATGAATTTTTTTTGTATCGGGAGAGTCGCGGCTGATCTACCTCATGGCTGGATAGATAAATGTTTGGATTTCTGCCATTATCTCATA FQKRELVYDLFEAATDMRMMNFFCIGRVAADLPHGWIDKCLDFCHYLI Homology
BLAST of MS007940 vs. NCBI nr
Match: YP_009300158.1 (NADH-plastoquinone oxidoreductase subunit 7 [Pelargonium transvaalense] >YP_009300166.1 NADH-plastoquinone oxidoreductase subunit 7 [Pelargonium transvaalense] >AJC00073.1 NADH-plastoquinone oxidoreductase subunit 7 [Pelargonium transvaalense] >AJC00081.1 NADH-plastoquinone oxidoreductase subunit 7 [Pelargonium transvaalense]) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. NCBI nr
Match: QJR53013.1 (NADH-plastoquinone oxidoreductase subunit 7 [Herpetospermum pedunculosum]) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. NCBI nr
Match: YP_009751793.1 (NADH dehydrogenase subunit H [Herpetospermum pedunculosum] >QIT04526.1 NADH dehydrogenase subunit H [Herpetospermum pedunculosum]) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. NCBI nr
Match: AFU94944.1 (NdhH, partial [Putranjiva roxburghii]) HSP 1 Score: 87.4 bits (215), Expect = 3.6e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. NCBI nr
Match: YP_009975439.1 (NADH-plastoquinone oxidoreductase subunit 7 [Drypetes lateriflora] >YP_009975590.1 NADH-plastoquinone oxidoreductase subunit 7 [Sibangea similis] >QNK04780.1 NADH-plastoquinone oxidoreductase subunit 7 [Drypetes lateriflora] >QNK04931.1 NADH-plastoquinone oxidoreductase subunit 7 [Sibangea similis]) HSP 1 Score: 87.4 bits (215), Expect = 3.6e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. ExPASy Swiss-Prot
Match: A7Y3K5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Ipomoea purpurea OX=4121 GN=ndhH PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 6.1e-17 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. ExPASy Swiss-Prot
Match: Q4VZL2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 8.0e-17 Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of MS007940 vs. ExPASy Swiss-Prot
Match: Q09WW2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Morus indica OX=248361 GN=ndhH PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 8.0e-17 Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of MS007940 vs. ExPASy Swiss-Prot
Match: A8SEG2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Ceratophyllum demersum OX=4428 GN=ndhH PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.0e-16 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of MS007940 vs. ExPASy Swiss-Prot
Match: A0A391 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Coffea arabica OX=13443 GN=ndhH PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.0e-16 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of MS007940 vs. ExPASy TrEMBL
Match: A0A1B0PUM8 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Pelargonium transvaalense OX=158603 GN=ndhH PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 7.8e-15 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. ExPASy TrEMBL
Match: A0A6H0ET26 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Herpetospermum pedunculosum OX=386182 GN=ndhH PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. ExPASy TrEMBL
Match: A0A6M4K3L3 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Herpetospermum pedunculosum OX=386182 GN=ndhH PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. ExPASy TrEMBL
Match: A0A7G8QCP6 (NADH-quinone oxidoreductase subunit D OS=Drypetes diopa OX=2763563 GN=ndhH PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. ExPASy TrEMBL
Match: A0A7G8QDC2 (NADH-quinone oxidoreductase subunit D OS=Drypetes lateriflora OX=212297 GN=ndhH PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of MS007940 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H ) HSP 1 Score: 82.4 bits (202), Expect = 1.1e-16 Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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