Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTATCTTATGGATGGACAAGAGAACGTACTCGATGCCATATATGAAGATGATGACTTGGAAAATGACGATGTTGAAATGGCTGATGTGGAAGAAGGAGAGTTCGTCGACGGCAACGTACCACATGATACAGAGAAAAGCAGTCTTACAGATGTCCATGCACCAAGTATAGATCATAAAAGTAAAAACCGTAGACGTCGGGCAAAGAAAAAGAAGAACAAAAGAAAGACTAGCGAGTCAGGTTCAAATGGCACAGATATTAACAGGTTAACTGGAATTTCCTAATCTTGCAAGCACACGTTCCTTACATAATTACCCATATTATTTTTGTGAATCACATAAAATGGATATACTTTAATGGATTTACAAGTAGCAATTAAGAGTTAGGAACTTGTATTCTGGTTGTAATATTATTCTGATTTCTGTTTCTCTCAGGTTTGTGTTAGATACATGCCGGCGTTTGAAAGAGAAAAAATCATACATGGTGTACACTGCTGTAGGTTGTCTGGGAGTCTCTGCATTAAGCGAACTTATCAACGAGGTATTTTGATTTTACTAGAACGTGATAAGAATATCTTTTTGCTTATCGATTAACATCAGTTGTCCAATTGCCCCAAGACGACTTGTTAGTAAGGCCTAAGGGCATGTAGTCTCCGTGTAACACCTACCCAGAGGTTGCATGTTCGAACCTTTGGATGAGCTTAATAAAAAAAAATTCTTATATCTCTCGGGTCAAAGTCTTGGGACGGGCGTGGATGCCCCATTATGGGAAAGCAAAGCTCCAACTTTGGGTTATAAAAAAAACATTAGTTATATAATTTCCTTTCTGTTTTAATTTTGTCCTACTTTATAGTTCTTTCCCCCTATTCATCAAACCAACCTATATGAGTTTTATCAGTCCTTTTCTTTTTGGGTTTTCATTCCTGCCCTAAGTGAGCACAACTCATGAATTACTTTACTTCTGTGCCATATGCCTTTGTTCAGTTCTTATTTCTATCCTCAATACTTTTCCTGAGGTCACGAATGATTCTGCCCTCTTCCTGCTAAAAGGTGAAAGTTTTCGGTTGAACTTAATTTTTGACTGGCCTGCCTAACCATGGCCATCCACTCCAGCAAGTATCATACCACACAGTCACTCTTCATATTTAATCAGTATTATTTACTACCCTTGCAGATTCTGTTGCTGAAGCCATTTTGCTACTTTTAACCTTGTTCTCTGAGCTGTGAACCACCATGACTGGACCACTTCGTCTGTGCTATATAAGATGATGTTATTATCCCAGCATATATATGTTGGTTACGATCTCTGTAAGATTTGTCCTTTACTAAACTTAAGCATTGGTCACTCTTTGGCATCCAATTCCAAAAAATGTGTATTCCACCTGATTATTCTTGTTGACTCCATTGAAATGCAATGAAAGTGAGAAGTTTGAATATATACTTTTAACTGTCATATTCTTGGTATCTAGTACTTAGTCTCATTTGTTGGTCCCAGGGTTTGAAATTTATTGGTTTAGTACTTAGTCTATTCTGAAGCCCCCGCCAGCCCTTTTGAGTTACTAATGACGCTTCCCTAGAGATAGGAAGAATACTTATAAACCAATGGTTGATGTTGCTTGAACTGATATTAGCACTTCTCTTATTTTACTACACAACACCCGTATGATCTGTGTGTGTGTATACAAGTTGACATTTCGGAACTCCAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACTGCAGATGGCCGGCGCTTTCGAACAGGAGGTGGTATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATTATGAAACGAGCGAAGGAATTTGAGGTGTGTAACTAAACTTGTTTGACGTAGTTTTTCACTCGGAAAACTAATAGGCGACTTATTCTTTTATTTGTATCATATGAATGTGCTACGCCTATCCTGGTCGCATAGGAAAATGTTATCAATATTCTTGGAAGACGCTTATTTATTTATTTTTTTATCAAGAAATTTACCTTTCATCAAGAAGAATGAAAGATTACAAAAGGATCAATTTAGGCCAACACCACGGTCTAAAAGGCTGAGAGTTCAGAAAAGGAGCCACTCCAGGCCTTGACCTTACAAAACAAGAAAAATCTCCAATCCAAAAAAATAAGGCCTTGCCAATAATTAAAAAAATCGGCAGAGATACAGCCATTAAACCTAACTGAGGATGAGAACTCTCAACTCCTAAAGATTCTAATATTTATCTCAATGTAGATACTTAATTAAAAAAAAAAAGAAGAAAAAAAAAAGCTCAAAATCCTCCGGTAACAATCCTTGTTACGAGTTACACAAACTCCAAAGGGTCTCCAAAAAAAACATCCCCCATCAAACGAGCGAACTGATAACTCCAAATGATGTGACCTAAATCCAGAGATGTCTTCCTACAAAGAATGAACTAATGCGGCCTCTACAAGAGGAAAGAATGCCTCTAAATCCACAATTTTTAAATTGTTTTGTTTCATAGTCAACTCAAGGCAAAATTTTCATCTTTCCGAATCTTTCATCTTATTCTGAGTGGCCTCAGTTTGCCAGGGAGCTTCTATCTGACAGTTCTCAAATGGCTTATATTATGTTTTCTTCTCTCTTGGATTTTATTGTGTTTTGAAGAGTTATACTTTTAATTGTGTTTTTGAAGTCTTTATTAGTTATTACAAATTTGGTAGTATGACAATCACAGTCACACGTTTTTTGGTTCATAATGATGGGGCAGAAACAATTTAAGCAACCAAATCTCAGGGGGGAAGCAACAGGAACTGAGAAAGAGAACTCTGAAAAGGTTCTTCCTCACATCTTCTCTGATGGATCTTCACGAGATCAACCGGGTATCGCCCAGAGCTTTACTCCAGAGCAAAATCAATCTAAACAACCAAATTCTGAAGAAAATCGATTATCTGTTCACGATAGAATAAGAGTACCAGTATCATATGATGACGACCTCCTTGGAGAGAATCTGAACGTAGATGACACGACT
mRNA sequence
AGGTATCTTATGGATGGACAAGAGAACGTACTCGATGCCATATATGAAGATGATGACTTGGAAAATGACGATGTTGAAATGGCTGATGTGGAAGAAGGAGAGTTCGTCGACGGCAACGTACCACATGATACAGAGAAAAGCAGTCTTACAGATGTCCATGCACCAAGTATAGATCATAAAAGTAAAAACCGTAGACGTCGGGCAAAGAAAAAGAAGAACAAAAGAAAGACTAGCGAGTCAGGTTCAAATGGCACAGATATTAACAGGTTTGTGTTAGATACATGCCGGCGTTTGAAAGAGAAAAAATCATACATGGTGTACACTGCTGTAGGTTGTCTGGGAGTCTCTGCATTAAGCGAACTTATCAACGAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACTGCAGATGGCCGGCGCTTTCGAACAGGAGGTGGTATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATTATGAAACGAGCGAAGGAATTTGAGAAACAATTTAAGCAACCAAATCTCAGGGGGGAAGCAACAGGAACTGAGAAAGAGAACTCTGAAAAGGTTCTTCCTCACATCTTCTCTGATGGATCTTCACGAGATCAACCGGGTATCGCCCAGAGCTTTACTCCAGAGCAAAATCAATCTAAACAACCAAATTCTGAAGAAAATCGATTATCTGTTCACGATAGAATAAGAGTACCAGTATCATATGATGACGACCTCCTTGGAGAGAATCTGAACGTAGATGACACGACT
Coding sequence (CDS)
AGGTATCTTATGGATGGACAAGAGAACGTACTCGATGCCATATATGAAGATGATGACTTGGAAAATGACGATGTTGAAATGGCTGATGTGGAAGAAGGAGAGTTCGTCGACGGCAACGTACCACATGATACAGAGAAAAGCAGTCTTACAGATGTCCATGCACCAAGTATAGATCATAAAAGTAAAAACCGTAGACGTCGGGCAAAGAAAAAGAAGAACAAAAGAAAGACTAGCGAGTCAGGTTCAAATGGCACAGATATTAACAGGTTTGTGTTAGATACATGCCGGCGTTTGAAAGAGAAAAAATCATACATGGTGTACACTGCTGTAGGTTGTCTGGGAGTCTCTGCATTAAGCGAACTTATCAACGAGGTCAATGCAGTTCAGGCTTGTGGAGGTCAGATGACTGCAGATGGCCGGCGCTTTCGAACAGGAGGTGGTATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTATAAAGAGATTATGAAACGAGCGAAGGAATTTGAGAAACAATTTAAGCAACCAAATCTCAGGGGGGAAGCAACAGGAACTGAGAAAGAGAACTCTGAAAAGGTTCTTCCTCACATCTTCTCTGATGGATCTTCACGAGATCAACCGGGTATCGCCCAGAGCTTTACTCCAGAGCAAAATCAATCTAAACAACCAAATTCTGAAGAAAATCGATTATCTGTTCACGATAGAATAAGAGTACCAGTATCATATGATGACGACCTCCTTGGAGAGAATCTGAACGTAGATGACACGACT
Protein sequence
RYLMDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKNRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELINEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGEATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVSYDDDLLGENLNVDDTT
Homology
BLAST of MS007932 vs. NCBI nr
Match:
XP_022153361.1 (uncharacterized protein LOC111020873 [Momordica charantia])
HSP 1 Score: 487.6 bits (1254), Expect = 6.4e-134
Identity = 252/256 (98.44%), Postives = 253/256 (98.83%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTE SSLTDVHAPSIDHKSKN
Sbjct: 1 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN
Sbjct: 61 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
Query: 184 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 243
ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS
Sbjct: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
Query: 244 YDDDLLGENLNVDDTT 260
YDDDLLGENLN +D T
Sbjct: 241 YDDDLLGENLNEEDMT 256
BLAST of MS007932 vs. NCBI nr
Match:
KAG7013367.1 (hypothetical protein SDJN02_23531, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 399.1 bits (1024), Expect = 3.0e-107
Identity = 210/258 (81.40%), Postives = 232/258 (89.92%), Query Frame = 0
Query: 2 YLMDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKS 61
+LMDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+ TEKSSLTDV APSIDHKS
Sbjct: 62 HLMDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKS 121
Query: 62 KNRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSEL 121
KNR+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSEL
Sbjct: 122 KNRKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSEL 181
Query: 122 INEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLR 181
I EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R
Sbjct: 182 IKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIR 241
Query: 182 GEATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVP 241
EAT K +S++VL H+FS+G+S+DQP QS TPEQNQSK+ N EE R SVH+R+RVP
Sbjct: 242 REATEIGKASSQEVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNFEEKRSSVHERLRVP 301
Query: 242 VSYDDDLLGENLNVDDTT 260
VSYDDD+L EN +DT+
Sbjct: 302 VSYDDDILRENPKEEDTS 316
BLAST of MS007932 vs. NCBI nr
Match:
XP_023547831.1 (uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 399.1 bits (1024), Expect = 3.0e-107
Identity = 210/256 (82.03%), Postives = 231/256 (90.23%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+ TEKSSLTDV APSIDH+SKN
Sbjct: 1 MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHRSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61 RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180
Query: 184 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 243
AT K +S++VL H+FS+G+S+DQP QS TPEQNQSK+ NSEE R SVH+R+RVPVS
Sbjct: 181 ATEIGKASSQEVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVS 240
Query: 244 YDDDLLGENLNVDDTT 260
YDDD+L EN +DTT
Sbjct: 241 YDDDILRENPKEEDTT 253
BLAST of MS007932 vs. NCBI nr
Match:
KAG6574787.1 (hypothetical protein SDJN03_25426, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 398.3 bits (1022), Expect = 5.1e-107
Identity = 210/257 (81.71%), Postives = 231/257 (89.88%), Query Frame = 0
Query: 3 LMDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSK 62
LMDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+ TEKSSLTDV APSIDHKSK
Sbjct: 75 LMDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSK 134
Query: 63 NRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELI 122
NR+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 135 NRKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELI 194
Query: 123 NEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRG 182
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R
Sbjct: 195 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRR 254
Query: 183 EATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPV 242
EAT K +S++VL H+FS+G+S+DQP QS TPEQNQSK+ N EE R SVH+R+RVPV
Sbjct: 255 EATEIGKASSQEVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNFEEKRSSVHERLRVPV 314
Query: 243 SYDDDLLGENLNVDDTT 260
SYDDD+L EN +DT+
Sbjct: 315 SYDDDILRENPKEEDTS 328
BLAST of MS007932 vs. NCBI nr
Match:
XP_022959193.1 (uncharacterized protein LOC111460255 [Cucurbita moschata])
HSP 1 Score: 397.9 bits (1021), Expect = 6.7e-107
Identity = 210/256 (82.03%), Postives = 230/256 (89.84%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+ TEKSSLTDV APSIDHKSKN
Sbjct: 1 MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61 RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180
Query: 184 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 243
AT K +S+ VL H+FS+G+S+DQP QS TPEQNQSK+ NSEE R SVH+R+RVPVS
Sbjct: 181 ATEIGKASSQDVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVS 240
Query: 244 YDDDLLGENLNVDDTT 260
YDDD+L EN +DT+
Sbjct: 241 YDDDILRENPKEEDTS 253
BLAST of MS007932 vs. ExPASy TrEMBL
Match:
A0A6J1DKE8 (Phosphorylated adapter RNA export protein OS=Momordica charantia OX=3673 GN=LOC111020873 PE=3 SV=1)
HSP 1 Score: 487.6 bits (1254), Expect = 3.1e-134
Identity = 252/256 (98.44%), Postives = 253/256 (98.83%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTE SSLTDVHAPSIDHKSKN
Sbjct: 1 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTETSSLTDVHAPSIDHKSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN
Sbjct: 61 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 180
Query: 184 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 243
ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS
Sbjct: 181 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 240
Query: 244 YDDDLLGENLNVDDTT 260
YDDDLLGENLN +D T
Sbjct: 241 YDDDLLGENLNEEDMT 256
BLAST of MS007932 vs. ExPASy TrEMBL
Match:
A0A6J1H592 (Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC111460255 PE=3 SV=1)
HSP 1 Score: 397.9 bits (1021), Expect = 3.2e-107
Identity = 210/256 (82.03%), Postives = 230/256 (89.84%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDGQEN+L+AIYE+DDLENDDVEM DVEEGEFV+GN+ TEKSSLTDV APSIDHKSKN
Sbjct: 1 MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNI--STEKSSLTDVQAPSIDHKSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61 RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180
Query: 184 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 243
AT K +S+ VL H+FS+G+S+DQP QS TPEQNQSK+ NSEE R SVH+R+RVPVS
Sbjct: 181 ATEIGKASSQDVL-HLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVS 240
Query: 244 YDDDLLGENLNVDDTT 260
YDDD+L EN +DT+
Sbjct: 241 YDDDILRENPKEEDTS 253
BLAST of MS007932 vs. ExPASy TrEMBL
Match:
A0A0A0KBJ7 (Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G076770 PE=3 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 4.4e-104
Identity = 206/258 (79.84%), Postives = 226/258 (87.60%), Query Frame = 0
Query: 2 YLMDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKS 61
YLMDGQEN+L+AIYEDD LENDDVEMADVEEGEF+D N+ + EKSS TDV APS D +S
Sbjct: 2 YLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNI--NIEKSSFTDVQAPSTDQRS 61
Query: 62 KNRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSEL 121
KNR+ R KKKKNKRK+SE GSNGTDINRFVL+ CR LKEKKSYMVYTAVGCLGVSALSEL
Sbjct: 62 KNRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSEL 121
Query: 122 INEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLR 181
I EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R
Sbjct: 122 IKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVR 181
Query: 182 GEATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVP 241
EAT TEKE+S+KV PH+FS+GSSR+ P QSF+ E NQSK+ NSEE S+HDR+RVP
Sbjct: 182 REATETEKESSQKV-PHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVP 241
Query: 242 VSYDDDLLGENLNVDDTT 260
VSYDDDLL EN +DTT
Sbjct: 242 VSYDDDLLQENPKEEDTT 256
BLAST of MS007932 vs. ExPASy TrEMBL
Match:
A0A6J1KUZ4 (Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC111498940 PE=3 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 5.7e-104
Identity = 206/256 (80.47%), Postives = 226/256 (88.28%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDGQEN+L+AIYE+DDLENDDVEM DVEEGE V+GN+ TEKSSLTDV APSIDH+SKN
Sbjct: 1 MDGQENILEAIYEEDDLENDDVEMVDVEEGELVEGNI--STEKSSLTDVQAPSIDHRSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
R+RR+KKKKNKRKT ESGSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSE I
Sbjct: 61 RKRRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSEFIK 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180
Query: 184 ATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPVS 243
AT K +S++VL H+FS G+S+DQP QS TP QNQSK+ NSEE R SV +R+RVPVS
Sbjct: 181 ATEIGKASSQEVL-HLFSQGASQDQPDSIQSLTPLQNQSKESNSEEKRSSVLERLRVPVS 240
Query: 244 YDDDLLGENLNVDDTT 260
YDDD+L EN +DTT
Sbjct: 241 YDDDILRENPKEEDTT 253
BLAST of MS007932 vs. ExPASy TrEMBL
Match:
A0A5D3DLH5 (Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00350 PE=3 SV=1)
HSP 1 Score: 382.5 bits (981), Expect = 1.4e-102
Identity = 204/257 (79.38%), Postives = 225/257 (87.55%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLENDDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKSKN 63
MDG EN+L+AIYE D+ ENDDVEMADVEEGEF+D N+ + EKSS TDV APS D +SKN
Sbjct: 1 MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANI--NIEKSSFTDVQAPSTDQRSKN 60
Query: 64 RRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSELIN 123
R+RR KKKKNKRK+SE GSNGTDINRFVLD CRRLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61 RKRRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIK 120
Query: 124 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNLRGE 183
EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+R E
Sbjct: 121 EVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRRE 180
Query: 184 ATGTEKENSEKVLPHIFSD-GSSRDQPGIAQSFTPEQNQSKQPNSEENRLSVHDRIRVPV 243
AT TEKE+S+KV PH+FS+ GSSR+ P QSFT E N+SK+ NSEE R S+HDR+RVP+
Sbjct: 181 ATETEKESSQKV-PHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPI 240
Query: 244 SYDDDLLGENLNVDDTT 260
SYDDDLL EN +DTT
Sbjct: 241 SYDDDLLQENPKEEDTT 254
BLAST of MS007932 vs. TAIR 10
Match:
AT3G20430.1 (CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )
HSP 1 Score: 199.5 bits (506), Expect = 3.3e-51
Identity = 117/253 (46.25%), Postives = 159/253 (62.85%), Query Frame = 0
Query: 4 MDGQENVLDAIYEDDDLEN-DDVEMADVEEGEFVDGNVPHDTEKSSLTDVHAPSIDHKS- 63
M+G+E++LDAI E+D EN +DVEM DVEEGE V V HD + + + K
Sbjct: 1 MEGEESLLDAINEEDGFENLEDVEMVDVEEGEIV---VDHDLDSGERQNDDGDGVKDKEA 60
Query: 64 --------KNRRRRAKKKKNKRKTSESGSNGTDINRFVLDTCRRLKEKKSYMVYTAVGCL 123
+ + +KKK K++ ++ FV DTCRRLKEKKSYM+YTAVGCL
Sbjct: 61 ILGEKNGLQQTNKNKRKKKKKKRKGPVMDKPMSVDWFVRDTCRRLKEKKSYMIYTAVGCL 120
Query: 124 GVSALSELINEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEK 183
G++ALS+L+NEV A++ CGGQ+TADG R RT GG+LW+IIK R+P AY+EIMK+ KEFEK
Sbjct: 121 GIAALSDLVNEVVAIETCGGQVTADGTRKRTSGGVLWNIIKARQPEAYREIMKKTKEFEK 180
Query: 184 QFKQPNLRGEATGTEKENSEKVLPHIFSDGSSRDQPGIAQSFTPEQNQSKQPNSEENRLS 243
QF+QPN R ++ + S + S S D+ +++ + + E+ R S
Sbjct: 181 QFRQPNTRPKSGPKRDQGSSS--EGLASGNVSADEALVSEMCVMPVAEQTESKPEKERKS 240
Query: 244 VHDRIRVPVSYDD 247
VH+RIRVPVSYDD
Sbjct: 241 VHERIRVPVSYDD 248
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022153361.1 | 6.4e-134 | 98.44 | uncharacterized protein LOC111020873 [Momordica charantia] | [more] |
KAG7013367.1 | 3.0e-107 | 81.40 | hypothetical protein SDJN02_23531, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023547831.1 | 3.0e-107 | 82.03 | uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo] | [more] |
KAG6574787.1 | 5.1e-107 | 81.71 | hypothetical protein SDJN03_25426, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022959193.1 | 6.7e-107 | 82.03 | uncharacterized protein LOC111460255 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DKE8 | 3.1e-134 | 98.44 | Phosphorylated adapter RNA export protein OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
A0A6J1H592 | 3.2e-107 | 82.03 | Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A0A0KBJ7 | 4.4e-104 | 79.84 | Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G07... | [more] |
A0A6J1KUZ4 | 5.7e-104 | 80.47 | Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A5D3DLH5 | 1.4e-102 | 79.38 | Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695... | [more] |
Match Name | E-value | Identity | Description | |
AT3G20430.1 | 3.3e-51 | 46.25 | CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-bindi... | [more] |