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MS007921 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGGAGGGGCGCAATGAGCGGCAGCCACGGCGGGGGACCGTGCGGCGCGTGCAAGTTTTTGCGGAGGAAGTGCGTCAAAGGGTGTATTTTCGCCCCGTATTTCGACTCGGATCAAGGCGCTGCCCACTTCGCCGCGGTGCACAAGGTGTTCGGAGCCAGCAATGCCTCCAAGCTCCTCCTCCGCATCCCTCCCCCCAAGCGCCTCGACGCTTGTGTTACACTATGCTATGAGGCTGTCGCTAGAGTTCGAGACCCCGTCTATGGCTGCGTCCCTCATATCTTCTCCCTTCAGCAACAGGTTTACTTAATTACCCTCTACTTCTACCCCCATCAACTTAAATTTGTTTGGATTTAATGGTAATTTAACGTAGTATTACGACATTATGTCGTATTATAAATATGAATGAAAAGATTAAATTTACCATTAACCTAGCTAAGTATAATTTGATTTTCTTATGCCATATTTTTAGGGTTTTTGGTTTGGGTGTGGAAATGGATATATATAATTTGTATAATACAATTGTAAATTCCCAGATAATTAATTATCAGTTGGTATTTTGCTTGAAAACCATGGTGACTTGCATTTCTAGAAAATAAATTATTAGGGTTATTTTTTGTTCAAACTTAATTGTGTCCCATTTTCCAATGGAATTTTGTCAAACTATTAGAAAATAGTTCTTCAGAGGAGAGAGAAAGAGGTGGCGGCTGGCTTATATTTGGTGTTGCTTGCCTTACCAAGCAAACAAATTTAGCTGCTCGAGAAATAAATTAAAACTTTAATTTCTAGATTTGACTTTCTTATTTATACATCTTAATTTATTCTTTATAACTATTAAACTTTTTTGTTTATGAGAATTTGCTTAATTTAATTTGTAATTAGAAAAAAAAAGAGAGGCTTGCTTACTAGTTGCTAATCATTTCTTTATTTCTCTCTCCACTTTTTAAAAACAGTTTTTTATGTTAGATTTTAAAAAATTGCTTTAAAAATACCATTTTTAAGAACAAATAAATTTAGTTGTAACAGTCTATTGATTTAATGGTCTAAAAAGTGAGTGATTTTACTTTGCATGGATATGGATTAAACTAATTACTTTATTTAAATTAAGGCAATTTTTTAGTGTGTTTTATTTGCAACCCTTTTCTTGCTTGGTTTCCCTTTTTTTTTTTACCAAAAATATCAATTTTCTTTGTCATTTTATGGTCTAATTTTTCTATGTTTTGTCCCTTGAAGCAATCTCCCTACATAGTACAATTTCACAATTTTGATTATTGTCCAATCTTGGATGAGATATTCATACATATATTCGTACGTTGACACATGTATACATACATGCATGTATACATATTATTAATTTAAATAATATTCGTGTTCGTTACATTTTAAGATAAGTTAAAAAGGAATCTACGGTTAAAGTTTTAAATTTTGTGACTTGCTCTTCTCCTTTATTGATTGTTGTTCGTTTCAAGTCTCTTTTTACTTTTTATATTTATTTATATATATGGCTATTAGATTTAAAATTTTACAAAAATGGTATAAGTTATATCACACATCAGACCATTAAAAGTCACTTTTGTGACATTTTTGAAAAACAATAAATAGTGATTATTTTTATGTCATTTAGTATAATTTCTCTTTCTTTTTAAATATCTTTGTTTATTTACGTTGTAATTTTGAACGGTCTAAAACAAGATGTTGATGCTTGTGGATGTTAGAGGTTCACTCTGGAATTTTTTTTGTGCATATTTTTTCTTTAAAAAGAAAAGTTGTAGAATATGCTCCGGAGCAGAGTTAGAAATTTTATATACATAATTTTTAAATTTTTAAATTTTTAAATTTAATTAGGGGATAAATTTGAGAAAAAATTAAAATCTTAGCTGTTCTCTTTTTTATAGATTTTACATTCCATGATTAGAAGTCTAAATTTATATATATGTCTCACATAACATCCTTGGTAAAGTTTAATTCAGAGTTTAGCAAAAGTATAAATAAAATATTTTTAAAACATGTGATAATTTATTTAGAAATAATCTCCACCTTACACGTTATTGTAAAAAAAAAAAAAAAATCTTAAGATATTTTAATTGCTTTTGAAAAGAGAACGTTGGTTTGAATTCTCGTATGATGGCGGTAATAAACCTTAACCTAACCCTAATTCAGATCAATCTCCATATTGTATTTGCAGGTAGTGAGTTTGCAGGCAGAGCTAGCATACATTCAGGCCAGACTTTCCACCTTGCAGCGGCTGTTGCCACCGCCGCTGCACAGCCCTTCCCCGACCGCTCGCCCCACGTCGCTACCCGAAACGGGATCAGGCTCTGACATGGACTTGCTTTCCAATGTTCCTATGCTCCTTGATCCCCTCCAAATTCAGCCACCTAATTATGACGAAACCACGAGCTTTCTAAACCCAATTGATCAAGAGCTCGACGAAGATGGCGATCTTCAGTCATTGGCTCGAGAATTCGTGTCGAGGTACTTGCCCGGAGTAAGATTCCGGCCGCCGTGCTCTCAGAGT AGAAGGAGGGGCGCAATGAGCGGCAGCCACGGCGGGGGACCGTGCGGCGCGTGCAAGTTTTTGCGGAGGAAGTGCGTCAAAGGGTGTATTTTCGCCCCGTATTTCGACTCGGATCAAGGCGCTGCCCACTTCGCCGCGGTGCACAAGGTGTTCGGAGCCAGCAATGCCTCCAAGCTCCTCCTCCGCATCCCTCCCCCCAAGCGCCTCGACGCTTGTGTTACACTATGCTATGAGGCTGTCGCTAGAGTTCGAGACCCCGTCTATGGCTGCGTCCCTCATATCTTCTCCCTTCAGCAACAGGTAGTGAGTTTGCAGGCAGAGCTAGCATACATTCAGGCCAGACTTTCCACCTTGCAGCGGCTGTTGCCACCGCCGCTGCACAGCCCTTCCCCGACCGCTCGCCCCACGTCGCTACCCGAAACGGGATCAGGCTCTGACATGGACTTGCTTTCCAATGTTCCTATGCTCCTTGATCCCCTCCAAATTCAGCCACCTAATTATGACGAAACCACGAGCTTTCTAAACCCAATTGATCAAGAGCTCGACGAAGATGGCGATCTTCAGTCATTGGCTCGAGAATTCGTGTCGAGGTACTTGCCCGGAGTAAGATTCCGGCCGCCGTGCTCTCAGAGT AGAAGGAGGGGCGCAATGAGCGGCAGCCACGGCGGGGGACCGTGCGGCGCGTGCAAGTTTTTGCGGAGGAAGTGCGTCAAAGGGTGTATTTTCGCCCCGTATTTCGACTCGGATCAAGGCGCTGCCCACTTCGCCGCGGTGCACAAGGTGTTCGGAGCCAGCAATGCCTCCAAGCTCCTCCTCCGCATCCCTCCCCCCAAGCGCCTCGACGCTTGTGTTACACTATGCTATGAGGCTGTCGCTAGAGTTCGAGACCCCGTCTATGGCTGCGTCCCTCATATCTTCTCCCTTCAGCAACAGGTAGTGAGTTTGCAGGCAGAGCTAGCATACATTCAGGCCAGACTTTCCACCTTGCAGCGGCTGTTGCCACCGCCGCTGCACAGCCCTTCCCCGACCGCTCGCCCCACGTCGCTACCCGAAACGGGATCAGGCTCTGACATGGACTTGCTTTCCAATGTTCCTATGCTCCTTGATCCCCTCCAAATTCAGCCACCTAATTATGACGAAACCACGAGCTTTCTAAACCCAATTGATCAAGAGCTCGACGAAGATGGCGATCTTCAGTCATTGGCTCGAGAATTCGTGTCGAGGTACTTGCCCGGAGTAAGATTCCGGCCGCCGTGCTCTCAGAGT RRRGAMSGSHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLLRIPPPKRLDACVTLCYEAVARVRDPVYGCVPHIFSLQQQVVSLQAELAYIQARLSTLQRLLPPPLHSPSPTARPTSLPETGSGSDMDLLSNVPMLLDPLQIQPPNYDETTSFLNPIDQELDEDGDLQSLAREFVSRYLPGVRFRPPCSQS Homology
BLAST of MS007921 vs. NCBI nr
Match: XP_022152812.1 (LOB domain-containing protein 19-like [Momordica charantia]) HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110 Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of MS007921 vs. NCBI nr
Match: XP_023006103.1 (LOB domain-containing protein 19-like [Cucurbita maxima]) HSP 1 Score: 341.3 bits (874), Expect = 6.1e-90 Identity = 173/206 (83.98%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of MS007921 vs. NCBI nr
Match: XP_023548961.1 (LOB domain-containing protein 19-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 340.9 bits (873), Expect = 7.9e-90 Identity = 174/206 (84.47%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of MS007921 vs. NCBI nr
Match: KAG6574793.1 (LOB domain-containing protein 31, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 334.3 bits (856), Expect = 7.4e-88 Identity = 169/206 (82.04%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of MS007921 vs. NCBI nr
Match: KAG7013373.1 (LOB domain-containing protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 333.2 bits (853), Expect = 1.7e-87 Identity = 168/206 (81.55%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of MS007921 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53 Identity = 116/202 (57.43%), Postives = 138/202 (68.32%), Query Frame = 0
BLAST of MS007921 vs. ExPASy Swiss-Prot
Match: O81322 (LOB domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=LBD31 PE=2 SV=2) HSP 1 Score: 209.1 bits (531), Expect = 4.7e-53 Identity = 117/216 (54.17%), Postives = 147/216 (68.06%), Query Frame = 0
BLAST of MS007921 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 6.0e-48 Identity = 102/170 (60.00%), Postives = 124/170 (72.94%), Query Frame = 0
BLAST of MS007921 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.0e-47 Identity = 112/198 (56.57%), Postives = 132/198 (66.67%), Query Frame = 0
BLAST of MS007921 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37 Identity = 72/102 (70.59%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of MS007921 vs. ExPASy TrEMBL
Match: A0A6J1DHA3 (LOB domain-containing protein 19-like OS=Momordica charantia OX=3673 GN=LOC111020435 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.1e-111 Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of MS007921 vs. ExPASy TrEMBL
Match: A0A6J1L404 (LOB domain-containing protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111498947 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90 Identity = 173/206 (83.98%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of MS007921 vs. ExPASy TrEMBL
Match: A0A0A0KCW1 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076850 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 4.0e-87 Identity = 167/204 (81.86%), Postives = 176/204 (86.27%), Query Frame = 0
BLAST of MS007921 vs. ExPASy TrEMBL
Match: A0A5D3DLN9 (LOB domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00400 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 5.2e-87 Identity = 167/203 (82.27%), Postives = 176/203 (86.70%), Query Frame = 0
BLAST of MS007921 vs. ExPASy TrEMBL
Match: A0A1S3CBD6 (LOB domain-containing protein 19 OS=Cucumis melo OX=3656 GN=LOC103499031 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 5.2e-87 Identity = 167/203 (82.27%), Postives = 176/203 (86.70%), Query Frame = 0
BLAST of MS007921 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 ) HSP 1 Score: 210.3 bits (534), Expect = 1.5e-54 Identity = 116/202 (57.43%), Postives = 138/202 (68.32%), Query Frame = 0
BLAST of MS007921 vs. TAIR 10
Match: AT4G00210.1 (LOB domain-containing protein 31 ) HSP 1 Score: 209.1 bits (531), Expect = 3.3e-54 Identity = 117/216 (54.17%), Postives = 147/216 (68.06%), Query Frame = 0
BLAST of MS007921 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 ) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49 Identity = 102/170 (60.00%), Postives = 124/170 (72.94%), Query Frame = 0
BLAST of MS007921 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 191.4 bits (485), Expect = 7.2e-49 Identity = 112/198 (56.57%), Postives = 132/198 (66.67%), Query Frame = 0
BLAST of MS007921 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 ) HSP 1 Score: 155.6 bits (392), Expect = 4.4e-38 Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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