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MS007912 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAGCGAAGGGGAGGAGCAGAAGGAAAGGACTCGTTTCTCCCAAGCGACTACATGGGTGGTTTCCCTGGATTTGGTTTATTTGGATCCAATAGAAGTATGATGTCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCCTTTTTCACTCGCCCATTTGTTAGCATGTTGAATTCGGGCTTATCTGGTTCCCGTGCCACTGCGTATGATAATCAAAAGAAAGATGGGGGAAAGGGACTTGTGATTCAAGAAATTTCCTCTGATGAGGAGAGGGAGGAAGATGATGGCCTTATGGGTCAGAGACAGGACAAGAATCAGATGAATTCTGGGTCAGGCAAGGCGCCATCCGTTGAGCATCCGGATGATACCAGTGATGGTAATTGAGCTATGATTTTGATGTTCTTTATTTCTCTTGGTTTCTATGTGACCTTGTTATTCTAATTTCTCTTTACTTCGTTTATCTCGTTGGTTGATGTTCTAGAGCGCCAGATCGTGACTCATAGAAGTAGTGAAGATAGCAGTTTTGGAGTTCAGCCAAAGGCTAGTAAATCCAGTATGCATACTTGCAAGGTCACTTTTGGTGGTGTAGATGGAGCATATTACACGTCTACTAGAACTAGAACGACAGATAATGAGGGAGTAAGTCAGAGTCTTGTGGAATGGCTGTTTACTTTCTCAATAAATTATTGGGTTTGGTAACAGGTTCTTGTGAATCAGGTGTTGCTTGAAGAGACGAAAGAAGTGGATAAGACGACGGGCCAGGCCATTCATAGGATCTCTAGAGGAATTCATGATAAGGTATAGATTGAAGATGAAACTCTGACACATTAAGGACCATATAATTGCTTGACATCACTATATCTCTAGAGCTCGTTTGGTAACGTTTCTTGTTTATGTTTCTTTATTTTTAATGAAGAAAAATGTATTGCATGGTTCCAACCTCTAAGAATTCAAGTATGATAAAACAATCTTTTTATTTATGTTTTGGAACAAATTGGAAATGGAAACAAGAAAGGAGAAACTAGTTTTGGTTGTTTCCAAAATTTCAATACAATTGTGAGAATGTTCCCAAAAAAATGAGAAACAAGAATCAAAGTTAGTTGAAAAATACTTAGTTTCTTAACAAAATTGGGAACGAGAAATAAGAAACGAGAATGTTACCAAACGAGCCTTATGTGTCTTGACCTTAATCATATTTGAGTTGGCATTGAATCCATGGAAATCTGGAAAATTCTGAAAATGTGCTCTTAAAATCGTTTTGGGTGCTTGTTGGTATTGTTAAATCATGTAGCTTATATGATCAACTGTTGGAAATGGAAGACTTGTTTCTTTTCTGAGAGTGTGATATTATTCTCAGCACTGAAGAGATCCCATTGGTGGAGTTTTGTAAATATGTCATTTAAACTTATATTCATCGTGTGAGAACAATTTCTTACTATGTTTGTAATCTTTTAATGAGAACGTTGTGTTGCAAGCTTCATTGTTGGTGTAATTTTCCGATATTCGTTTTGTAACCTCTTTTTTTTTTTGGAATAAAGTTTATAACCTTTCTTGCTGGAGATAATTCTGGGAAATAGAAAAGTGGAATCTAAAACAATTGAATTGCTTGTGCAGGGTCATTCAGTTACTAGGAAACTGAACTCAGATGGTAAAGTGGACACGCTGCAGACTCTGCACAATCTGAATGAAGGTCTTCTCTGTCTTCTCTGTCTGTTTTAATCATGATTTCCATATCGGTACTTCGTTTTCTTTATGTACAAGCAATAACATGGTGTCGCAATATTTTTCTACAGAAGAGCTTGCTGGTTTTGACCGAGCATGGAAAGGTAATTTTCAAGGGCATAAACATGTTCCAAGAGGTGGATTTCATACTGATGGCAATGCAGGTAATTTGGTTCTTTGCTTTTTAAATGTCATTTTTTGTTTCATTCACTCTAACCCCCTGGTGAACATCATCGTTTCCATTGCCTTATAAAAGAAACACCATTTTCTTAATAAGTTTTCCCATGATATCTTATGGCGTCGTTCGGTTTGACTTTTGAGTATGTGTGTGTTTTTTTTCTGGTTCAACAACATGTGGGTGTATAGGGTTTTTAGGCAACAAATATCCCACTTGTGAAAGGTGTTCCAAGTGCTATAAAGTGGCTGATGACTTTGAGTCTTAATTCATCTCAATTAGAAACACTTCAAACTTAGTCTACTGATTTAGTTGTGTGAGTGGTATAAAGCTTTGAGAGTTTTTTTTTTTTTCTTTTTTTTTTTTGTAATTGGGGTCGAGGAAATAATTTTATGTTATTGTAATAACTTTAACATAGTGAATTTTCTTTTTGTTAAGTTAAAACGACTGGAGTTTTTTCATGTAAATTCTTGTATTTCTTTAACGTTGTTATTTTTCTTTCTACAGTTATCTTATGTTTGTTCCTACTATAGAAATAGGGGTTTTTTCCCTTTAGGATCGAACCTTGGATTTTTGGTCAATGATATATGTCATTTGAACTATGTTTAGGTTGCCTTTTGAATAAGTTATTGAAATGAAAAATTATTTCATGGATGATACGAAATTACAGAGGAGGGATCAAAGCCCCGAACCAAAACTAGTGCATCCCATTAGCCATTACATCTTTGAAAAGCATATACATTTTGCTGTGTATCTTTTTCCACACTTTGTATACAAAATATTTTCATGGAACTTCATCTGCACTTTGGTCTCAGCCATCTAACTGTGACAATATCAACAATGCAGAATCTAAGGGCAGTAGAAACAGAGAGATGAGCAGTTGGGATTTTCCATCTTTTGGTGGAAGTAGACATGAACATGATGGTTCAAGACATATCTCTGGTGCTGGTACAACCAAAAAAGTAGTGAGGATCAACATAGAT ATCAAGCGAAGGGGAGGAGCAGAAGGAAAGGACTCGTTTCTCCCAAGCGACTACATGGGTGGTTTCCCTGGATTTGGTTTATTTGGATCCAATAGAAGTATGATGTCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCCTTTTTCACTCGCCCATTTGTTAGCATGTTGAATTCGGGCTTATCTGGTTCCCGTGCCACTGCGTATGATAATCAAAAGAAAGATGGGGGAAAGGGACTTGTGATTCAAGAAATTTCCTCTGATGAGGAGAGGGAGGAAGATGATGGCCTTATGGGTCAGAGACAGGACAAGAATCAGATGAATTCTGGGTCAGGCAAGGCGCCATCCGTTGAGCATCCGGATGATACCAGTGATGAGCGCCAGATCGTGACTCATAGAAGTAGTGAAGATAGCAGTTTTGGAGTTCAGCCAAAGGCTAGTAAATCCAGTATGCATACTTGCAAGGTCACTTTTGGTGGTGTAGATGGAGCATATTACACGTCTACTAGAACTAGAACGACAGATAATGAGGGAGTGTTGCTTGAAGAGACGAAAGAAGTGGATAAGACGACGGGCCAGGCCATTCATAGGATCTCTAGAGGAATTCATGATAAGGGTCATTCAGTTACTAGGAAACTGAACTCAGATGGTAAAGTGGACACGCTGCAGACTCTGCACAATCTGAATGAAGAAGAGCTTGCTGGTTTTGACCGAGCATGGAAAGGTAATTTTCAAGGGCATAAACATGTTCCAAGAGGTGGATTTCATACTGATGGCAATGCAGAATCTAAGGGCAGTAGAAACAGAGAGATGAGCAGTTGGGATTTTCCATCTTTTGGTGGAAGTAGACATGAACATGATGGTTCAAGACATATCTCTGGTGCTGGTACAACCAAAAAAGTAGTGAGGATCAACATAGAT ATCAAGCGAAGGGGAGGAGCAGAAGGAAAGGACTCGTTTCTCCCAAGCGACTACATGGGTGGTTTCCCTGGATTTGGTTTATTTGGATCCAATAGAAGTATGATGTCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCCTTTTTCACTCGCCCATTTGTTAGCATGTTGAATTCGGGCTTATCTGGTTCCCGTGCCACTGCGTATGATAATCAAAAGAAAGATGGGGGAAAGGGACTTGTGATTCAAGAAATTTCCTCTGATGAGGAGAGGGAGGAAGATGATGGCCTTATGGGTCAGAGACAGGACAAGAATCAGATGAATTCTGGGTCAGGCAAGGCGCCATCCGTTGAGCATCCGGATGATACCAGTGATGAGCGCCAGATCGTGACTCATAGAAGTAGTGAAGATAGCAGTTTTGGAGTTCAGCCAAAGGCTAGTAAATCCAGTATGCATACTTGCAAGGTCACTTTTGGTGGTGTAGATGGAGCATATTACACGTCTACTAGAACTAGAACGACAGATAATGAGGGAGTGTTGCTTGAAGAGACGAAAGAAGTGGATAAGACGACGGGCCAGGCCATTCATAGGATCTCTAGAGGAATTCATGATAAGGGTCATTCAGTTACTAGGAAACTGAACTCAGATGGTAAAGTGGACACGCTGCAGACTCTGCACAATCTGAATGAAGAAGAGCTTGCTGGTTTTGACCGAGCATGGAAAGGTAATTTTCAAGGGCATAAACATGTTCCAAGAGGTGGATTTCATACTGATGGCAATGCAGAATCTAAGGGCAGTAGAAACAGAGAGATGAGCAGTTGGGATTTTCCATCTTTTGGTGGAAGTAGACATGAACATGATGGTTCAAGACATATCTCTGGTGCTGGTACAACCAAAAAAGTAGTGAGGATCAACATAGAT IKRRGGAEGKDSFLPSDYMGGFPGFGLFGSNRSMMSNLFGERDPFDDPFFTRPFVSMLNSGLSGSRATAYDNQKKDGGKGLVIQEISSDEEREEDDGLMGQRQDKNQMNSGSGKAPSVEHPDDTSDERQIVTHRSSEDSSFGVQPKASKSSMHTCKVTFGGVDGAYYTSTRTRTTDNEGVLLEETKEVDKTTGQAIHRISRGIHDKGHSVTRKLNSDGKVDTLQTLHNLNEEELAGFDRAWKGNFQGHKHVPRGGFHTDGNAESKGSRNREMSSWDFPSFGGSRHEHDGSRHISGAGTTKKVVRINID Homology
BLAST of MS007912 vs. NCBI nr
Match: XP_022151628.1 (uncharacterized protein LOC111019539 [Momordica charantia]) HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-135 Identity = 248/252 (98.41%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of MS007912 vs. NCBI nr
Match: KAG6574795.1 (hypothetical protein SDJN03_25434, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 471.5 bits (1212), Expect = 5.7e-129 Identity = 237/309 (76.70%), Postives = 266/309 (86.08%), Query Frame = 0
BLAST of MS007912 vs. NCBI nr
Match: KAG7013376.1 (hypothetical protein SDJN02_23540 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 468.8 bits (1205), Expect = 3.7e-128 Identity = 236/309 (76.38%), Postives = 265/309 (85.76%), Query Frame = 0
BLAST of MS007912 vs. NCBI nr
Match: XP_022958824.1 (uncharacterized protein LOC111459979 [Cucurbita moschata] >XP_022958825.1 uncharacterized protein LOC111459979 [Cucurbita moschata]) HSP 1 Score: 468.0 bits (1203), Expect = 6.3e-128 Identity = 236/309 (76.38%), Postives = 265/309 (85.76%), Query Frame = 0
BLAST of MS007912 vs. NCBI nr
Match: XP_023547679.1 (uncharacterized protein LOC111806546 [Cucurbita pepo subsp. pepo] >XP_023547681.1 uncharacterized protein LOC111806546 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 467.6 bits (1202), Expect = 8.2e-128 Identity = 236/309 (76.38%), Postives = 263/309 (85.11%), Query Frame = 0
BLAST of MS007912 vs. ExPASy TrEMBL
Match: A0A6J1DCR4 (uncharacterized protein LOC111019539 OS=Momordica charantia OX=3673 GN=LOC111019539 PE=3 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 8.8e-136 Identity = 248/252 (98.41%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of MS007912 vs. ExPASy TrEMBL
Match: A0A6J1H4K0 (uncharacterized protein LOC111459979 OS=Cucurbita moschata OX=3662 GN=LOC111459979 PE=3 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128 Identity = 236/309 (76.38%), Postives = 265/309 (85.76%), Query Frame = 0
BLAST of MS007912 vs. ExPASy TrEMBL
Match: A0A6J1KXU0 (uncharacterized protein LOC111499178 OS=Cucurbita maxima OX=3661 GN=LOC111499178 PE=3 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 5.7e-127 Identity = 234/309 (75.73%), Postives = 262/309 (84.79%), Query Frame = 0
BLAST of MS007912 vs. ExPASy TrEMBL
Match: A0A5A7TD14 (Myeloid leukemia factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00470 PE=3 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 4.1e-117 Identity = 217/309 (70.23%), Postives = 247/309 (79.94%), Query Frame = 0
BLAST of MS007912 vs. ExPASy TrEMBL
Match: A0A1S3CC93 (uncharacterized protein LOC103499022 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499022 PE=3 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 9.2e-117 Identity = 216/309 (69.90%), Postives = 246/309 (79.61%), Query Frame = 0
BLAST of MS007912 vs. TAIR 10
Match: AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 226.1 bits (575), Expect = 3.9e-59 Identity = 146/296 (49.32%), Postives = 183/296 (61.82%), Query Frame = 0
BLAST of MS007912 vs. TAIR 10
Match: AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 160.6 bits (405), Expect = 2.0e-39 Identity = 94/182 (51.65%), Postives = 115/182 (63.19%), Query Frame = 0
BLAST of MS007912 vs. TAIR 10
Match: AT4G22740.1 (glycine-rich protein ) HSP 1 Score: 160.2 bits (404), Expect = 2.6e-39 Identity = 105/280 (37.50%), Postives = 145/280 (51.79%), Query Frame = 0
BLAST of MS007912 vs. TAIR 10
Match: AT4G22740.2 (glycine-rich protein ) HSP 1 Score: 160.2 bits (404), Expect = 2.6e-39 Identity = 105/280 (37.50%), Postives = 145/280 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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