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MS007910 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTAAGGGTATTTCAGCTTCGGCACTGCCGTACAAGAGGACGCCGCCGAGTTGGCTGAAGATCTCCTCTCAGGATGTAGGAATCCCTCAAACTTTTGTAGATATTTGTTTAGAAATCTATGGAGTGGATAATGTATGTGTTGGAATAGTGGATTCATATGAATATCATGGAGTTTTTATAGAGCCACTGAATAATGAGGGAATACTGTAGGCTTGCTGATTAAACGTGGATGCGAGAACATTTGAGATAATTTAAGCAGTTTGCAGTTCAATGTTTTTATGATGATTTCATCTTGTGGCCATGCATTTTTTGAACATCAGAATTCCTTAGATTCTTTTATCTGTGGTTAGAAAGTTAGTTCTTCTTGGGAAAGATTGCGTTTTAAGTTTTAACAGATTGAAAATGAAAATCGTCGCAGTTGATTTTAATGGAATACGGTGATATGTTTATTAGTGTCATCTGAGTGCTTGGTCTGATGATTGTTCTTGTGAATATCTAAGATAACCGAACAAGTTCTTCCATTGTCGATGTCGATTTAACTGTTTGTTAGTCTAAAGGAAGGGAGTCGAGTCTCTGTAATATATGTAGAAATTGATGGCTTTCCTTTGACCATTCAGGTTGCCGAGAACATTTGCAAATTTGCCAAGAAGGGTTTGACACCATCTCAAATTGGTGTTATTCTTCGTGATTCTCACGGGATTGCTCAGGTGAAAAGTGTAACTGGGAGCAAGATTTTGCGAATATTGAAGGCTCATGGTGAGCCCTTTCTACTCCCTTCCAACAAATTTCTTCTGCTTCATACATAGTTCAGGATGATTATGTGATTTTTTTACCATGTTTTGTTTGTTGGCTCAGGGCTAGCTCCTGAAATTCCGGAGGATCTTTACCATCTCATCAAGAAAGCTGTTTCAATCAGAAAGCATTTGGAGAGGAACAGAAAGGACAAAGATTCCAAGTTCAGGTTGATTCTGGTGGAGAGTAGGATCCATCGCCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCCTGTTTGGAAG AGTAAGGGTATTTCAGCTTCGGCACTGCCGTACAAGAGGACGCCGCCGAGTTGGCTGAAGATCTCCTCTCAGGATGTTGCCGAGAACATTTGCAAATTTGCCAAGAAGGGTTTGACACCATCTCAAATTGGTGTTATTCTTCGTGATTCTCACGGGATTGCTCAGGTGAAAAGTGTAACTGGGAGCAAGATTTTGCGAATATTGAAGGCTCATGGGCTAGCTCCTGAAATTCCGGAGGATCTTTACCATCTCATCAAGAAAGCTGTTTCAATCAGAAAGCATTTGGAGAGGAACAGAAAGGACAAAGATTCCAAGTTCAGGTTGATTCTGGTGGAGAGTAGGATCCATCGCCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCCTGTTTGGAAG AGTAAGGGTATTTCAGCTTCGGCACTGCCGTACAAGAGGACGCCGCCGAGTTGGCTGAAGATCTCCTCTCAGGATGTTGCCGAGAACATTTGCAAATTTGCCAAGAAGGGTTTGACACCATCTCAAATTGGTGTTATTCTTCGTGATTCTCACGGGATTGCTCAGGTGAAAAGTGTAACTGGGAGCAAGATTTTGCGAATATTGAAGGCTCATGGGCTAGCTCCTGAAATTCCGGAGGATCTTTACCATCTCATCAAGAAAGCTGTTTCAATCAGAAAGCATTTGGAGAGGAACAGAAAGGACAAAGATTCCAAGTTCAGGTTGATTCTGGTGGAGAGTAGGATCCATCGCCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCCTGTTTGGAAG SKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK Homology
BLAST of MS007910 vs. NCBI nr
Match: XP_022143980.1 (40S ribosomal protein S13-like [Momordica charantia] >XP_022959507.1 40S ribosomal protein S13-like [Cucurbita moschata] >XP_022964010.1 40S ribosomal protein S13-like [Cucurbita moschata] >XP_023000449.1 40S ribosomal protein S13-like [Cucurbita maxima] >XP_023006177.1 40S ribosomal protein S13-like [Cucurbita maxima] >XP_023514341.1 40S ribosomal protein S13-like [Cucurbita pepo subsp. pepo] >XP_023547500.1 40S ribosomal protein S13-like [Cucurbita pepo subsp. pepo] >KAG6574796.1 40S ribosomal protein S13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013377.1 40S ribosomal protein S13 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6593712.1 40S ribosomal protein S13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026051.1 40S ribosomal protein S13 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. NCBI nr
Match: KAA0039994.1 (40S ribosomal protein S13 [Cucumis melo var. makuwa] >TYK24507.1 40S ribosomal protein S13 [Cucumis melo var. makuwa]) HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. NCBI nr
Match: XP_004153746.1 (40S ribosomal protein S13 [Cucumis sativus] >XP_008460113.1 PREDICTED: 40S ribosomal protein S13 [Cucumis melo] >KGN46246.1 hypothetical protein Csa_005737 [Cucumis sativus]) HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. NCBI nr
Match: XP_038906798.1 (40S ribosomal protein S13 [Benincasa hispida]) HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. NCBI nr
Match: PPD87080.1 (hypothetical protein GOBAR_DD15985 [Gossypium barbadense]) HSP 1 Score: 261.5 bits (667), Expect = 3.8e-66 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of MS007910 vs. ExPASy Swiss-Prot
Match: P62302 (40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 5.6e-68 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of MS007910 vs. ExPASy Swiss-Prot
Match: P46298 (40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.0e-65 Identity = 126/132 (95.45%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of MS007910 vs. ExPASy Swiss-Prot
Match: P59224 (40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 5.8e-65 Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of MS007910 vs. ExPASy Swiss-Prot
Match: P59223 (40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 2.2e-64 Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of MS007910 vs. ExPASy Swiss-Prot
Match: Q69UI1 (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117300 PE=1 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.0e-58 Identity = 113/132 (85.61%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of MS007910 vs. ExPASy TrEMBL
Match: A0A6J1KV63 (40S ribosomal protein S13-like OS=Cucurbita maxima OX=3661 GN=LOC111498990 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. ExPASy TrEMBL
Match: A0A6J1HJL3 (40S ribosomal protein S13-like OS=Cucurbita moschata OX=3662 GN=LOC111464161 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. ExPASy TrEMBL
Match: A0A6J1CQC4 (40S ribosomal protein S13-like OS=Momordica charantia OX=3673 GN=LOC111013762 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. ExPASy TrEMBL
Match: A0A5A7T967 (40S ribosomal protein S13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00490 PE=3 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. ExPASy TrEMBL
Match: A0A0A0KEP4 (Ribosomal_S13_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G077430 PE=3 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS007910 vs. TAIR 10
Match: AT4G00100.1 (ribosomal protein S13A ) HSP 1 Score: 248.1 bits (632), Expect = 4.1e-66 Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0
BLAST of MS007910 vs. TAIR 10
Match: AT3G60770.1 (Ribosomal protein S13/S15 ) HSP 1 Score: 246.1 bits (627), Expect = 1.6e-65 Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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