Homology
BLAST of MS007895 vs. NCBI nr
Match:
XP_022155781.1 (RNA polymerase sigma factor sigB [Momordica charantia])
HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 585/586 (99.83%), Postives = 586/586 (100.00%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASPSTSTGTATTFNVERLKLPPLDANTDS+SAERLRSYLSAVESSFASTLLTSEEAT
Sbjct: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSISAERLRSYLSAVESSFASTLLTSEEAT 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELSNIAVRSRRQTERRAKR 240
DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELSNIAVRSRRQTERRAKR
Sbjct: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELSNIAVRSRRQTERRAKR 240
Query: 241 TRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEG 300
TRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEG
Sbjct: 241 TRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEG 300
Query: 301 IQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV 360
IQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV
Sbjct: 301 IQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV 360
Query: 361 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420
ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 361 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420
Query: 421 RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL 480
RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL
Sbjct: 421 RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL 480
Query: 481 EQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMED 540
EQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMED
Sbjct: 481 EQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMED 540
Query: 541 GRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
GRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 GRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 586
BLAST of MS007895 vs. NCBI nr
Match:
XP_038875580.1 (RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida])
HSP 1 Score: 975.7 bits (2521), Expect = 1.8e-280
Identity = 527/588 (89.63%), Postives = 547/588 (93.03%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYS-HHHNFLPTANSSCTKVRDPHSLRTQC 60
MSCLLPQFKCHPETFSIQFK T ANY+ HHH FLPTANSS TKVRDPHSLRTQC
Sbjct: 1 MSCLLPQFKCHPETFSIQFK-------TAANYAPHHHTFLPTANSSYTKVRDPHSLRTQC 60
Query: 61 ILSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEA 120
ILSAASP TSTGTATT NV+RL LPP D NTDSVS ERLRSYL AVESS ASTLLTSEEA
Sbjct: 61 ILSAASPPTSTGTATTLNVDRLMLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEA 120
Query: 121 TIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESER 180
TIAAAAAEAV LAKAAVKVA+DAALL NNSNSS+ G+KS+SS + DALHFKW QFMESER
Sbjct: 121 TIAAAAAEAVALAKAAVKVARDAALLANNSNSSRAGEKSRSSPRPDALHFKWAQFMESER 180
Query: 181 ADIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRA 240
ADIIG PVGVNNRP E DALQ T +SD +PT+EELELLQDELS +I VRS+RQTER+A
Sbjct: 181 ADIIGEPVGVNNRPMETDALQPSTTKSDDMEPTSEELELLQDELSESITVRSKRQTERKA 240
Query: 241 KRTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELS 300
+RTRAAEK ATSVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTA EELELS
Sbjct: 241 RRTRAAEKTATSVVSLKSGSSSRKKRNSLQEVDYSDPLRYLRATTSTSRLLTAAEELELS 300
Query: 301 EGIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIR 360
EGIQDLLKLERLQEEL +RYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIR
Sbjct: 301 EGIQDLLKLERLQEELADRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIR 360
Query: 361 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 420
LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD
Sbjct: 361 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSD 420
Query: 421 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPR 480
QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPR
Sbjct: 421 QSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPR 480
Query: 481 SLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGM 540
SLEQKIGINQNLKPSEVISDPEAET+ED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGM
Sbjct: 481 SLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGM 540
Query: 541 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL+S
Sbjct: 541 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 581
BLAST of MS007895 vs. NCBI nr
Match:
XP_004154029.1 (RNA polymerase sigma factor sigB [Cucumis sativus] >KGN46260.1 hypothetical protein Csa_004860 [Cucumis sativus])
HSP 1 Score: 968.0 bits (2501), Expect = 3.7e-278
Identity = 522/587 (88.93%), Postives = 542/587 (92.33%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFK T ANYSHHH+FLPTA SS TKVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFK-------TAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASP TSTGTATT +V+RLKLPP D NTDSVS ERLRSYL AVESS ASTLLTSEEA+
Sbjct: 61 LSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAS 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAVTLAKAAVKVA+DAALL NN NSS+ G KSQSS K DALHFKW QFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVN RP EGDAL+ T ESD +PT+EELELLQDELS +I V+S+RQTER+A+
Sbjct: 181 DIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKAR 240
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRAAEK TSV+S KSGSSSRKKRNSVQEVDYSDPLRYLRATT+ SRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSE 300
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQKIGINQNLKPSEVISDPEAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580
BLAST of MS007895 vs. NCBI nr
Match:
XP_008460092.1 (PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo])
HSP 1 Score: 965.7 bits (2495), Expect = 1.8e-277
Identity = 521/587 (88.76%), Postives = 541/587 (92.16%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFK T AN SHHH+F+PTA SS TKVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFK-------TAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASP TSTGTATT NV+RLKLPP D NTDSVS ERLRSYL AVESS ASTLLTSEEAT
Sbjct: 61 LSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAT 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAVTLAKAAVKVA+DAALL NN NSS+ G KSQ S K DALHFKW QFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVN RP EGDAL+ T ESD +PT++ELELLQDELS +I V+S+RQTER+A+
Sbjct: 181 DIIGEPVGVNKRPIEGDALEPSTTESDDVEPTSKELELLQDELSESITVKSKRQTERKAR 240
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRAAEK TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQKIGINQNLKPSEVISDPEAET+ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 580
BLAST of MS007895 vs. NCBI nr
Match:
XP_022964550.1 (RNA polymerase sigma factor sigB [Cucurbita moschata])
HSP 1 Score: 955.3 bits (2468), Expect = 2.5e-274
Identity = 513/586 (87.54%), Postives = 542/586 (92.49%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFKT A T+T T SHHH FLPTANS+ K RDPHSLRTQCI
Sbjct: 98 MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCI 157
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASP T TGTATTFNV+RLKLPP D NTDSVSAERLRSYL AVESS ASTLLTSEEAT
Sbjct: 158 LSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 217
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAV LAKAAVK A DAALLVNNSNSS++ KSQSSS+S+ALHFKWDQFMESERA
Sbjct: 218 IAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERA 277
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVNNRP EGDAL+ TAESD +PT+EELELL+DE S +IAVRS RQTER+A+
Sbjct: 278 DIIGEPVGVNNRPVEGDALEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKAR 337
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRA+EK ATSVVS+KSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Sbjct: 338 RTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE 397
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERL+EEL RYG EPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL
Sbjct: 398 GIQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 457
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 458 VISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 517
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRS
Sbjct: 518 SRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRS 577
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQK GINQNLKPSEVISDPEA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GME
Sbjct: 578 LEQKFGINQNLKPSEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGME 637
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 586
DGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Sbjct: 638 DGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM 683
BLAST of MS007895 vs. ExPASy Swiss-Prot
Match:
O22056 (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)
HSP 1 Score: 649.0 bits (1673), Expect = 4.9e-185
Identity = 377/600 (62.83%), Postives = 455/600 (75.83%), Query Frame = 0
Query: 2 SCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSL--RTQC 61
SCLLPQFKC P++FSI F+T S C + S+ + QC
Sbjct: 3 SCLLPQFKCPPDSFSIHFRT----------------------SFCAPKHNKGSVFFQPQC 62
Query: 62 ILSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSY---------LSAVESSFA 121
+S SP+ T + +V +L+LP D ++DS+ ++R +Y +E+ +
Sbjct: 63 AVS-TSPALLT---SMLDVAKLRLPSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALAS 122
Query: 122 STLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFK 181
TLLTS+EA + AAAAEAV LA+AAVKVAKDA L N++N++ +SS +D K
Sbjct: 123 ETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLL-----TSSTADK-RSK 182
Query: 182 WDQFMESERADIIG-VPVGVNNRPAEGDALQHDTAES--DYTDPTTEELELLQDELS-NI 241
WDQF E ERA I+G + V N ++ ES D EE+ELL+++ S ++
Sbjct: 183 WDQFTEKERAGILGHLAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSL 242
Query: 242 AVRSRRQTERRAKRTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNS 301
AVRS RQTER+A+R + EK A+ + SVK+GSS +KKR QEVD++DPLRYLR TTS+S
Sbjct: 243 AVRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSS 302
Query: 302 RLLTATEELELSEGIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGT 361
+LLT EE ELS GIQDLLKLERLQ EL ER G++PTFAQWA+AAGV+Q++LR+R+++GT
Sbjct: 303 KLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGT 362
Query: 362 FCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 421
CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHW
Sbjct: 363 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 422
Query: 422 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKR 481
WIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKR
Sbjct: 423 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKR 482
Query: 482 LAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNP 541
L AVL++PK PRSL+QKIG+NQNLKPSEVI+DPEA TSED+LIK+FM+QDL+KVLDSL
Sbjct: 483 LMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGT 542
Query: 542 RERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Sbjct: 543 REKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVA 570
BLAST of MS007895 vs. ExPASy Swiss-Prot
Match:
P26683 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 7.6e-77
Identity = 154/332 (46.39%), Postives = 225/332 (67.77%), Query Frame = 0
Query: 255 KSGSSSRKKRNSVQEVDY--SDPLRYLRATTSNSRLLTATEELELSEGIQDLLKLERLQE 314
KSG +++ +R + + + D +R RLL A EE+EL+ I DLL+LER++E
Sbjct: 59 KSGKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRE 118
Query: 315 ELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGM 374
L E+ ++P ++WA A + R RL+ G KDKM++SN+RLV+SIAK Y G+
Sbjct: 119 RLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGL 178
Query: 375 NLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEA 434
+ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E
Sbjct: 179 SFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYET 238
Query: 435 TYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKP 494
R+K+ K L E GR P +EEIA +++++L + + + P SLE IG ++ +
Sbjct: 239 ISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRL 298
Query: 495 SEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI 554
+ I + + ET ED + K +++DLEKVLDSL+PRER V+R R+G++DGRMKTL+EIG+I
Sbjct: 299 GDFI-ESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQI 358
Query: 555 MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL 585
V+RERIRQIE+ A RKL++ R L++Y+
Sbjct: 359 FNVTRERIRQIEAKALRKLRHPNRNSVLKEYI 389
BLAST of MS007895 vs. ExPASy Swiss-Prot
Match:
P38023 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA1 PE=3 SV=2)
HSP 1 Score: 280.0 bits (715), Expect = 6.0e-74
Identity = 162/385 (42.08%), Postives = 240/385 (62.34%), Query Frame = 0
Query: 213 TEELELLQDELSNIAVRSRRQTERRAKRTRAAEKIATSVVSV-------------KSGSS 272
T+ ELL L +++R + R K T A + AT++ + +
Sbjct: 17 TQATELLDPALKPAETKAKRSS--RKKATTAVVEPATTIAPTADVDAIDDEDSVGEDEDA 76
Query: 273 SRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEGIQDLLKLERLQEELRERYG 332
+ K + V++ D +R RLL A EE+EL+ I DLL LER+++EL E+
Sbjct: 77 AAKAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQLD 136
Query: 333 KEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 392
+ P+ A+WAAA R+RL G KDKM++SN+RLV+SIAK Y G++ QDL+Q
Sbjct: 137 RLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQ 196
Query: 393 EGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 452
EG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+
Sbjct: 197 EGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKT 256
Query: 453 RKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP 512
K L E GR P +EEIA +++++L + + + P SLE IG ++ + + I +
Sbjct: 257 TKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EA 316
Query: 513 EAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRER 572
+ ET ED + K +++DLE VL +L+PRER V+R R+G++DGRMKTL+EIG++ V+RER
Sbjct: 317 DGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRER 376
Query: 573 IRQIESCAFRKLKNKKRTKHLQQYL 585
IRQIE+ A RKL++ R L++Y+
Sbjct: 377 IRQIEAKALRKLRHPNRNSILKEYI 398
BLAST of MS007895 vs. ExPASy Swiss-Prot
Match:
P52322 (RNA polymerase sigma factor SigA OS=Microcystis aeruginosa OX=1126 GN=sigA PE=3 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 6.5e-68
Identity = 149/366 (40.71%), Postives = 224/366 (61.20%), Query Frame = 0
Query: 259 SSRKKRNSVQEVDYS-DPLRYLRATTSNSRLLTATEELELSEGIQDLLKLERLQEE---- 318
+S ++R++ ++ Y+ D +R RLL A EE+EL+ I DLLKLER++E+
Sbjct: 51 ASARRRDAARKKPYTEDSIRIYLQEIGRIRLLRAEEEIELARKIADLLKLERIREDFCLY 110
Query: 319 ------------------LRERYGKEPTFA-----------------QWAAAAGVNQRTL 378
+ E+ KEP + +W A +
Sbjct: 111 SDAEWGKQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAF 170
Query: 379 RKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF 438
++RL +G K+KM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+
Sbjct: 171 KRRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGY 230
Query: 439 KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAE 498
KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EEIA
Sbjct: 231 KFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIAT 290
Query: 499 AAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLE 558
+++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLE
Sbjct: 291 KMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDLE 350
Query: 559 KVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTK 585
VLD+L+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A RKL++ R
Sbjct: 351 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 410
BLAST of MS007895 vs. ExPASy Swiss-Prot
Match:
P74565 (RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sigA PE=3 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.0e-65
Identity = 145/367 (39.51%), Postives = 218/367 (59.40%), Query Frame = 0
Query: 263 KRNSVQEVDYS-DPLRYLRATTSNSRLLTATEELELSEGIQDLLKLERLQEELRERYGKE 322
++++V++ Y+ D +R RLL A EE+EL+ I DLL+LE +++ L + ++
Sbjct: 59 RKDAVKKKPYTEDSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQ 118
Query: 323 PTFA--------------------------------------------QWAAAAGVNQRT 382
P+ +W+ N
Sbjct: 119 PSELEWGKQVWKLETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAA 178
Query: 383 LRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 442
R+RL KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG
Sbjct: 179 FRRRLFLDRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKG 238
Query: 443 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIA 502
+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L E R P +EEIA
Sbjct: 239 YKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIA 298
Query: 503 EAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDL 562
E +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DL
Sbjct: 299 EKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-EADGETPEDEVSKNLLREDL 358
Query: 563 EKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRT 585
E VLD+L+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A RKL++ R
Sbjct: 359 ENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRN 418
BLAST of MS007895 vs. ExPASy TrEMBL
Match:
A0A6J1DSR7 (RNA polymerase sigma factor OS=Momordica charantia OX=3673 GN=LOC111022820 PE=3 SV=1)
HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 585/586 (99.83%), Postives = 586/586 (100.00%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASPSTSTGTATTFNVERLKLPPLDANTDS+SAERLRSYLSAVESSFASTLLTSEEAT
Sbjct: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSISAERLRSYLSAVESSFASTLLTSEEAT 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELSNIAVRSRRQTERRAKR 240
DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELSNIAVRSRRQTERRAKR
Sbjct: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELSNIAVRSRRQTERRAKR 240
Query: 241 TRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEG 300
TRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEG
Sbjct: 241 TRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSEG 300
Query: 301 IQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV 360
IQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV
Sbjct: 301 IQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLV 360
Query: 361 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420
ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 361 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 420
Query: 421 RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL 480
RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL
Sbjct: 421 RTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSL 480
Query: 481 EQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMED 540
EQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMED
Sbjct: 481 EQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMED 540
Query: 541 GRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
GRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 GRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 586
BLAST of MS007895 vs. ExPASy TrEMBL
Match:
A0A0A0K917 (RNA polymerase sigma factor OS=Cucumis sativus OX=3659 GN=Csa_6G078550 PE=3 SV=1)
HSP 1 Score: 968.0 bits (2501), Expect = 1.8e-278
Identity = 522/587 (88.93%), Postives = 542/587 (92.33%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFK T ANYSHHH+FLPTA SS TKVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFK-------TAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASP TSTGTATT +V+RLKLPP D NTDSVS ERLRSYL AVESS ASTLLTSEEA+
Sbjct: 61 LSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAS 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAVTLAKAAVKVA+DAALL NN NSS+ G KSQSS K DALHFKW QFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVN RP EGDAL+ T ESD +PT+EELELLQDELS +I V+S+RQTER+A+
Sbjct: 181 DIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKAR 240
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRAAEK TSV+S KSGSSSRKKRNSVQEVDYSDPLRYLRATT+ SRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSE 300
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQKIGINQNLKPSEVISDPEAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580
BLAST of MS007895 vs. ExPASy TrEMBL
Match:
A0A1S3CD00 (RNA polymerase sigma factor OS=Cucumis melo OX=3656 GN=LOC103499006 PE=3 SV=1)
HSP 1 Score: 965.7 bits (2495), Expect = 8.8e-278
Identity = 521/587 (88.76%), Postives = 541/587 (92.16%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFK T AN SHHH+F+PTA SS TKVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFK-------TAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASP TSTGTATT NV+RLKLPP D NTDSVS ERLRSYL AVESS ASTLLTSEEAT
Sbjct: 61 LSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVESSLASTLLTSEEAT 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAVTLAKAAVKVA+DAALL NN NSS+ G KSQ S K DALHFKW QFMESERA
Sbjct: 121 IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVN RP EGDAL+ T ESD +PT++ELELLQDELS +I V+S+RQTER+A+
Sbjct: 181 DIIGEPVGVNKRPIEGDALEPSTTESDDVEPTSKELELLQDELSESITVKSKRQTERKAR 240
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRAAEK TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Sbjct: 241 RTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE 300
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRL 360
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQ
Sbjct: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQ 420
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRS 480
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQKIGINQNLKPSEVISDPEAET+ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGME
Sbjct: 481 LEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGME 540
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Sbjct: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 580
BLAST of MS007895 vs. ExPASy TrEMBL
Match:
A0A6J1HL45 (RNA polymerase sigma factor sigB OS=Cucurbita moschata OX=3662 GN=LOC111464542 PE=3 SV=1)
HSP 1 Score: 955.3 bits (2468), Expect = 1.2e-274
Identity = 513/586 (87.54%), Postives = 542/586 (92.49%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFKT A T+T T SHHH FLPTANS+ K RDPHSLRTQCI
Sbjct: 98 MSCLLPQFKCHPETFSIQFKTPASTITPTPTSSHHHTFLPTANSTYFKFRDPHSLRTQCI 157
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAASP T TGTATTFNV+RLKLPP D NTDSVSAERLRSYL AVESS ASTLLTSEEAT
Sbjct: 158 LSAASPPTLTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 217
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAV LAKAAVK A DAALLVNNSNSS++ KSQSSS+S+ALHFKWDQFMESERA
Sbjct: 218 IAAAAAEAVALAKAAVKAANDAALLVNNSNSSRSVTKSQSSSRSNALHFKWDQFMESERA 277
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVNNRP EGDAL+ TAESD +PT+EELELL+DE S +IAVRS RQTER+A+
Sbjct: 278 DIIGEPVGVNNRPVEGDALEPSTAESDDMEPTSEELELLEDEFSKSIAVRSIRQTERKAR 337
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRA+EK ATSVVS+KSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Sbjct: 338 RTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE 397
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERL+EEL RYG EPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL
Sbjct: 398 GIQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 457
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 458 VISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 517
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATY+VKEARKQLY+ NGR P+DEEIA AAGLSMKRLA VLMTPKAPRS
Sbjct: 518 SRTIRLPFHMVEATYKVKEARKQLYTANGRLPNDEEIAVAAGLSMKRLATVLMTPKAPRS 577
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQK GINQNLKPSEVISDPEA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GME
Sbjct: 578 LEQKFGINQNLKPSEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGME 637
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 586
DGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Sbjct: 638 DGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM 683
BLAST of MS007895 vs. ExPASy TrEMBL
Match:
A0A6J1KM29 (RNA polymerase sigma factor OS=Cucurbita maxima OX=3661 GN=LOC111494519 PE=3 SV=1)
HSP 1 Score: 954.1 bits (2465), Expect = 2.7e-274
Identity = 515/586 (87.88%), Postives = 542/586 (92.49%), Query Frame = 0
Query: 1 MSCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSLRTQCI 60
MSCLLPQFKCHPETFSIQFKT AIT+T T SHHH FLPTANS+ KVRDPHSLRTQCI
Sbjct: 1 MSCLLPQFKCHPETFSIQFKTPAITITPTPTSSHHHTFLPTANSTYFKVRDPHSLRTQCI 60
Query: 61 LSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSYLSAVESSFASTLLTSEEAT 120
LSAA TSTGTATTFNV+RLKLPP D NTDSVSAERLRSYL AVESS ASTLLTSEEAT
Sbjct: 61 LSAA---TSTGTATTFNVDRLKLPPFDTNTDSVSAERLRSYLGAVESSLASTLLTSEEAT 120
Query: 121 IAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFKWDQFMESERA 180
IAAAAAEAV LAKAAVK A DAALLVNNSNS+++ KSQSSSKS+ALHFKWDQFMESERA
Sbjct: 121 IAAAAAEAVALAKAAVKAANDAALLVNNSNSARSVTKSQSSSKSNALHFKWDQFMESERA 180
Query: 181 DIIGVPVGVNNRPAEGDALQHDTAESDYTDPTTEELELLQDELS-NIAVRSRRQTERRAK 240
DIIG PVGVNNRP EGDAL+ TAESD +PT+EELELLQDE S +IAVRS RQTER+A+
Sbjct: 181 DIIGEPVGVNNRPVEGDALEPSTAESDDMEPTSEELELLQDEFSKSIAVRSNRQTERKAR 240
Query: 241 RTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTATEELELSE 300
RTRA+EK ATSVVS+KSGSSSRKKRNS QEVDY+DPLRYLRATTS S+LLTA++ELELSE
Sbjct: 241 RTRASEKAATSVVSLKSGSSSRKKRNSGQEVDYNDPLRYLRATTSASKLLTASDELELSE 300
Query: 301 GIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
GIQDLLKLERL+EEL RYG EPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL
Sbjct: 301 GIQDLLKLERLKEELAGRYGNEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRL 360
Query: 361 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
VISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 361 VISIAKNYQGGGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 420
Query: 421 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRS 480
SRTIRLPFHMVEATY+VKEARKQLY+ NGR P DEEIA AAGLSMKRLA VLMTPKAPRS
Sbjct: 421 SRTIRLPFHMVEATYKVKEARKQLYTANGRLPADEEIAVAAGLSMKRLATVLMTPKAPRS 480
Query: 481 LEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGME 540
LEQK GINQNLKPSEVISDPEA T+EDLLIKQFMKQ+LEKVLDSLNPRERQ+IRWR+GME
Sbjct: 481 LEQKFGINQNLKPSEVISDPEAVTAEDLLIKQFMKQELEKVLDSLNPRERQIIRWRYGME 540
Query: 541 DGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 586
DGRMKTLQEIGE+MGVSRERIRQIE CAFRKLKNKKRTKHLQQYLM
Sbjct: 541 DGRMKTLQEIGEMMGVSRERIRQIELCAFRKLKNKKRTKHLQQYLM 583
BLAST of MS007895 vs. TAIR 10
Match:
AT1G08540.1 (RNApolymerase sigma subunit 2 )
HSP 1 Score: 649.0 bits (1673), Expect = 3.5e-186
Identity = 377/600 (62.83%), Postives = 455/600 (75.83%), Query Frame = 0
Query: 2 SCLLPQFKCHPETFSIQFKTTAITVTTTANYSHHHNFLPTANSSCTKVRDPHSL--RTQC 61
SCLLPQFKC P++FSI F+T S C + S+ + QC
Sbjct: 3 SCLLPQFKCPPDSFSIHFRT----------------------SFCAPKHNKGSVFFQPQC 62
Query: 62 ILSAASPSTSTGTATTFNVERLKLPPLDANTDSVSAERLRSY---------LSAVESSFA 121
+S SP+ T + +V +L+LP D ++DS+ ++R +Y +E+ +
Sbjct: 63 AVS-TSPALLT---SMLDVAKLRLPSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALAS 122
Query: 122 STLLTSEEATIAAAAAEAVTLAKAAVKVAKDAALLVNNSNSSKTGKKSQSSSKSDALHFK 181
TLLTS+EA + AAAAEAV LA+AAVKVAKDA L N++N++ +SS +D K
Sbjct: 123 ETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLL-----TSSTADK-RSK 182
Query: 182 WDQFMESERADIIG-VPVGVNNRPAEGDALQHDTAES--DYTDPTTEELELLQDELS-NI 241
WDQF E ERA I+G + V N ++ ES D EE+ELL+++ S ++
Sbjct: 183 WDQFTEKERAGILGHLAVSDNGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSL 242
Query: 242 AVRSRRQTERRAKRTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNS 301
AVRS RQTER+A+R + EK A+ + SVK+GSS +KKR QEVD++DPLRYLR TTS+S
Sbjct: 243 AVRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSS 302
Query: 302 RLLTATEELELSEGIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGT 361
+LLT EE ELS GIQDLLKLERLQ EL ER G++PTFAQWA+AAGV+Q++LR+R+++GT
Sbjct: 303 KLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGT 362
Query: 362 FCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 421
CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHW
Sbjct: 363 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 422
Query: 422 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKR 481
WIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKR
Sbjct: 423 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKR 482
Query: 482 LAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNP 541
L AVL++PK PRSL+QKIG+NQNLKPSEVI+DPEA TSED+LIK+FM+QDL+KVLDSL
Sbjct: 483 LMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGT 542
Query: 542 RERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS 587
RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Sbjct: 543 REKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVA 570
BLAST of MS007895 vs. TAIR 10
Match:
AT2G36990.1 (RNApolymerase sigma-subunit F )
HSP 1 Score: 246.9 bits (629), Expect = 4.0e-65
Identity = 152/411 (36.98%), Postives = 231/411 (56.20%), Query Frame = 0
Query: 176 ESERADIIGVPVGVNNRPAEGDALQHDT---AESDYTDPTTEELELLQDELSNIAVRSRR 235
++E D++ + + + L DT + D + + E NI VRS+R
Sbjct: 134 DAELCDVVALAQKALSASKQAALLVDDTEANPSDNIKDSLSTSSSMSLPEKGNI-VRSKR 193
Query: 236 QTERRAKRTRAAEKIATSVVSVKSGSSSRKKRNSVQEVDYSDPLRYLRATTSNSRLLTAT 295
Q ERRAK RA + +S KK+ Q D D L+ +LLTA
Sbjct: 194 QLERRAKNRRAPKSNDVDDEGYVPQKTSAKKKYK-QGADNDDALQLFLWGPETKQLLTAK 253
Query: 296 EELELSEGIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKM 355
EE EL IQ LLKLE+++ +L + G EPT +WA A G++ L+ ++ G ++K+
Sbjct: 254 EEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKL 313
Query: 356 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 415
I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++
Sbjct: 314 ITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSI 373
Query: 416 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLM 475
RKS+ SRTIRLP ++ +V EARK E P EE+A G+S ++L +L
Sbjct: 374 RKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLY 433
Query: 476 TPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDSLNPRERQVI 535
+ P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+ER++I
Sbjct: 434 NTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRII 493
Query: 536 RWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 584
+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Sbjct: 494 KLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAY 542
BLAST of MS007895 vs. TAIR 10
Match:
AT3G53920.1 (RNApolymerase sigma-subunit C )
HSP 1 Score: 210.7 bits (535), Expect = 3.2e-54
Identity = 126/380 (33.16%), Postives = 230/380 (60.53%), Query Frame = 0
Query: 212 TTEELELLQDELSNIAVRSRRQTERRAKRTRAAEKIATSVVSVKSGSSS------RKKRN 271
TTE ++ ++ + V SRR+ +++A+R S V+ ++G S R N
Sbjct: 206 TTELVDTTPNQ--QVFVSSRRKVKKKARR---------SSVTAENGDQSSLPIGLRTTWN 265
Query: 272 SVQEVDYSDPLRYLRATTSNSRLLTATEELELSEGIQDLLKLERLQEELRERYGKEPTFA 331
++ P +Y + SR E E+S G++ + +ER++ +L E GK + +
Sbjct: 266 NIDVPRVRRPPKYRKKRERISR-----NETEMSTGVKIVADMERIRTQLEEESGKVASLS 325
Query: 332 QWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 391
WAAAAG+N++ L + L+YG +C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+
Sbjct: 326 CWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGV 385
Query: 392 VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 451
++GAE+FD ++G+KFSTY +WI++++ +S +R + +P ++ +++ARK L +
Sbjct: 386 LQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKT 445
Query: 452 ENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETS 511
+G ++ DEEIA+ G S+K++ A K S+++K+G K E D E+
Sbjct: 446 SHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESP 505
Query: 512 EDLLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIE 571
E+ +++Q ++D+ +L+ L PRE+QV+ R+G++D R K+L+EIG+++ VS+E IR+IE
Sbjct: 506 EEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIE 565
Query: 572 SCAFRKLKNKKRTKHLQQYL 585
A KL+++ + L+ YL
Sbjct: 566 RRAMAKLRDQPNAEDLRYYL 569
BLAST of MS007895 vs. TAIR 10
Match:
AT5G13730.1 (sigma factor 4 )
HSP 1 Score: 183.0 bits (463), Expect = 7.1e-46
Identity = 108/303 (35.64%), Postives = 174/303 (57.43%), Query Frame = 0
Query: 284 SNSRLLTATEELELSEGIQDLLKLERLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLN 343
S S L+ EE++L +++ KLE L + E E A+ G +R+ + L
Sbjct: 118 SRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEE---NEMVSVLLASGRGKKKRSANEILC 177
Query: 344 YGTFCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 403
++K+ + RLV+SIA YQG G+NLQDL+QEG GL+RGAE+FD +G+K STY
Sbjct: 178 RRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTY 237
Query: 404 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLS 463
+WWIKQA+ ++++ +SR ++LP M E T +V EA L + R P EEIAE L+
Sbjct: 238 VYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLN 297
Query: 464 MKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETSEDLLIKQFMKQDLEKVLDS 523
+ + + ++P SL++ N + E++ P+ E+++ ++ MK ++E++L S
Sbjct: 298 VSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGS 357
Query: 524 LNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY 583
L RE +V+ FG+ + +EIG+ + +SRER+RQI A +KL+N L+ Y
Sbjct: 358 LTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 417
Query: 584 LMS 587
S
Sbjct: 418 YSS 417
BLAST of MS007895 vs. TAIR 10
Match:
AT1G64860.1 (sigma factor A )
HSP 1 Score: 156.4 bits (394), Expect = 7.2e-38
Identity = 138/467 (29.55%), Postives = 237/467 (50.75%), Query Frame = 0
Query: 151 SSKTGKKSQSSSKSDALHFKWDQFMESERADIIGVPVGVNNRPAEGDALQHDTAESDYTD 210
S+K+G ++ +S ++ +S +A V V +P + + E Y D
Sbjct: 44 STKSGITAKKASNYSPSFPSSNRHTQSAKALKESVDVASTEKPWLPNGTDKELEEECYDD 103
Query: 211 P-----TTEELELLQDELS----NIAVRSRRQTERRAKRTRAAEKIATSVVSVKSGSSSR 270
+ E + LLQ + N++ +E K T +KI V SG S+R
Sbjct: 104 DDLISHSVEAILLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIP---VITCSGISAR 163
Query: 271 KKR------------NSVQEVDYSDPLR-YLRATTSNSRLLTATEELELSEGIQDLLKLE 330
++R +V +V +R Y++ S +L+ E + LS+ I+ L+L+
Sbjct: 164 QRRIGAKKKTNMTHVKAVSDVSSGKQVRGYVKGVISED-VLSHVEVVRLSKKIKSGLRLD 223
Query: 331 RLQEELRERYGKEPTFAQWAAAAGVNQRTLRKRLNYGTFCKDKMIKSNIRLVISIAKNYQ 390
+ L++R G EP+ Q A + +++ L+ L ++K+ SN+RLV+SIA+ Y
Sbjct: 224 DHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYD 283
Query: 391 GAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 450
G + DLVQ G GL+RG EKFD+SKGF+ STY +WWI+Q V ++L D SRT+RLP H
Sbjct: 284 NLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTH 343
Query: 451 MVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQ 510
+ E ++ A+ +L E G P + IAE+ +S K++ SL++ +
Sbjct: 344 LHERLGLIRNAKLRL-QEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSL 403
Query: 511 NLKPSEV----ISDPEAETS-----EDLLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGM 570
N P E I+D E + +DL +K+++ K++ +L RE+++IR +G+
Sbjct: 404 NGLPGETHHSYIADTRLENNPWHGYDDLA----LKEEVSKLISATLGEREKEIIRLYYGL 463
Query: 571 EDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM 586
D T ++I + +G+SRER+RQ+ A KLK+ R + ++ ++
Sbjct: 464 -DKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMIL 500
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022155781.1 | 0.0e+00 | 99.83 | RNA polymerase sigma factor sigB [Momordica charantia] | [more] |
XP_038875580.1 | 1.8e-280 | 89.63 | RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | [more] |
XP_004154029.1 | 3.7e-278 | 88.93 | RNA polymerase sigma factor sigB [Cucumis sativus] >KGN46260.1 hypothetical prot... | [more] |
XP_008460092.1 | 1.8e-277 | 88.76 | PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo] | [more] |
XP_022964550.1 | 2.5e-274 | 87.54 | RNA polymerase sigma factor sigB [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
O22056 | 4.9e-185 | 62.83 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV... | [more] |
P26683 | 7.6e-77 | 46.39 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT... | [more] |
P38023 | 6.0e-74 | 42.08 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / ... | [more] |
P52322 | 6.5e-68 | 40.71 | RNA polymerase sigma factor SigA OS=Microcystis aeruginosa OX=1126 GN=sigA PE=3 ... | [more] |
P74565 | 1.0e-65 | 39.51 | RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa)... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DSR7 | 0.0e+00 | 99.83 | RNA polymerase sigma factor OS=Momordica charantia OX=3673 GN=LOC111022820 PE=3 ... | [more] |
A0A0A0K917 | 1.8e-278 | 88.93 | RNA polymerase sigma factor OS=Cucumis sativus OX=3659 GN=Csa_6G078550 PE=3 SV=1 | [more] |
A0A1S3CD00 | 8.8e-278 | 88.76 | RNA polymerase sigma factor OS=Cucumis melo OX=3656 GN=LOC103499006 PE=3 SV=1 | [more] |
A0A6J1HL45 | 1.2e-274 | 87.54 | RNA polymerase sigma factor sigB OS=Cucurbita moschata OX=3662 GN=LOC111464542 P... | [more] |
A0A6J1KM29 | 2.7e-274 | 87.88 | RNA polymerase sigma factor OS=Cucurbita maxima OX=3661 GN=LOC111494519 PE=3 SV=... | [more] |