![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS007879 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAAATGCGGCATCAACATATAATATTCTAAATGAGGAAGGTAGAATTGTGGCTGCAGCGCTTCTGCCCTATGGAGTTTCTTCA AGAAATGCGGCATCAACATATAATATTCTAAATGAGGAAGGTAGAATTGTGGCTGCAGCGCTTCTGCCCTATGGAGTTTCTTCA AGAAATGCGGCATCAACATATAATATTCTAAATGAGGAAGGTAGAATTGTGGCTGCAGCGCTTCTGCCCTATGGAGTTTCTTCA RNAASTYNILNEEGRIVAAALLPYGVSS Homology
BLAST of MS007879 vs. NCBI nr
Match: MBA0601203.1 (hypothetical protein [Gossypium raimondii]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. NCBI nr
Match: XP_016177092.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Arachis ipaensis] >XP_025677778.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Arachis hypogaea] >QHN76518.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor [Arachis hypogaea] >RYQ88121.1 hypothetical protein Ahy_B09g095521 isoform A [Arachis hypogaea]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. NCBI nr
Match: XP_015947655.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Arachis duranensis] >XP_025636607.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Arachis hypogaea] >QHO51764.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor [Arachis hypogaea] >RYR75339.1 hypothetical protein Ahy_A02g009995 [Arachis hypogaea]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. NCBI nr
Match: MBA0814548.1 (hypothetical protein [Gossypium harknessii] >MBA0842222.1 hypothetical protein [Gossypium armourianum]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. NCBI nr
Match: XP_006464343.1 (uncharacterized protein LOC102631083 isoform X1 [Citrus sinensis] >XP_024044844.1 uncharacterized protein LOC18049741 isoform X1 [Citrus clementina] >XP_024044845.1 uncharacterized protein LOC18049741 isoform X1 [Citrus clementina]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. ExPASy TrEMBL
Match: A0A5D2CYA7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Gossypium darwinii OX=34276 GN=ES288_D04G087300v1 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. ExPASy TrEMBL
Match: A0A5J5RT76 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Gossypium barbadense OX=3634 GN=ES319_D04G081400v1 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. ExPASy TrEMBL
Match: V4VZ28 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Citrus clementina OX=85681 GN=CICLE_v10022551mg PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. ExPASy TrEMBL
Match: A0A444XEE8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Arachis hypogaea OX=3818 GN=Ahy_B09g095521 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. ExPASy TrEMBL
Match: A0A067H377 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Citrus sinensis OX=2711 GN=CISIN_1g030786mg PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-05 Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) ) HSP 1 Score: 56.2 bits (134), Expect = 4.8e-09 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0
BLAST of MS007879 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) ) HSP 1 Score: 55.8 bits (133), Expect = 6.3e-09 Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|