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MS007871 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGTGCGAGAATGGGCGTCTGGAATGCGTTCTTTTCGACATCGATGGAACGCTCTGCGATTCCGATCCTCTCCATTTCTCCGCCTTCCGTCAATGCCTTCTTCAGGTCCGCCGTCGCCCTCATTTTTATCTTTTAATTACTTTTTTCATGTTTTTATTTTGCCTAAATAATTAATATAATATACCCAATGCTCTTTAATCTTTTAGAATTCTCAATTTTGTTCATAATGTGATTGAAATTTTCAATTAGGAAGAAATGGATTTTATCTTAGTGATTTGTGAGTAGGATTTTGGTTTGAATAGGTTTGGTTTCGGGTATGTTAATGAATCGATGATATGTTAACTTTTTTTTCTTCTTTTGTTAAGGACCTAATTGAGAATTTTAATGTATTAACTTATTAAGGGTTAAAAAATACCACTGATGATTTAGTCTATGAACATATATAGTTTAAAAGTTATAACAATTTAGACTGTGAAAAAATTTATTAAAATTAAGTGTCAAGTTTTATTATATAACAATTTAATTATTCTTCAATCACTATATATATAAGAATCTTAAAAAAAAAAAAAAAATTACATGACTAAATCGTTACAAACTTTAAATTATTACATTTTAAAATTTTTGAGACTAAATTATTAAAAAGTACAGAAATTAAATGGTTACAAACTGAATTTCAAAGACTAAATCGTTACAAACTAAAATTCATGAACTAAATGGTTATTTTAGCAATAGGGACCAAAAGTGATTTTTAACTATATTAAGAGTAGAAATTGAGAAGTTTAAAAGATTAAGTACTCAATTAAAAAATGGACTGTCTCGTATATTTAGATTATTATTTTTAATTAGTGAAATAATGTTTTTAGGATTTTTTCTAAAGTGCTTTAAGAAACTTAAGTTTAACTTTTAACTTCTAATTTTATTAAATTTGTGAAATTAATAATAGTTTCAAAATTAAATTAGTAGTATGAGGAAAAAAAACATTATTCTAAACGTGACTATGTATTAACCTACTAAAAACTAATGCCACTATATAATAAAACAGGAATAATACTTGACGGCTAATTCACTTGTCAATATTTATTATATTCATTAGACTTACCACCATTCAAAATTTGAGAGATTTTTAATATCTTTAAAAAGCGGAAAATATATCTCTTTTATTTTTCTATCTTTTTTTATTGGTAAAAAATTTAATAGTGGTCAATAATTGACGCTTAATTATTATTCATAAAATAGAATCATAAAAACATTTAAAATCAGCAAACCACATTGTTGACGGCGATTTTTGGTAGAGGCCCACGTGGTACTGGACAAGCAGTCCGGCCTAGGATCCACTAGACCTGAAACCAAAGAATTCGATGCCGGTACGATATCCTGCCTAGCCTAATATACTCCGACGATCAAGTATTAGAATATTAGTAAAAAAAATACCTCAAGTGTTAGTGACAGGTTTTTCACTTACTTGGTGAGGATGGTGGTTCTTCTTTTTATAGCCTCGTTGGGCCAACCAGGAAGGACAATGATTGGAGGTGACAGGGACGTTGCACACTATACGACTGGACAGAAGGAAATGCGGTTCCGACAGTAGCAGCCACCTGTGCCTCCTGGGTATGTTGCCTAGGGCTGCGGAATGTTCCCGTTATACCGACAGCGTGCATTGTCAGCTGTGGCCGTGTATGAGACGTAACCGTTTACAGTCCTTCGTCCCCTCTCGAGCGGATGTGTTTCCTGCTCGACAATATCCTCTCTGAGAAGGTGGTTCTCCGTGGACCCAAGCTTGTGGAGGAGCGGATGCGTGTCCTGTTTGGACACTACCCATAACACACATTTTTTTTTTGTTGTGAACTATTTACAACAATAAACATCCCAAAAAAAAATGTTGTTTATATACTTTTGTAAAAAATCTTCTTGTTAAAAATTTCCTTAATATCTAACAAAATAAGAACAATTATTTTGATGTAGGTTGGATTCAACAATGGAGTCCCAATCAATGAAGAATTCTTCGTAGAGAACATAAGTGGGAGACACAATGAGGACCTTTGTGGCATTCTCCTACCAAATTGGGACCTACCCAAAGCTAGAAAGTTTCTTGAAGATAAAGAAGCCTATTTTTGCAGGTATTTAAACTTCATCCCCCATGTCGCTTATGAACGGAAATGAAGGAATGAGAATCATTTTCGCTCGTTTTTATTCTTGGGTATGTTTCTTTTTCTTACTAAAAATTTATACGAAAATGTAGGTTATAAAAAACTGACTGAATCAATACAATGTAACTACTATAACCATCCCACCATTACCCATTGAAAATGATCGTCTCTAGTTCGTTTAGCCATTCCCTTCAATCTCAATTTTTGGTCTATTTGATTTCAAAATATTCATTTTGATTCCTGTAGCTTCAATTTTGGTTCATTTTAGATTATATACTTTCAAAATTATATTTGATCCATATTTACAAAATGTTAAAACAAAATTTATACACTACATTGAAAACTATTTAATATAAATTTATGGTCTCGTTTCAAACTTAGTGAGGGAAAAGTTAAATGAGATGAAAATAAAAATGGTGGAATACAATTTTAGTCTGTGAATTTAAGGATAGATCTCTATTTGATCCCTAGTTTTTAAAAAGTAATAGTTTGGTTTCGACTTTTAGAAAATAGTTATAAAAGATTTTGAAGTAAAGATTGACGGCCAACGGTCACTTTTTGAAATTTATGATAACCTATCTTCAAACTTACAGATTGAAAATGTATTTTACCCGAACAAAAACGAAATTAGAAGTATAAAACAGTACTAAAGTAAACAAAATTTAAAAGTATCGATACTCCTATCTAAACACATGGTGTCCACCAGACTGGCAGCAGAGGAGCTGGAAGCCATTGAAGGGCTGGAGAAGGTGTGCAAGTGGATAGAGGCGCGTGGGGTAAAACGCGCCGCCGTGACAAACGCCCCACGGCGGAACGCGGAGCTGATCCTGTCGATGTTGGGACTTGCAAATTTCTTTGAGGCGGTGGTTATAGGCAGCGAATGCCAGCGAGCAAAGCCATTTCCTGATCCCTACTTGAATGCTCTTCAAGAACTTGGAGCCTCCCCTCAAAATTCTTTTGTCTTTGAGGTAATTTATTTTTATTTTTTCTCACTACTCTCAAATTTTATTAACTCAATGACCATGACATAATGTCGAGGTCTCAATTTTACGGATATATCAATGAAAATATAGATAAGATATCAATGTCGATGGATATTTCTAGAAAGGTTATAAGGGTAAAAATATTTCAGTTAACAAATAAGTATTTAAGTTGTTCTAAACAAGTTAAAAATGATTATGATTAATATTAATATTATGTCTATATTGGTGATTTTTTTTATACATTTAATATTTTATTGATTCTTTTAAATAATATGGAAATGTCGATTTACTTGTCATGTTGATGTTGAATCGATGGATATATGGAAATGTCGACATGTCGACGGATGTTTAATATTATACTCACTCTAACTATTTTTTTAAAATAAATAAATAATTAAAAACTAAAAAATTATGAGGGAGGTGAGTATTAAAGTAATGACCTTTAGAACGGTAATAAGTGCCTTAACGGATTGATTTCAAAATAGTAACTACATGGAGTACTTGTCGGAGACAAACATACCCTCTCCACCTTTCGCATTGATATGATATGATATTGTCCATTTTAGGCATTAATTCTGATTTTAGGCTTTGCTTCAAAATGTCTCATACCAATAGAGATGTCTCTCGTTAATATACTCGTAATCTTCCTCTGATTTTCTCCTTATCTAGTCGATACGAGATTTTTTGGTCGCATTTCCGACCGGACTAAATTGATTATTTATTTATTTGGATGATTTTTGTGTTTGGGAATAGGACTCAGTATCAGGAGTGAAAGCAGGAGTGGGAGGTGGAATGAAAGTGGTGGGTGTGGGAAGAAGAAATCCTCAAGAGTTGCTGATGAAGGCTGGAGCCAGTTTTGTGATTAGGGATTTCAATGATCCA TTGTGCGAGAATGGGCGTCTGGAATGCGTTCTTTTCGACATCGATGGAACGCTCTGCGATTCCGATCCTCTCCATTTCTCCGCCTTCCGTCAATGCCTTCTTCAGGTTGGATTCAACAATGGAGTCCCAATCAATGAAGAATTCTTCGTAGAGAACATAAGTGGGAGACACAATGAGGACCTTTGTGGCATTCTCCTACCAAATTGGGACCTACCCAAAGCTAGAAAGTTTCTTGAAGATAAAGAAGCCTATTTTTGCAGACTGGCAGCAGAGGAGCTGGAAGCCATTGAAGGGCTGGAGAAGGTGTGCAAGTGGATAGAGGCGCGTGGGGTAAAACGCGCCGCCGTGACAAACGCCCCACGGCGGAACGCGGAGCTGATCCTGTCGATGTTGGGACTTGCAAATTTCTTTGAGGCGGTGGTTATAGGCAGCGAATGCCAGCGAGCAAAGCCATTTCCTGATCCCTACTTGAATGCTCTTCAAGAACTTGGAGCCTCCCCTCAAAATTCTTTTGTCTTTGAGGACTCAGTATCAGGAGTGAAAGCAGGAGTGGGAGGTGGAATGAAAGTGGTGGGTGTGGGAAGAAGAAATCCTCAAGAGTTGCTGATGAAGGCTGGAGCCAGTTTTGTGATTAGGGATTTCAATGATCCA TTGTGCGAGAATGGGCGTCTGGAATGCGTTCTTTTCGACATCGATGGAACGCTCTGCGATTCCGATCCTCTCCATTTCTCCGCCTTCCGTCAATGCCTTCTTCAGGTTGGATTCAACAATGGAGTCCCAATCAATGAAGAATTCTTCGTAGAGAACATAAGTGGGAGACACAATGAGGACCTTTGTGGCATTCTCCTACCAAATTGGGACCTACCCAAAGCTAGAAAGTTTCTTGAAGATAAAGAAGCCTATTTTTGCAGACTGGCAGCAGAGGAGCTGGAAGCCATTGAAGGGCTGGAGAAGGTGTGCAAGTGGATAGAGGCGCGTGGGGTAAAACGCGCCGCCGTGACAAACGCCCCACGGCGGAACGCGGAGCTGATCCTGTCGATGTTGGGACTTGCAAATTTCTTTGAGGCGGTGGTTATAGGCAGCGAATGCCAGCGAGCAAAGCCATTTCCTGATCCCTACTTGAATGCTCTTCAAGAACTTGGAGCCTCCCCTCAAAATTCTTTTGTCTTTGAGGACTCAGTATCAGGAGTGAAAGCAGGAGTGGGAGGTGGAATGAAAGTGGTGGGTGTGGGAAGAAGAAATCCTCAAGAGTTGCTGATGAAGGCTGGAGCCAGTTTTGTGATTAGGGATTTCAATGATCCA LCENGRLECVLFDIDGTLCDSDPLHFSAFRQCLLQVGFNNGVPINEEFFVENISGRHNEDLCGILLPNWDLPKARKFLEDKEAYFCRLAAEELEAIEGLEKVCKWIEARGVKRAAVTNAPRRNAELILSMLGLANFFEAVVIGSECQRAKPFPDPYLNALQELGASPQNSFVFEDSVSGVKAGVGGGMKVVGVGRRNPQELLMKAGASFVIRDFNDP Homology
BLAST of MS007871 vs. NCBI nr
Match: XP_022155747.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Momordica charantia]) HSP 1 Score: 448.4 bits (1152), Expect = 3.6e-122 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of MS007871 vs. NCBI nr
Match: KAG6593725.1 (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101 Identity = 178/214 (83.18%), Postives = 194/214 (90.65%), Query Frame = 0
BLAST of MS007871 vs. NCBI nr
Match: XP_023000617.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita maxima]) HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101 Identity = 178/214 (83.18%), Postives = 195/214 (91.12%), Query Frame = 0
BLAST of MS007871 vs. NCBI nr
Match: XP_038906797.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Benincasa hispida]) HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100 Identity = 179/217 (82.49%), Postives = 198/217 (91.24%), Query Frame = 0
BLAST of MS007871 vs. NCBI nr
Match: XP_023514863.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100 Identity = 178/214 (83.18%), Postives = 193/214 (90.19%), Query Frame = 0
BLAST of MS007871 vs. ExPASy Swiss-Prot
Match: Q9ZVJ5 (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana OX=3702 GN=SGPP PE=1 SV=2) HSP 1 Score: 256.9 bits (655), Expect = 2.0e-67 Identity = 115/211 (54.50%), Postives = 165/211 (78.20%), Query Frame = 0
BLAST of MS007871 vs. ExPASy Swiss-Prot
Match: Q9X0Y1 (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_1254 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.4e-20 Identity = 64/213 (30.05%), Postives = 112/213 (52.58%), Query Frame = 0
BLAST of MS007871 vs. ExPASy Swiss-Prot
Match: Q84MD8 (Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana OX=3702 GN=FHY PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.9e-13 Identity = 60/211 (28.44%), Postives = 99/211 (46.92%), Query Frame = 0
BLAST of MS007871 vs. ExPASy Swiss-Prot
Match: P77475 (Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) OX=83333 GN=yqaB PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.9e-13 Identity = 56/195 (28.72%), Postives = 86/195 (44.10%), Query Frame = 0
BLAST of MS007871 vs. ExPASy Swiss-Prot
Match: O33513 (Protein CbbY OS=Rhodobacter capsulatus OX=1061 GN=cbbY PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.2e-12 Identity = 52/196 (26.53%), Postives = 92/196 (46.94%), Query Frame = 0
BLAST of MS007871 vs. ExPASy TrEMBL
Match: A0A6J1DQ68 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Momordica charantia OX=3673 GN=LOC111022793 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.8e-122 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of MS007871 vs. ExPASy TrEMBL
Match: A0A6J1KE49 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Cucurbita maxima OX=3661 GN=LOC111494856 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 7.7e-102 Identity = 178/214 (83.18%), Postives = 195/214 (91.12%), Query Frame = 0
BLAST of MS007871 vs. ExPASy TrEMBL
Match: A0A5D3DLZ2 (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00840 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100 Identity = 178/216 (82.41%), Postives = 196/216 (90.74%), Query Frame = 0
BLAST of MS007871 vs. ExPASy TrEMBL
Match: A0A1S3CB79 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498987 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100 Identity = 178/216 (82.41%), Postives = 196/216 (90.74%), Query Frame = 0
BLAST of MS007871 vs. ExPASy TrEMBL
Match: A0A6J1HHQ5 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Cucurbita moschata OX=3662 GN=LOC111464435 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.2e-100 Identity = 176/214 (82.24%), Postives = 192/214 (89.72%), Query Frame = 0
BLAST of MS007871 vs. TAIR 10
Match: AT2G38740.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68 Identity = 115/211 (54.50%), Postives = 165/211 (78.20%), Query Frame = 0
BLAST of MS007871 vs. TAIR 10
Match: AT4G21470.1 (riboflavin kinase/FMN hydrolase ) HSP 1 Score: 76.3 bits (186), Expect = 3.5e-14 Identity = 60/211 (28.44%), Postives = 99/211 (46.92%), Query Frame = 0
BLAST of MS007871 vs. TAIR 10
Match: AT1G56500.1 (haloacid dehalogenase-like hydrolase family protein ) HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14 Identity = 60/220 (27.27%), Postives = 98/220 (44.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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