MS007788 (gene) Bitter gourd (TR) v1

Overview


Name	MS007788
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Plant self-incompatibility protein S1 family
Location	scaffold13: 1236531 .. 1236914 (-)
RNA-Seq Expression	MS007788
Synteny	MS007788

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGTTGTTGTTACCCGTCAGCCTACACGCCACTGATGAATTGATCGCAACTCCAAAACAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGGCGTTCACTGCAGATCCAAAGAAGACGATTTGGGAGTCCATATCATAGAGGCGGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAAACGACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCATCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGTTGCAGATGGCTCATTTATACAAGTGGACCCTGTTATCAACACATAGATTCTCCCTCTCTTACTTGCTATCCTTGGGACAAG

mRNA sequence

TTGTTGTTGTTGTTACCCGTCAGCCTACACGCCACTGATGAATTGATCGCAACTCCAAAACAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGGCGTTCACTGCAGATCCAAAGAAGACGATTTGGGAGTCCATATCATAGAGGCGGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAAACGACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCATCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGTTGCAGATGGCTCATTTATACAAGTGGACCCTGTTATCAACACATAGATTCTCCCTCTCTTACTTGCTATCCTTGGGACAAG

Coding sequence (CDS)

TTGTTGTTGTTGTTACCCGTCAGCCTACACGCCACTGATGAATTGATCGCAACTCCAAAACAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGGCGTTCACTGCAGATCCAAAGAAGACGATTTGGGAGTCCATATCATAGAGGCGGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAAACGACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCATCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGTTGCAGATGGCTCATTTATACAAGTGGACCCTGTTATCAACACATAGATTCTCCCTCTCTTACTTGCTATCCTTGGGACAAG

Protein sequence

LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPSLTCYPWDK

Homology

[Close]

BLAST of MS007788 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 9.8e-43
Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           + LLLP+SLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF
Sbjct: 11  MFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSF 70

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS 120
            F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC QH ++ S
Sbjct: 71  NFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLVYASGPCLQHSET-S 130

Query: 121 LTCYPWDK 129
           +TC+PW+K
Sbjct: 131 ITCFPWNK 135

[Close]

BLAST of MS007788 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 9.8e-43
Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           + LLLP+SLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF
Sbjct: 81  MFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSF 140

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS 120
            F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC QH ++ S
Sbjct: 141 NFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLVYASGPCLQHSET-S 200

Query: 121 LTCYPWDK 129
           +TC+PW+K
Sbjct: 201 ITCFPWNK 205

[Close]

BLAST of MS007788 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 7.0e-41
Identity = 83/128 (64.84%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           + LLLP+SL ATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF
Sbjct: 1   MFLLLPISLSATDELISLLPETTVAIVNEVG-GPLLGIHCRSKQDDLGVNVVSPDKSYSF 60

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS 120
            F  NIW TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWLIY SGPC QH    S
Sbjct: 61  NFGPNIWGTTLFYCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLIYASGPCLQH-SKTS 120

Query: 121 LTCYPWDK 129
           +TC+PW+K
Sbjct: 121 VTCFPWNK 125

[Close]

BLAST of MS007788 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.8e-37
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 13  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLF 72
           +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NIW TTLF
Sbjct: 70  NELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNIWGTTLF 129

Query: 73  YCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPSLTCYPWDK 129
           YC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC QH ++ S+TC+PW+K
Sbjct: 130 YCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLVYASGPCLQHSET-SITCFPWNK 182

[Close]

BLAST of MS007788 vs. NCBI nr
Match: EEF44294.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 111.7 bits (278), Expect = 4.7e-21
Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 20  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWV 79
           K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W 
Sbjct: 130 KRATVIITNDLNQGLDLSVHCKSKEDDLGVHILPPHNNYQFEFQPNFWGVTQFFCGFTWK 189

Query: 80  KGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDSPSLTCYPWDK 129
           K  IH F IY   RD PK C++C+W++   GPC ++   +    CY W+K
Sbjct: 190 KTGIHWFDIYIQNRDYPK-CSTCKWVLRQKGPCMFEEKTNNYTLCYDWNK 238

[Close]

BLAST of MS007788 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.0e-19
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 21  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVK 80
           + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W  
Sbjct: 27  RATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQW-D 86

Query: 81  GEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPSLTCYPW 127
            +   F IYD +RD    C  C+W I   GPC          C+PW
Sbjct: 87  SQFKSFDIYDAQRDQGI-CDDCQWEIKPDGPCRL---GKKAKCFPW 127

[Close]

BLAST of MS007788 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           LL+ +  S   TD  +       V I N L     L +HC+S +DDLG+ I+  + S+SF
Sbjct: 16  LLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSF 75

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHI 120
            F+T+I  TTLFYC F W  G+  +F IYD  RD  +    C +C W I   GPC +   
Sbjct: 76  KFRTSIVGTTLFYCHFTW-PGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSES 135

Query: 121 DSPSLTCYPWD 128
           D     CY W+
Sbjct: 136 DHAFNICYDWN 145

[Close]

BLAST of MS007788 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 5   LPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKT 64
           +P    +T+ +  T K+ TV I N+L     L  HC+SK+DDLG   ++  +S+SF+F  
Sbjct: 32  VPNDPSSTNSVFPTSKR-TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGR 91

Query: 65  NIWETTLFYCSFEWVKGEIHQFTIYDYKRDN--PKGCAS--CRWLIYTSGPCYQHIDSPS 124
             +  TL++CSF W   E H F IY   RD+     C S  C W I  +GPC  + ++  
Sbjct: 92  QFFGRTLYFCSFSW-PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQ 151

Query: 125 L-TCYPWDK 129
              CYPW+K
Sbjct: 152 FDLCYPWNK 158

[Close]

BLAST of MS007788 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-13
Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 24  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGE 83
           V I N L     L +HC+S +DDLG+ I+  + S+SF F+ +I    TLF+C F W  G+
Sbjct: 40  VTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTW-PGQ 99

Query: 84  IHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD 128
              F IYD  RD  +    C  C W I   GPC +  ID     CY W+
Sbjct: 100 SKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDWN 147

[Close]

BLAST of MS007788 vs. ExPASy Swiss-Prot
Match: B3H730 (S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.3e-12
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 20  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWV 79
           + + V I+N++     LG+HC+SK  DLG   +   + + FT   N+WETTLF+C F W 
Sbjct: 27  RHINVDIINDIGPNVQLGLHCKSKGKDLGPQSLAPHQHWGFTASLNVWETTLFFCHFVW- 86

Query: 80  KGEIHQFTIYDYKRDNPKGCA--SCRWLIYTSGPC 113
           + +   F I   KRD    C    C W I  SGPC
Sbjct: 87  ENQSRWFDILKEKRDTIV-CKYHPCVWSIRPSGPC 119

[Close]

BLAST of MS007788 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           + LLLP+SLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF
Sbjct: 11  MFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSF 70

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS 120
            F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC QH ++ S
Sbjct: 71  NFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLVYASGPCLQHSET-S 130

Query: 121 LTCYPWDK 129
           +TC+PW+K
Sbjct: 131 ITCFPWNK 135

[Close]

BLAST of MS007788 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 82/128 (64.06%), Postives = 104/128 (81.25%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           + LLLP+SLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF
Sbjct: 81  MFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSF 140

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS 120
            F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC QH ++ S
Sbjct: 141 NFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLVYASGPCLQHSET-S 200

Query: 121 LTCYPWDK 129
           +TC+PW+K
Sbjct: 201 ITCFPWNK 205

[Close]

BLAST of MS007788 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.4e-41
Identity = 83/128 (64.84%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           + LLLP+SL ATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF
Sbjct: 1   MFLLLPISLSATDELISLLPETTVAIVNEVG-GPLLGIHCRSKQDDLGVNVVSPDKSYSF 60

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS 120
            F  NIW TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWLIY SGPC QH    S
Sbjct: 61  NFGPNIWGTTLFYCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLIYASGPCLQH-SKTS 120

Query: 121 LTCYPWDK 129
           +TC+PW+K
Sbjct: 121 VTCFPWNK 125

[Close]

BLAST of MS007788 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 13  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLF 72
           +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NIW TTLF
Sbjct: 70  NELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNIWGTTLF 129

Query: 73  YCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPSLTCYPWDK 129
           YC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC QH ++ S+TC+PW+K
Sbjct: 130 YCVFEWVKGQPHYFTIYDFKRDG-KTCTNCRWLVYASGPCLQHSET-SITCFPWNK 182

[Close]

BLAST of MS007788 vs. ExPASy TrEMBL
Match: B9RWP2 (S-protein homolog OS=Ricinus communis OX=3988 GN=RCOM_1023130 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.3e-21
Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 20  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWV 79
           K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W 
Sbjct: 130 KRATVIITNDLNQGLDLSVHCKSKEDDLGVHILPPHNNYQFEFQPNFWGVTQFFCGFTWK 189

Query: 80  KGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDSPSLTCYPWDK 129
           K  IH F IY   RD PK C++C+W++   GPC ++   +    CY W+K
Sbjct: 190 KTGIHWFDIYIQNRDYPK-CSTCKWVLRQKGPCMFEEKTNNYTLCYDWNK 238

[Close]

BLAST of MS007788 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 21  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVK 80
           + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W  
Sbjct: 27  RATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQW-D 86

Query: 81  GEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPSLTCYPW 127
            +   F IYD +RD    C  C+W I   GPC          C+PW
Sbjct: 87  SQFKSFDIYDAQRDQGI-CDDCQWEIKPDGPCRL---GKKAKCFPW 127

[Close]

BLAST of MS007788 vs. TAIR 10
Match: AT1G26796.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-17
Identity = 47/117 (40.17%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 15  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYC 74
           L+ +PK   VII+N+L     L VHCR+K DDLGV  ++    + F F+ N+ +TT + C
Sbjct: 36  LLFSPKH--VIIINKLVTLATLIVHCRNKGDDLGVISLQHLARFHFRFRVNLRKTTKYTC 95

Query: 75  SFEWVKGEIHQFTIYDYKR-DNPKG----CASCRWLIYTSGPCYQHIDSPSLTCYPW 127
           SFEW  G    F I+   R DNP+     C+ C W IY   PC    D     C+PW
Sbjct: 96  SFEW-PGNTATFDIFRADRDDNPRSKYGVCSECIWSIYEPAPCRDRRDGGQPQCFPW 149

[Close]

BLAST of MS007788 vs. TAIR 10
Match: AT1G26799.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.7 bits (208), Expect = 5.8e-17
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 15  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYC 74
           L+ +PK   V+I N L     L VHC +KE DLG+  +    S+ F F+ N+ +TT + C
Sbjct: 36  LLFSPKH--VVIYNTLTSRATLVVHCVNKEKDLGIQKLPIGASFDFRFRVNLRKTTTYNC 95

Query: 75  SFEWVKGEIHQFTIYDYKRD----NPKG-CASCRWLIYTSGPCYQHIDSPSLTCYPWDK 129
           +FEW  G I +F I+   RD    +P G C  C W IY   PC +  D     C+ WD+
Sbjct: 96  TFEW-PGSIEKFDIFRADRDDNETSPIGICRECIWYIYEPAPCREKRDGGHSICFTWDR 151

[Close]

BLAST of MS007788 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-17
Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 1   LLLLLPVSLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSF 60
           LL+ +  S   TD  +       V I N L     L +HC+S +DDLG+ I+  + S+SF
Sbjct: 16  LLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSF 75

Query: 61  TFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHI 120
            F+T+I  TTLFYC F W  G+  +F IYD  RD  +    C +C W I   GPC +   
Sbjct: 76  KFRTSIVGTTLFYCHFTW-PGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSES 135

Query: 121 DSPSLTCYPWD 128
           D     CY W+
Sbjct: 136 DHAFNICYDWN 145

[Close]

BLAST of MS007788 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 21  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVK 80
           + TV+I N+L     L  HC+SK DDLG   +  + ++SF F+ +++  TLF+C F W K
Sbjct: 27  RTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIWDK 86

Query: 81  GEIHQFTIYDYKRDN---PKGCASCRWLIYTSGPCYQHIDSPSL-TCYPWD 128
            E+H F IY   RD      GC  C W I   GPC  + +S     C PW+
Sbjct: 87  -ELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPWN 136

The following BLAST results are available for this feature:

BLAST of MS007788 vs. NCBI nr


Match Name	E-value	Identity	Description
ABY56091.1	9.8e-43	64.06	self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility p...	[more]
ABY56092.1	9.8e-43	64.06	self-incompatibility protein 2 [Cucumis melo]	[more]
KAA0046095.1	7.0e-41	64.84	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0046284.1	2.8e-37	62.93	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
EEF44294.1	4.7e-21	46.36	conserved hypothetical protein [Ricinus communis]	[more]

BLAST of MS007788 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	6.0e-19	39.62	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q9FMQ4	1.1e-15	38.17	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLQ5	1.2e-14	37.21	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F4JZG1	8.4e-13	39.45	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
B3H730	9.3e-12	38.95	S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1	[more]

BLAST of MS007788 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B0F817	4.8e-43	64.06	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
B0F818	4.8e-43	64.06	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
A0A5A7TXE8	3.4e-41	64.84	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00...	[more]
A0A5A7TT98	1.3e-37	62.93	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00...	[more]
B9RWP2	2.3e-21	46.36	S-protein homolog OS=Ricinus communis OX=3988 GN=RCOM_1023130 PE=3 SV=1	[more]

BLAST of MS007788 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	4.3e-20	39.62	Plant self-incompatibility protein S1 family	[more]
AT1G26796.1	2.6e-17	40.17	Plant self-incompatibility protein S1 family	[more]
AT1G26799.1	5.8e-17	37.82	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	7.5e-17	38.17	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	4.9e-16	38.74	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 23..126 e-value: 1.3E-27 score: 96.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 14..126
None	No IPR available	PANTHER	PTHR31232:SF43	S-PROTEIN HOMOLOG 18-RELATED	coord: 14..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS007788.1	MS007788.1	mRNA